Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- peroxisome 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU79903 | Sorghum | peroxisome | 90.82 | 90.61 |
| HORVU0Hr1G015570.6 | Barley | endoplasmic reticulum, plasma membrane | 66.46 | 76.99 |
| TraesCS7A01G303100.1 | Wheat | peroxisome | 76.34 | 76.34 |
| TraesCS7D01G298400.1 | Wheat | peroxisome | 76.34 | 76.34 |
| TraesCS7B01G203300.1 | Wheat | peroxisome | 76.27 | 76.27 |
| TraesCS6B01G170700.1 | Wheat | plasma membrane | 75.55 | 76.16 |
| TraesCS6D01G131900.1 | Wheat | plasma membrane | 75.32 | 75.86 |
| Zm00001d024600_P002 | Maize | peroxisome | 63.37 | 63.42 |
| Solyc06g072960.1.1 | Tomato | peroxisome | 46.52 | 57.2 |
| VIT_16s0098g00570.t01 | Wine grape | cytosol, plasma membrane, vacuole | 53.72 | 57.15 |
| KRH53669 | Soybean | plasma membrane | 55.85 | 56.3 |
| PGSC0003DMT400069516 | Potato | peroxisome | 52.53 | 55.99 |
| Zm00001d002119_P006 | Maize | cytosol | 38.61 | 38.55 |
| Zm00001d051514_P002 | Maize | mitochondrion | 38.45 | 38.51 |
| Zm00001d053706_P002 | Maize | mitochondrion, plasma membrane | 37.74 | 38.37 |
| Zm00001d026426_P005 | Maize | cytosol | 38.61 | 38.33 |
| Zm00001d025590_P002 | Maize | cytosol, nucleus, plasma membrane | 38.45 | 38.18 |
| Zm00001d043762_P001 | Maize | cytosol | 37.03 | 36.76 |
| Zm00001d008178_P001 | Maize | cytosol, peroxisome, plasma membrane, plastid | 37.03 | 36.62 |
| Zm00001d005528_P001 | Maize | plasma membrane | 34.81 | 36.58 |
| Zm00001d043766_P005 | Maize | cytosol | 36.71 | 36.31 |
| Zm00001d016794_P001 | Maize | plasma membrane | 35.6 | 35.83 |
| Zm00001d011644_P002 | Maize | plasma membrane | 36.31 | 35.72 |
| Zm00001d009448_P001 | Maize | cytosol, peroxisome, plasma membrane | 35.68 | 35.68 |
| Zm00001d009447_P002 | Maize | plasma membrane | 35.6 | 35.6 |
| Zm00001d040562_P002 | Maize | cytosol, peroxisome, plasma membrane | 37.26 | 35.28 |
| Zm00001d044564_P008 | Maize | cytosol, peroxisome, plasma membrane | 36.79 | 35.15 |
| Zm00001d031871_P001 | Maize | cytosol | 37.74 | 33.69 |
| Zm00001d041947_P001 | Maize | cytosol, peroxisome, plasma membrane | 34.65 | 31.17 |
| Zm00001d028671_P002 | Maize | cytosol, plasma membrane, vacuole | 33.62 | 30.38 |
| Zm00001d047780_P002 | Maize | plasma membrane | 33.94 | 30.36 |
