Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G322600.1 | Wheat | cytosol, peroxisome, plasma membrane | 99.45 | 99.52 |
| TraesCS2A01G344300.1 | Wheat | cytosol, peroxisome, plasma membrane | 99.05 | 99.13 |
| HORVU2Hr1G080200.1 | Barley | plasma membrane | 98.66 | 98.42 |
| Os04t0459000-01 | Rice | plasma membrane | 93.67 | 94.04 |
| EES12287 | Sorghum | cytosol, peroxisome, plasma membrane | 93.28 | 93.42 |
| Zm00001d025590_P002 | Maize | cytosol, nucleus, plasma membrane | 93.2 | 92.54 |
| GSMUA_Achr8P24160_001 | Banana | plasma membrane | 79.59 | 89.26 |
| VIT_14s0108g00430.t01 | Wine grape | cytosol, peroxisome, plasma membrane | 84.26 | 85.2 |
| KRH18485 | Soybean | endoplasmic reticulum, mitochondrion | 83.86 | 84.87 |
| KRG93519 | Soybean | cytosol, peroxisome, plasma membrane | 83.47 | 84.4 |
| PGSC0003DMT400003590 | Potato | plasma membrane | 83.39 | 84.39 |
| Solyc02g087870.2.1 | Tomato | plasma membrane | 83.31 | 84.31 |
| TraesCS2B01G550700.2 | Wheat | plasma membrane | 82.2 | 82.66 |
| AT3G28860.1 | Thale cress | plasma membrane | 81.72 | 82.51 |
| Bra025359.1-P | Field mustard | plasma membrane | 81.41 | 82.19 |
| Bra039042.1-P | Field mustard | plasma membrane | 81.41 | 82.19 |
| CDY20012 | Canola | plasma membrane | 81.33 | 82.04 |
| CDY00109 | Canola | plasma membrane | 80.78 | 82.01 |
| CDX86408 | Canola | plasma membrane | 80.22 | 81.97 |
| CDY65012 | Canola | plasma membrane | 81.25 | 81.96 |
| GSMUA_Achr4P09980_001 | Banana | plasma membrane | 72.31 | 79.9 |
| TraesCS6B01G145800.1 | Wheat | cytosol | 11.39 | 56.92 |
| TraesCS6B01G291900.1 | Wheat | peroxisome | 50.79 | 50.83 |
| TraesCS7B01G181700.1 | Wheat | cytosol | 52.06 | 48.1 |
| TraesCS1B01G099000.1 | Wheat | cytosol, peroxisome, plasma membrane | 43.59 | 43.22 |
| TraesCS3B01G290300.2 | Wheat | peroxisome | 42.96 | 42.86 |
| TraesCS3B01G136800.1 | Wheat | golgi, mitochondrion, peroxisome, plasma membrane, plastid | 42.48 | 42.82 |
| TraesCS2B01G012100.3 | Wheat | plasma membrane | 42.33 | 42.7 |
| TraesCS3B01G401600.3 | Wheat | cytosol, peroxisome, plasma membrane | 42.64 | 42.18 |
| TraesCS2B01G012300.1 | Wheat | plasma membrane | 41.93 | 42.13 |
| TraesCS6B01G145600.1 | Wheat | peroxisome | 41.85 | 41.85 |
| TraesCS2B01G012200.1 | Wheat | golgi | 35.68 | 41.8 |
