Factsheet for Zm00001d005528_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

cytosol 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 4
golgi 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG35311	Sorghum	plasma membrane	87.86	84.22
Zm00001d044564_P008	Maize	cytosol, peroxisome, plasma membrane	80.63	73.32
TraesCS3D01G362700.1	Wheat	cytosol, peroxisome, plasma membrane	77.22	72.63
TraesCS3B01G401600.3	Wheat	cytosol, peroxisome, plasma membrane	77.14	72.61
TraesCS3A01G369700.1	Wheat	peroxisome	77.14	72.5
Os01t0533900-01	Rice	endoplasmic reticulum, vacuole	49.96	71.98
Os01t0534700-00	Rice	plasma membrane	65.09	70.8
TraesCS5A01G495900.1	Wheat	plasma membrane	72.49	68.82
Zm00001d043762_P001	Maize	cytosol	64.84	61.27
Zm00001d011644_P002	Maize	plasma membrane	63.26	59.22
VIT_10s0003g02540.t01	Wine grape	plasma membrane	59.85	58.49
GSMUA_Achr2P20180_001	Banana	plasma membrane	47.3	58.36
Zm00001d009447_P002	Maize	plasma membrane	61.18	58.23
Zm00001d009448_P001	Maize	cytosol, peroxisome, plasma membrane	60.35	57.44
Bra012621.1-P	Field mustard	plasma membrane	59.1	57.02
VIT_10s0003g02550.t01	Wine grape	cytosol, nucleus, peroxisome	25.77	56.88
VIT_10s0003g02570.t01	Wine grape	plasma membrane	57.77	56.09
KRH11119	Soybean	plasma membrane	57.86	55.81
AT4G18050.2	Thale cress	plasma membrane	57.77	55.78
KRH21125	Soybean	plasma membrane	58.35	55.67
Solyc02g071350.2.1	Tomato	plastid	58.02	55.27
Zm00001d043766_P005	Maize	cytosol	58.69	55.24
PGSC0003DMT400007960	Potato	plasma membrane	57.86	55.15
CDY35168	Canola	golgi, peroxisome, plasma membrane	49.13	54.17
Zm00001d008178_P001	Maize	cytosol, peroxisome, plasma membrane, plastid	57.52	54.15
Solyc02g071340.1.1	Tomato	plasma membrane	56.36	53.68
VIT_10s0003g02580.t01	Wine grape	plasma membrane	56.36	53.6
AT5G46540.1	Thale cress	golgi	54.03	52.08
PGSC0003DMT400034908	Potato	plasma membrane	53.62	51.23
Zm00001d040562_P002	Maize	cytosol, peroxisome, plasma membrane	56.69	51.09
Solyc03g005860.2.1	Tomato	plasma membrane	52.87	50.52
Bra017539.1-P	Field mustard	plasma membrane	41.9	48.88
Zm00001d002119_P006	Maize	cytosol	43.56	41.39
Zm00001d026426_P005	Maize	cytosol	43.56	41.16
Zm00001d053706_P002	Maize	mitochondrion, plasma membrane	42.39	41.03
Zm00001d025590_P002	Maize	cytosol, nucleus, plasma membrane	42.81	40.46
Zm00001d051514_P002	Maize	mitochondrion	42.14	40.17
Zm00001d016794_P001	Maize	plasma membrane	41.81	40.05
Zm00001d031871_P001	Maize	cytosol	42.89	36.44
Zm00001d049565_P001	Maize	peroxisome	36.58	34.81
Zm00001d024600_P002	Maize	peroxisome	36.49	34.76
Zm00001d047780_P002	Maize	plasma membrane	36.82	31.35
Zm00001d041947_P001	Maize	cytosol, peroxisome, plasma membrane	36.49	31.25
Zm00001d028671_P002	Maize	cytosol, plasma membrane, vacuole	36.33	31.24
Zm00001d004442_P001	Maize	plastid	36.66	29.07

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.1	Gene3D:3.40.50.300	UniProt:A0A1D6ENM1	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom
InterPro:ABC1_TM_sf	InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085
InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640	ProteinID:ONM21390.1	InterPro:P-loop_NTPase	PFAM:PF00005
PFAM:PF00664	ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24221	PANTHER:PTHR24221:SF239
SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI0008444E5F	EnsemblPlantsGene:Zm00001d005528
EnsemblPlants:Zm00001d005528_P001	EnsemblPlants:Zm00001d005528_T001	SEG:seg	:	:	:

Description

ABC transporter B family member 9

Coordinates

chr2:+:177301062..177306292

Molecular Weight (calculated)

129237.0 Da

IEP (calculated)

6.717

GRAVY (calculated)

0.208

Length

1203 amino acids

Sequence
(BLAST)