| Zm00001d004442_P001 | Maize | plastid | 32.91 | 27.42 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | UniProt:A0A1D6PW78 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom |
| InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ProteinID:AQK50818.1 | ncoils:Coil | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 |
| GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 |
| GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase |
| PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24221 |
| PANTHER:PTHR24221:SF218 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix | UniParc:UPI000842B4FD |
| EnsemblPlantsGene:Zm00001d049565 | EnsemblPlants:Zm00001d049565_P001 | EnsemblPlants:Zm00001d049565_T001 | SEG:seg | : | : |
Description
ABC transporter B family member 6
Coordinates
chr4:-:35419145..35424199
Molecular Weight (calculated)
138133.0 Da
IEP (calculated)
5.807
GRAVY (calculated)
0.144
Length
1264 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPAIQGKKDD KPSEEPSSIV ADGKQSAAAA AAEDGGSFPF FGLLRYADAL DWLLMVSGTV GSFVHGMGPS MSYYILGKTL DVVGSNMGDN EATVHELTKL
0101: IPYMWMLAVV TLPGGMIETA SWMYTSQRQM TRMRIAYLRS VLSQDIGAFD TDLTTASIMA GATNHMSVIQ DAIGEKMGHF MSNFSTFLVA IIVAFACCWE
0201: VGLLSLLVVP MLLMVGASYS KAMISMSLAR TSFVSEATAI VEQNLAHIKT VFSFVGEKSA IKSFSNCMDS QYALSKKESM VKGLGLGMLQ IATFCSYSLV
0301: IWVGAVAVTE GKAKPGETIA AVINVLSGAI YISNAAPDLQ AFSQAKVAGK EVFKVIKRTP AISYESKGKF LEKVTGDIEI REVHFTYPSR EDKPVLQGFS
0401: LAIQAGNILA LVGSSGCGKS TVISLVQRFY DPMSGVVLID GQDIKTLDLK FLRTNIGSVS QEPSLFSGTI MDNLRIGKID ATDEEIIEAA KTANVHSFIS
0501: NLPNQYATEV GERGLQLSGG QKQRIAIARA ILKDPPILLL DEATSALDSE SEKTVQEALD IAMQGRTVIL IAHRMSTIIG ADKIVLVENG TVAQSGTHEE
0601: LLEKSAFYSS VCSMQNLEKD SGKSKTRFVD EVKEEKEKEE SQEGIYNKLS FTSSEQEKTL ELTEQPKQAI RKRTSTFYRI FLRTFKLLPE KVLLGSIAAA
0701: ISGISRPVFA FYIMTVGVAY IKPDAKSIVS TYSVILFLIG LLTFFSNMFQ HYIYGLVGER ATNNLREALF SVILRNEIGW FEQPKNSVGF LTSRIVGDTS
0801: MIKTIISDRM SLIVQCISSI LIATVLSTVV NWRMGLVAWT LMPFHFFAGL VQVRSAKGFA TDFSASHREL ISLTSEAVSN IRTVASFVQE DEILKKADLS
0901: LQEPMRTSKV ESIKYGLVQG TSLCLWHMTH AIALSFTIML LDKNLSSFKD CVRSYQAFAM TISSITELWS LIPLVLSAIT VLDPALDILD RETQIVPDVP
1001: EVHSEERLAG DIVFQDVSFS YPSRPEVIIL DGFNLDIEPG QQVALVGPSG SGKTTVLALL LRFYDPCEGR VLVNDKDIRD YNLRYLRKHI GLVQQEPMLF
