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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, nucleus, cytosol

Predictor Summary:
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • nucleus 1
PPI

Inferred distinct locusB in Crop

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES12287 Sorghum cytosol, peroxisome, plasma membrane 97.64 98.49
Os04t0459000-01 Rice plasma membrane 93.95 95.0
TraesCS2B01G341800.2 Wheat cytosol, peroxisome, plasma membrane 92.54 93.2
TraesCS2D01G322600.1 Wheat cytosol, peroxisome, plasma membrane 92.46 93.19
TraesCS2A01G344300.1 Wheat cytosol, peroxisome, plasma membrane 92.22 92.95
HORVU2Hr1G080200.1 Barley plasma membrane 92.07 92.5
GSMUA_Achr8P24160_001 Banana plasma membrane 79.03 89.26
VIT_14s0108g00430.t01 Wine grape cytosol, peroxisome, plasma membrane 84.13 85.68
KRH18485 Soybean endoplasmic reticulum, mitochondrion 83.35 84.95
PGSC0003DMT400003590 Potato plasma membrane 83.03 84.63
Solyc02g087870.2.1 Tomato plasma membrane 82.95 84.55
KRG93519 Soybean cytosol, peroxisome, plasma membrane 82.95 84.48
Zm00001d026426_P005 Maize cytosol 83.35 83.35
Zm00001d002119_P006 Maize cytosol 82.88 83.33
AT3G28860.1 Thale cress plasma membrane 81.07 82.43
Bra025359.1-P Field mustard plasma membrane 80.75 82.11
Bra039042.1-P Field mustard plasma membrane 80.68 82.03
CDX86408 Canola plasma membrane 79.58 81.89
CDY65012 Canola plasma membrane 80.6 81.88
CDY20012 Canola plasma membrane 80.52 81.8
CDY00109 Canola plasma membrane 79.97 81.77
GSMUA_Achr4P09980_001 Banana plasma membrane 72.03 80.16
Zm00001d051514_P002 Maize mitochondrion 48.55 48.97
Zm00001d031871_P001 Maize cytosol 52.0 46.75
Zm00001d053706_P002 Maize mitochondrion, plasma membrane 44.54 45.62
Zm00001d016794_P001 Maize plasma membrane 43.6 44.19
Zm00001d008178_P001 Maize cytosol, peroxisome, plasma membrane, plastid 43.6 43.43
Zm00001d005528_P001 Maize plasma membrane 40.46 42.81
Zm00001d009447_P002 Maize plasma membrane 42.11 42.41
Zm00001d009448_P001 Maize cytosol, peroxisome, plasma membrane 41.87 42.17
Zm00001d043762_P001 Maize cytosol 42.11 42.11
Zm00001d011644_P002 Maize plasma membrane 42.42 42.02
Zm00001d040562_P002 Maize cytosol, peroxisome, plasma membrane 43.75 41.72
Zm00001d044564_P008 Maize cytosol, peroxisome, plasma membrane 42.03 40.44
Zm00001d043766_P005 Maize cytosol 39.91 39.75
Zm00001d049565_P001 Maize peroxisome 38.18 38.45
Zm00001d024600_P002 Maize peroxisome 38.02 38.32
Zm00001d028671_P002 Maize cytosol, plasma membrane, vacuole 42.11 38.31
Zm00001d041947_P001 Maize cytosol, peroxisome, plasma membrane 42.18 38.22
Zm00001d047780_P002 Maize plasma membrane 41.87 37.72
Zm00001d004442_P001 Maize plastid 40.46 33.95
Protein Annotations
MapMan:11.2.4.3MapMan:24.1.3.1.1Gene3D:3.40.50.300UniProt:A0A1D6J7Y5InterPro:AAA+_ATPaseInterPro:ABC1_TM_dom
InterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSProteinID:AQK44058.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626
GO:GO:0055085InterPro:IPR003439InterPro:IPR011527InterPro:IPR036640InterPro:P-loop_NTPasePFAM:PF00005
PFAM:PF00664ScanProsite:PS00211PFscan:PS50893PFscan:PS50929PANTHER:PTHR24221PANTHER:PTHR24221:SF382
SMART:SM00382SUPFAM:SSF52540SUPFAM:SSF90123TMHMM:TMhelixUniParc:UPI000845591EEnsemblPlantsGene:Zm00001d025590
EnsemblPlants:Zm00001d025590_P002EnsemblPlants:Zm00001d025590_T002SEG:seg:::
Description