| TraesCS1B01G387400.1 | Wheat | peroxisome | 41.61 | 41.58 |
| TraesCS3B01G291100.3 | Wheat | peroxisome | 41.14 | 41.14 |
| TraesCS3B01G291000.1 | Wheat | peroxisome | 40.9 | 41.1 |
| TraesCS2B01G358200.1 | Wheat | plasma membrane | 40.11 | 40.08 |
| TraesCS7B01G203400.1 | Wheat | peroxisome | 39.0 | 39.19 |
| TraesCS3B01G290700.1 | Wheat | peroxisome | 32.36 | 39.03 |
| TraesCS6B01G170700.1 | Wheat | plasma membrane | 38.21 | 38.52 |
| TraesCS4B01G298100.1 | Wheat | mitochondrion, plasma membrane | 40.03 | 38.51 |
| TraesCS7B01G203300.1 | Wheat | peroxisome | 37.9 | 37.9 |
| TraesCS4B01G203000.1 | Wheat | cytosol, plasma membrane, plastid | 41.93 | 37.62 |
| TraesCS3B01G607600.1 | Wheat | cytosol, plasma membrane, vacuole | 41.93 | 37.59 |
Protein Annotations
| MapMan:11.2.4.3 | MapMan:24.1.3.1.1 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | InterPro:IPR003439 |
| InterPro:IPR011527 | InterPro:IPR036640 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 |
| PFscan:PS50893 | PFscan:PS50929 | PFscan:PS51257 | PANTHER:PTHR24221 | PANTHER:PTHR24221:SF382 | SMART:SM00382 |
| SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS2B01G341800 | EnsemblPlants:TraesCS2B01G341800.2 | TIGR:cd03249 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:-:487231780..487237830
Molecular Weight (calculated)
137335.0 Da
IEP (calculated)
8.552
GRAVY (calculated)
0.146
Length
1264 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAEETGKAEA SAGAASCGAG GGCEAVKKRA EQSVAFHELF SFADPLDWLL MAAGSAGAVV HGAAMPVFFL LFGELVNGFG KNQHHLRRMT DEVSKYSLYF
0101: VYLGLVVCAS SYLEIACWMY TGERQVGALR RRYLEAVLRQ DVGFFDTDAR TGDVVFSVST DTLLVQDAIG EKVGNFIHYL ATFLAGLVVG FVSAWRLALL
0201: SIAVIPGIAF AGGLYAYTLT GLTSKSRDSY ANAGIIAEQA IAQVRTVYSY VGESKALNSY SEAIQSTLKL GYKAGMAKGL GIGCTYGIAC MSWALVFWYA
0301: GVFIRSGQTD GGKAFTAIFS AIVGGLSLGQ SFSNLGAFSK GKIAGYKLLE VIRQRPTIVQ DSTDGRCLDE VHGNIEFKEV SFSYPSRPDV TVFRDFSLFF
0401: PAGKTAAVVG GSGSGKSTVV SLIERFYDPN QGQVLLDNAD IKSLQLKWLR DQIGLVNQEP ALFATTIIDN ILYGKPDATM AEVEAAASAA NAHSFIALLP
0501: NGYNTQVGER GLQLSGGQKQ RIAIARAMLK NPKILLLDEA TSALDAGSES IVQEALDRIM IGRTTVVVAH RLSTIRSVDM IAVIQQGQVV ETGTHDELLA
0601: KGSSGAYAAL IRFQEMARNR DFRGASTRKN RSSRLSNSLS TRSLSLRSGS LRNLSYSYST GADGRIEMVS NADNDRKYPA PKGYFFKLLK LNAPEWPYTV
0701: LGAIGSIMSG FIGPTFAIVM SNMIEVFYFR DPNAMERKTR EYVFIYIGTG FYAVVAYLIQ HYFFSIMGEN LTTRVRRMML AVILRNDVGW FDEEENNSSL