1101: NLSIRENISY GNEGASESEI VAAAMEANIH EFISGLSNGY DTVVGDKGSQ LSGGQKQRIA IARAILKRPT IMLLDEATSA LDGQSEMVVM SSLVAKEWRN
1201: NGELSSKITS ITIAHRLSTI TSAEVIVVMD KGQVVELGSH EALISAKDGV YSRLYSMQSK GVKD
0101: IPYMWMLAVV TLPGGMIETA SWMYTSQRQM TRMRIAYLRS VLSQDIGAFD TDLTTASIMA GATNHMSVIQ DAIGEKMGHF MSNFSTFLVA IIVAFACCWE
0201: VGLLSLLVVP MLLMVGASYS KAMISMSLAR TSFVSEATAI VEQNLAHIKT VFSFVGEKSA IKSFSNCMDS QYALSKKESM VKGLGLGMLQ IATFCSYSLV
0301: IWVGAVAVTE GKAKPGETIA AVINVLSGAI YISNAAPDLQ AFSQAKVAGK EVFKVIKRTP AISYESKGKF LEKVTGDIEI REVHFTYPSR EDKPVLQGFS
0401: LAIQAGNILA LVGSSGCGKS TVISLVQRFY DPMSGVVLID GQDIKTLDLK FLRTNIGSVS QEPSLFSGTI MDNLRIGKID ATDEEIIEAA KTANVHSFIS
0501: NLPNQYATEV GERGLQLSGG QKQRIAIARA ILKDPPILLL DEATSALDSE SEKTVQEALD IAMQGRTVIL IAHRMSTIIG ADKIVLVENG TVAQSGTHEE
0601: LLEKSAFYSS VCSMQNLEKD SGKSKTRFVD EVKEEKEKEE SQEGIYNKLS FTSSEQEKTL ELTEQPKQAI RKRTSTFYRI FLRTFKLLPE KVLLGSIAAA
0701: ISGISRPVFA FYIMTVGVAY IKPDAKSIVS TYSVILFLIG LLTFFSNMFQ HYIYGLVGER ATNNLREALF SVILRNEIGW FEQPKNSVGF LTSRIVGDTS
0801: MIKTIISDRM SLIVQCISSI LIATVLSTVV NWRMGLVAWT LMPFHFFAGL VQVRSAKGFA TDFSASHREL ISLTSEAVSN IRTVASFVQE DEILKKADLS
0901: LQEPMRTSKV ESIKYGLVQG TSLCLWHMTH AIALSFTIML LDKNLSSFKD CVRSYQAFAM TISSITELWS LIPLVLSAIT VLDPALDILD RETQIVPDVP
1001: EVHSEERLAG DIVFQDVSFS YPSRPEVIIL DGFNLDIEPG QQVALVGPSG SGKTTVLALL LRFYDPCEGR VLVNDKDIRD YNLRYLRKHI GLVQQEPMLF
1101: NLSIRENISY GNEGASESEI VAAAMEANIH EFISGLSNGY DTVVGDKGSQ LSGGQKQRIA IARAILKRPT IMLLDEATSA LDGQSEMVVM SSLVAKEWRN
1201: NGELSSKITS ITIAHRLSTI TSAEVIVVMD KGQVVELGSH EALISAKDGV YSRLYSMQSK GVKD
0001: MDNTERSSNG NIQAETEAKE EKKNIKKESV SLMGLFSAAD KLDYFLMLLG GLGACIHGAT LPLFFVFFGK MLDSLGNLST DPKAISSRVS QNALYLVYLG
0101: LVNFVSAWIG VSCWMQTGER QTARLRINYL KSILAKDITF FDTEARDSNL IFHISSDAIL VQDAIGDKTD HVLRYLSQFI AGFVIGFLSV WQLTLLTLGV
0201: VPLIAIAGGG YAIVMSTISE KSETAYADAG KVAEEVMSQV RTVYAFVGEE KAVKSYSNSL KKALKLGKRS GLAKGLGVGL TYSLLFCAWA LLLWYASLLV
0301: RHGKTNGAKA FTTILNVIFS GFALGQAAPS LSAIAKGRVA AANIFRMIGN NNSESSQRLD EGTTLQNVAG RIEFQKVSFA YPSRPNMVFE NLSFTIRSGK
0401: TFAFVGPSGS GKSTIISMVQ RFYEPNSGEI LLDGNDIKSL KLKWFREQLG LVSQEPALFA TTIASNILLG KENANMDQII EAAKAANADS FIKSLPNGYN
0501: TQVGEGGTQL SGGQKQRIAI ARAVLRNPKI LLLDEATSAL DAESEKIVQQ ALDNVMEKRT TIVVAHRLST IRNVDKIVVL RDGQVRETGS HSELMLRGGD