0001: MATGEDEKAA GRVALHRLFV FADRTDAALM AVGAVAAVAN GMVQPIMAFI FGDVIDAFGS GATDGVVRRV VQVSCWTIAG ERQAARIRAM YLKAILRQDI
0101: AFFDMEMSAG QAVERMAGDT FLIQDAIGEK VGKAIQLLST FIGGFIIAFT RGWLLALVML SSVPPIAIAG AIVSKLMTGL STRMQANYSD AGNVVEQTLG
0201: AIRTVVSFNG ENQAITKYNM FIRKAYRSSL QEGAVNALGF GSVIAILFSS YGLAVWYGSK LIVERGYNGG MVISVIMSVM IGAMSLGQAT RSVTAFAEGQ
0301: GAAHRMFKII ERKPDIDIDD NTGIILEDVK GDVQLKDVYF SYPTRPEHLI FDGFSLQVQS GTTMALVGDS GSGKSTVISL VERFYDPQAG EVLIDGVDIR
0401: GMKLGWMRGK IGLVNQEPVL FSTTIRENIA YGTEKPTLED INRAIQLANA AIFIDKLPNG LDTMVGEHGT QLSGGQKQRI AIARAIIKNP KILLLDEATS
0501: ALDMESERVV QEALVRIMVE RTTIVVAHRL STVRNADVIS VLQHGKMVEQ GSHVDLMKLP GGAYTQLIRL HETQQEAEDV HPDMEISRRS TSKGSSSFGQ
0601: SIPAPLGSPD PTEVSGAPDT EEGATDRVKV GRSQKKASIA RLFKLNKPET LVLALGSIAA VAHGTIFPIY GTLISTAIKV FYEPPQELLK GSRFWAGMFA
0701: LLGACAFVLI PVQYFLFGLA GGKLVERIFI YLLTDTISLQ TCVSGSICAR LSTDALNVKR LVGDNLALNV QTASTIMSGF TIAMVANWKL ALVITVVIPF
0801: VAFQAYAQML FLKGLNRNAK LRYEEASQVA TDAVGGIRTV ASFCAESKVM DAYENKCESP RRQGMKEGVV GGLGFGFSFV VFYLTYALCF YVGARTVASQ
0901: VFFVLALATS GVSQTSAAGA DSAKANDSAV SIFAILDRES KIDYSSEEGV TIASVRGDVD FQKVCFKYPL RPNVQIFKDF SLRIPSGKTV ALVGESGSGK
1001: STVIALLERF YDPESGKIFI DGVELGTLKV SWLRQQAGLV AQEPVLFNDT IRANIAYGKQ GGVVSEEEVV AAAEAANAHG FIAALPDGYD TVVGERGSRL
1101: SGGQKQRVAI ARAVVKDPRL LLLDEATSAL DVESERVVQE ALDRVMVGRT TVVVAHRLST IRGADVIAVL KDGAVLEKGR HEELMQVKDG AYASLLELSS
1201: SSA

Best Arabidopsis Sequence Match ( AT2G47000.1 )
(BLAST)

0001: MASESGLNGD PNILEEVSET KRDKEEEEEV KKTEKKDEEH EKTKTVPFYK LFAFADSFDF LLMILGTLGS IGNGLGFPLM TLLFGDLIDA FGENQTNTTD
0101: KVSKVALKFV WLGIGTFAAA FLQLSGWMIS GERQAARIRS LYLKTILRQD IAFFDIDTNT GEVVGRMSGD TVLIQDAMGE KVGKAIQLLA TFVGGFVIAF
0201: VRGWLLTLVM LSSIPLLVMA GALLAIVIAK TASRGQTAYA KAATVVEQTI GSIRTVASFT GEKQAISNYN KHLVTAYKAG VIEGGSTGLG LGTLFLVVFC
0301: SYALAVWYGG KLILDKGYTG GQVLNIIIAV LTGSMSLGQT SPCLSAFAAG QAAAYKMFET IERRPNIDSY STNGKVLDDI KGDIELKDVY FTYPARPDEQ
0401: IFRGFSLFIS SGTTVALVGQ SGSGKSTVVS LIERFYDPQA GDVLIDGINL KEFQLKWIRS KIGLVSQEPV LFTASIKDNI AYGKEDATTE EIKAAAELAN
0501: ASKFVDKLPQ GLDTMVGEHG TQLSGGQKQR IAVARAILKD PRILLLDEAT SALDAESERV VQEALDRIMV NRTTVVVAHR LSTVRNADMI AVIHQGKIVE
0601: KGSHTELLKD PEGAYSQLIR LQEEKKSDEN AAEEQKMSSI ESFKQSSLRK SSLGRSLSKG GSSRGNSSRH SFNMFGFPAG IDGNVVQDQE EDDTTQPKTE
0701: PKKVSIFRIA ALNKPEIPVL ILGSISAAAN GVILPIFGIL ISSVIKAFFQ PPKKLKEDTS FWAIIFMVLG FASIIAYPAQ TFFFAIAGCK LVQRIRSMCF
0801: EKVVHMEVGW FDEPENSSGT IGARLSADAA TIRGLVGDSL AQTVQNLSSI LAGLIIAFLA CWQLAFVVLA MLPLIALNGF LYMKFMKGFS ADAKKMYGEA
0901: SQVANDAVGS IRTVASFCAE DKVMNMYSKK CEGPMKNGIR QGIVSGIGFG FSFFVLFSSY AASFYVGARL VDDGKTTFDS VFRVFFALTM AAMAISQSSS
1001: LSPDSSKADV AAASIFAIMD RESKIDPSVE SGRVLDNVKG DIELRHVSFK YPARPDVQIF QDLCLSIRAG KTVALVGESG SGKSTVIALL QRFYDPDSGE
1101: ITLDGVEIKS LRLKWLRQQT GLVSQEPILF NETIRANIAY GKGGDASESE IVSSAELSNA HGFISGLQQG YDTMVGERGI QLSGGQKQRV AIARAIVKDP
1201: KVLLLDEATS ALDAESERVV QDALDRVMVN RTTIVVAHRL STIKNADVIA VVKNGVIVEK GKHDTLINIK DGVYASLVQL HLTAAS

Arabidopsis Description

ABCB4ABC transporter B family member 4 [Source:UniProtKB/Swiss-Prot;Acc:O80725]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.