0801: VAARLNTEAA DVKSAIAERI SVILQNMTSL LVSFIVGFII EWRVAILILV TFPLLVLANF AQQLSMKGFA GDTAKAHAKT SMIAGEGVSN IRTVAAFNAQ
0901: DKILSLFCSE LRVPQMHSLR RSQISGVLYG LSQLSLYASE ALILWYGAHL VRHHVSTFSR VIKVFVVLVI TANSVAETVS LAPEIIRGGE SVRSVFAVLN
1001: SRTRIDPDEP EAEQVEKVRG EIELRHVDFA YPSRPDVMVF KEFSLRIRAG QSQALVGASG SGKSTVIALI ERFYDPMAGK VMIDGKDIRR LNLKSLRLKI
1101: GLVQQEPVLF ATSILENIAY GKDGVTEEEV VEAAKVANVH GFVGALPDGY RTPVGERGVQ LSGGQKQRIA IARAVLKDPA ILLLDEATSA LDAESECVLQ
1201: EALGRIMKGR TTVLVAHRLS TIRCVDSIAV VQDGRVVEQG SHGDLVSRPD GAYSRLLQLQ LHHG
0101: VYLGLVVCAS SYLEIACWMY TGERQVGALR RRYLEAVLRQ DVGFFDTDAR TGDVVFSVST DTLLVQDAIG EKVGNFIHYL ATFLAGLVVG FVSAWRLALL
0201: SIAVIPGIAF AGGLYAYTLT GLTSKSRDSY ANAGIIAEQA IAQVRTVYSY VGESKALNSY SEAIQSTLKL GYKAGMAKGL GIGCTYGIAC MSWALVFWYA
0301: GVFIRSGQTD GGKAFTAIFS AIVGGLSLGQ SFSNLGAFSK GKIAGYKLLE VIRQRPTIVQ DSTDGRCLDE VHGNIEFKEV SFSYPSRPDV TVFRDFSLFF
0401: PAGKTAAVVG GSGSGKSTVV SLIERFYDPN QGQVLLDNAD IKSLQLKWLR DQIGLVNQEP ALFATTIIDN ILYGKPDATM AEVEAAASAA NAHSFIALLP
0501: NGYNTQVGER GLQLSGGQKQ RIAIARAMLK NPKILLLDEA TSALDAGSES IVQEALDRIM IGRTTVVVAH RLSTIRSVDM IAVIQQGQVV ETGTHDELLA
0601: KGSSGAYAAL IRFQEMARNR DFRGASTRKN RSSRLSNSLS TRSLSLRSGS LRNLSYSYST GADGRIEMVS NADNDRKYPA PKGYFFKLLK LNAPEWPYTV
0701: LGAIGSIMSG FIGPTFAIVM SNMIEVFYFR DPNAMERKTR EYVFIYIGTG FYAVVAYLIQ HYFFSIMGEN LTTRVRRMML AVILRNDVGW FDEEENNSSL
0801: VAARLNTEAA DVKSAIAERI SVILQNMTSL LVSFIVGFII EWRVAILILV TFPLLVLANF AQQLSMKGFA GDTAKAHAKT SMIAGEGVSN IRTVAAFNAQ
0901: DKILSLFCSE LRVPQMHSLR RSQISGVLYG LSQLSLYASE ALILWYGAHL VRHHVSTFSR VIKVFVVLVI TANSVAETVS LAPEIIRGGE SVRSVFAVLN
1001: SRTRIDPDEP EAEQVEKVRG EIELRHVDFA YPSRPDVMVF KEFSLRIRAG QSQALVGASG SGKSTVIALI ERFYDPMAGK VMIDGKDIRR LNLKSLRLKI
1101: GLVQQEPVLF ATSILENIAY GKDGVTEEEV VEAAKVANVH GFVGALPDGY RTPVGERGVQ LSGGQKQRIA IARAVLKDPA ILLLDEATSA LDAESECVLQ
1201: EALGRIMKGR TTVLVAHRLS TIRCVDSIAV VQDGRVVEQG SHGDLVSRPD GAYSRLLQLQ LHHG
0001: MSETNTTDAK TVPAEAEKKK EQSLPFFKLF SFADKFDYLL MFVGSLGAIV HGSSMPVFFL LFGQMVNGFG KNQMDLHQMV HEVSRYSLYF VYLGLVVCFS
0101: SYAEIACWMY SGERQVAALR KKYLEAVLKQ DVGFFDTDAR TGDIVFSVST DTLLVQDAIS EKVGNFIHYL STFLAGLVVG FVSAWKLALL SVAVIPGIAF
0201: AGGLYAYTLT GITSKSRESY ANAGVIAEQA IAQVRTVYSY VGESKALNAY SDAIQYTLKL GYKAGMAKGL GLGCTYGIAC MSWALVFWYA GVFIRNGQTD