0601: YATLVNCQET EPQENSRSIM SETCKSQAGS SSSRRVSSSR RTSSFRVDQE KTKNDDSKKD FSSSSMIWEL IKLNSPEWPY ALLGSIGAVL AGAQTPLFSM
0701: GIAYVLTAFY SPFPNVIKRD VEKVAIIFAG AGIVTAPIYL LQHYFYTLMG ERLTSRVRLS LFSAILSNEI GWFDLDENNT GSLTSILAAD ATLVRSALAD
0801: RLSTIVQNLS LTVTALALAF FYSWRVAAVV TACFPLLIAA SLTEQLFLKG FGGDYTRAYS RATSVAREAI ANIRTVAAYG AEKQISEQFT CELSKPTKNA
0901: FVRGHISGFG YGLSQFLAFC SYALGLWYVS VLINHKETNF GDSIKSFMVL IVTAFSVSET LALTPDIVKG TQALGSVFRV LHRETKISPD QPNSRMVSQV
1001: KGDIEFRNVS FVYPTRPEID IFKNLNLRVS AGKSLAVVGP SGSGKSTVIG LIMRFYDPSN GNLCIDGQDI KTLNLRSLRK KLALVQQEPA LFSTTIYENI
1101: KYGNENASEA EIMEAAKAAN AHEFIIKMEE GYKTHAGDKG VQLSGGQKQR VAIARAVLKD PSVLLLDEAT SALDTSSEKL VQEALDKLMK GRTTVLVAHR
1201: LSTIRKADTV AVLHKGRVVE KGSHRELVSI PNGFYKQLTS LQEVL
0101: LVNFVSAWIG VSCWMQTGER QTARLRINYL KSILAKDITF FDTEARDSNL IFHISSDAIL VQDAIGDKTD HVLRYLSQFI AGFVIGFLSV WQLTLLTLGV
0201: VPLIAIAGGG YAIVMSTISE KSETAYADAG KVAEEVMSQV RTVYAFVGEE KAVKSYSNSL KKALKLGKRS GLAKGLGVGL TYSLLFCAWA LLLWYASLLV
0301: RHGKTNGAKA FTTILNVIFS GFALGQAAPS LSAIAKGRVA AANIFRMIGN NNSESSQRLD EGTTLQNVAG RIEFQKVSFA YPSRPNMVFE NLSFTIRSGK
0401: TFAFVGPSGS GKSTIISMVQ RFYEPNSGEI LLDGNDIKSL KLKWFREQLG LVSQEPALFA TTIASNILLG KENANMDQII EAAKAANADS FIKSLPNGYN
0501: TQVGEGGTQL SGGQKQRIAI ARAVLRNPKI LLLDEATSAL DAESEKIVQQ ALDNVMEKRT TIVVAHRLST IRNVDKIVVL RDGQVRETGS HSELMLRGGD
0601: YATLVNCQET EPQENSRSIM SETCKSQAGS SSSRRVSSSR RTSSFRVDQE KTKNDDSKKD FSSSSMIWEL IKLNSPEWPY ALLGSIGAVL AGAQTPLFSM
0701: GIAYVLTAFY SPFPNVIKRD VEKVAIIFAG AGIVTAPIYL LQHYFYTLMG ERLTSRVRLS LFSAILSNEI GWFDLDENNT GSLTSILAAD ATLVRSALAD
0801: RLSTIVQNLS LTVTALALAF FYSWRVAAVV TACFPLLIAA SLTEQLFLKG FGGDYTRAYS RATSVAREAI ANIRTVAAYG AEKQISEQFT CELSKPTKNA
0901: FVRGHISGFG YGLSQFLAFC SYALGLWYVS VLINHKETNF GDSIKSFMVL IVTAFSVSET LALTPDIVKG TQALGSVFRV LHRETKISPD QPNSRMVSQV
1001: KGDIEFRNVS FVYPTRPEID IFKNLNLRVS AGKSLAVVGP SGSGKSTVIG LIMRFYDPSN GNLCIDGQDI KTLNLRSLRK KLALVQQEPA LFSTTIYENI
1101: KYGNENASEA EIMEAAKAAN AHEFIIKMEE GYKTHAGDKG VQLSGGQKQR VAIARAVLKD PSVLLLDEAT SALDTSSEKL VQEALDKLMK GRTTVLVAHR
1201: LSTIRKADTV AVLHKGRVVE KGSHRELVSI PNGFYKQLTS LQEVL
Arabidopsis Description
ABCB13PGP13 [Source:UniProtKB/TrEMBL;Acc:A0A178W4F4]
SUBAcon: [peroxisome,vacuole,plasma membrane]
SUBAcon: [peroxisome,vacuole,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.