ABC transporter B family member 19
Coordinates
chr10:-:123321362..123327947
Molecular Weight (calculated)
137947.0 Da
IEP (calculated)
8.550
GRAVY (calculated)
0.158
Length
1273 amino acids
Sequence
(BLAST)
0001: MAEGDAGKAE AGSCSAAAAS GAGGCDAVKK RPEQSVAFHE LFGFADPLDW LLMAAGSAGA VVHGAAMPVF FLLFGELVNG FGKNQHNLRR MTDEVSKARI
0101: YSLYFVYLGL VVCASSYLEI ACWMYTGERQ VGALRRRYLE AVLRQDVGFF DTDARTGDVV FSVSTDTLLV QDAIGEKNNV CLQVGNFIHY LATFLAGLVV
0201: GFVSAWRLAL LSIAVIPGIA FAGGLYAYTL TGLTSKSRDS YANAGIIAEQ AIAQVRTVYS YVGETKALNS YSEAIQNTLK LGYKAGMAKG LGIGCTYGIA
0301: CMSWALVFWY AGVFIRNGQT DGGKAFTAIF SAIVGGLSLG QSFSNLGAFS KGKIAGYKLL EVIRQRPTIV QDTADGRCLD EVHGNIEFKE VAFSYPSRPD
0401: VMIFRDFSLF FPAGKTAAVV GGSGSGKSTV VALIERFYDP NQGQVLLDNV DIKTLQLKWL RDQIGLVNQE PALFATTILE NILYGKPDAT MAEVEAAATS
0501: ANAHSFIALL PNGYNTHVGD RGLQLSGGQK QRIAIARAML KNPKLLLLDE ATSALDAGSE SIVQEALDRL MVGRTTVVVA HRLSTIRCVD MIAVIQQGQV
0601: VETGTHDELL AKGSSGAYAA LIRFQETARN RACPSTRKSR SSRLSNSLST RSLSLRSGSL RNLSYSYSTG ADGRIEMVSN ADNDRKYPAP RGYFFKLLKL
0701: NAPEWPYTIL GAVGSVLSGF IGPTFAIVMS NMIEVFYYRN PSKMESKTRE YVFIYIGTGL YAVVAYLVQH YFFSIMGENL TTRVRRMMLA VILRNDVGWF
0801: DQEENNSNLV AARLSTDAAD VKSAIAERIS VILQNMTSLL VSFVVGFIIE WRVALLILVT FPLLVLANFA QQLSMKGFAG DTAKAHAKTS MIAGEGVSNI
0901: RTVAAFNAQD KILSLFCSEL RVPQMHSLRR SQISGALFGL SQLSLYASEA LILWFGAHLV RTHVSTFSKV IKVFVVLVIT ANSVAETVSL APEIVRGGES
1001: IRSVFSVLNS RTRIDPDDPD AEQVESVRGE IDFRHVDFAY PTRPDVMVFK DLSLRIRAGQ SQALVGASGS GKSTVIALVE RFYDPLAGKV MIDGKDIRRL
1101: NLKSLRLRIG LVQQEPVLFA TSILENIAYG RDGATEEEVV EAAKVANVHG FVSALPDGYR TPVGERGVQL SGGQKQRIAI ARAVLKDPAV LLLDEATSAL
1201: DAESECVLQE ALERIMKGRT AVLVAHRLST IRGVDSIAVV QDGRVVEQGS HGDLVSRPDG AYSRLLQLQL HHG
Best Arabidopsis Sequence Match ( AT3G28860.1 )
(BLAST)
0001: MSETNTTDAK TVPAEAEKKK EQSLPFFKLF SFADKFDYLL MFVGSLGAIV HGSSMPVFFL LFGQMVNGFG KNQMDLHQMV HEVSRYSLYF VYLGLVVCFS
0101: SYAEIACWMY SGERQVAALR KKYLEAVLKQ DVGFFDTDAR TGDIVFSVST DTLLVQDAIS EKVGNFIHYL STFLAGLVVG FVSAWKLALL SVAVIPGIAF
0201: AGGLYAYTLT GITSKSRESY ANAGVIAEQA IAQVRTVYSY VGESKALNAY SDAIQYTLKL GYKAGMAKGL GLGCTYGIAC MSWALVFWYA GVFIRNGQTD
0301: GGKAFTAIFS AIVGGMSLGQ SFSNLGAFSK GKAAGYKLME IINQRPTIIQ DPLDGKCLDQ VHGNIEFKDV TFSYPSRPDV MIFRNFNIFF PSGKTVAVVG
0401: GSGSGKSTVV SLIERFYDPN SGQILLDGVE IKTLQLKFLR EQIGLVNQEP ALFATTILEN ILYGKPDATM VEVEAAASAA NAHSFITLLP KGYDTQVGER
0501: GVQLSGGQKQ RIAIARAMLK DPKILLLDEA TSALDASSES IVQEALDRVM VGRTTVVVAH RLCTIRNVDS IAVIQQGQVV ETGTHEELIA KSGAYASLIR
0601: FQEMVGTRDF SNPSTRRTRS TRLSHSLSTK SLSLRSGSLR NLSYSYSTGA DGRIEMISNA ETDRKTRAPE NYFYRLLKLN SPEWPYSIMG AVGSILSGFI
0701: GPTFAIVMSN MIEVFYYTDY DSMERKTKEY VFIYIGAGLY AVGAYLIQHY FFSIMGENLT TRVRRMMLSA ILRNEVGWFD EDEHNSSLIA ARLATDAADV
0801: KSAIAERISV ILQNMTSLLT SFIVAFIVEW RVSLLILGTF PLLVLANFAQ QLSLKGFAGD TAKAHAKTSM IAGEGVSNIR TVAAFNAQSK ILSLFCHELR
0901: VPQKRSLYRS QTSGFLFGLS QLALYGSEAL ILWYGAHLVS KGVSTFSKVI KVFVVLVITA NSVAETVSLA PEIIRGGEAV GSVFSVLDRQ TRIDPDDADA
1001: DPVETIRGDI EFRHVDFAYP SRPDVMVFRD FNLRIRAGHS QALVGASGSG KSSVIAMIER FYDPLAGKVM IDGKDIRRLN LKSLRLKIGL VQQEPALFAA
1101: TIFDNIAYGK DGATESEVID AARAANAHGF ISGLPEGYKT PVGERGVQLS GGQKQRIAIA RAVLKNPTVL LLDEATSALD AESECVLQEA LERLMRGRTT
1201: VVVAHRLSTI RGVDCIGVIQ DGRIVEQGSH SELVSRPEGA YSRLLQLQTH RI
Arabidopsis Description
ABCB19ABC transporter B family member 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJX0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.