0301: GGKAFTAIFS AIVGGMSLGQ SFSNLGAFSK GKAAGYKLME IINQRPTIIQ DPLDGKCLDQ VHGNIEFKDV TFSYPSRPDV MIFRNFNIFF PSGKTVAVVG
0401: GSGSGKSTVV SLIERFYDPN SGQILLDGVE IKTLQLKFLR EQIGLVNQEP ALFATTILEN ILYGKPDATM VEVEAAASAA NAHSFITLLP KGYDTQVGER
0501: GVQLSGGQKQ RIAIARAMLK DPKILLLDEA TSALDASSES IVQEALDRVM VGRTTVVVAH RLCTIRNVDS IAVIQQGQVV ETGTHEELIA KSGAYASLIR
0601: FQEMVGTRDF SNPSTRRTRS TRLSHSLSTK SLSLRSGSLR NLSYSYSTGA DGRIEMISNA ETDRKTRAPE NYFYRLLKLN SPEWPYSIMG AVGSILSGFI
0701: GPTFAIVMSN MIEVFYYTDY DSMERKTKEY VFIYIGAGLY AVGAYLIQHY FFSIMGENLT TRVRRMMLSA ILRNEVGWFD EDEHNSSLIA ARLATDAADV
0801: KSAIAERISV ILQNMTSLLT SFIVAFIVEW RVSLLILGTF PLLVLANFAQ QLSLKGFAGD TAKAHAKTSM IAGEGVSNIR TVAAFNAQSK ILSLFCHELR
0901: VPQKRSLYRS QTSGFLFGLS QLALYGSEAL ILWYGAHLVS KGVSTFSKVI KVFVVLVITA NSVAETVSLA PEIIRGGEAV GSVFSVLDRQ TRIDPDDADA
1001: DPVETIRGDI EFRHVDFAYP SRPDVMVFRD FNLRIRAGHS QALVGASGSG KSSVIAMIER FYDPLAGKVM IDGKDIRRLN LKSLRLKIGL VQQEPALFAA
1101: TIFDNIAYGK DGATESEVID AARAANAHGF ISGLPEGYKT PVGERGVQLS GGQKQRIAIA RAVLKNPTVL LLDEATSALD AESECVLQEA LERLMRGRTT
1201: VVVAHRLSTI RGVDCIGVIQ DGRIVEQGSH SELVSRPEGA YSRLLQLQTH RI
0101: SYAEIACWMY SGERQVAALR KKYLEAVLKQ DVGFFDTDAR TGDIVFSVST DTLLVQDAIS EKVGNFIHYL STFLAGLVVG FVSAWKLALL SVAVIPGIAF
0201: AGGLYAYTLT GITSKSRESY ANAGVIAEQA IAQVRTVYSY VGESKALNAY SDAIQYTLKL GYKAGMAKGL GLGCTYGIAC MSWALVFWYA GVFIRNGQTD
0301: GGKAFTAIFS AIVGGMSLGQ SFSNLGAFSK GKAAGYKLME IINQRPTIIQ DPLDGKCLDQ VHGNIEFKDV TFSYPSRPDV MIFRNFNIFF PSGKTVAVVG
0401: GSGSGKSTVV SLIERFYDPN SGQILLDGVE IKTLQLKFLR EQIGLVNQEP ALFATTILEN ILYGKPDATM VEVEAAASAA NAHSFITLLP KGYDTQVGER
0501: GVQLSGGQKQ RIAIARAMLK DPKILLLDEA TSALDASSES IVQEALDRVM VGRTTVVVAH RLCTIRNVDS IAVIQQGQVV ETGTHEELIA KSGAYASLIR
0601: FQEMVGTRDF SNPSTRRTRS TRLSHSLSTK SLSLRSGSLR NLSYSYSTGA DGRIEMISNA ETDRKTRAPE NYFYRLLKLN SPEWPYSIMG AVGSILSGFI
0701: GPTFAIVMSN MIEVFYYTDY DSMERKTKEY VFIYIGAGLY AVGAYLIQHY FFSIMGENLT TRVRRMMLSA ILRNEVGWFD EDEHNSSLIA ARLATDAADV
0801: KSAIAERISV ILQNMTSLLT SFIVAFIVEW RVSLLILGTF PLLVLANFAQ QLSLKGFAGD TAKAHAKTSM IAGEGVSNIR TVAAFNAQSK ILSLFCHELR
0901: VPQKRSLYRS QTSGFLFGLS QLALYGSEAL ILWYGAHLVS KGVSTFSKVI KVFVVLVITA NSVAETVSLA PEIIRGGEAV GSVFSVLDRQ TRIDPDDADA
1001: DPVETIRGDI EFRHVDFAYP SRPDVMVFRD FNLRIRAGHS QALVGASGSG KSSVIAMIER FYDPLAGKVM IDGKDIRRLN LKSLRLKIGL VQQEPALFAA
1101: TIFDNIAYGK DGATESEVID AARAANAHGF ISGLPEGYKT PVGERGVQLS GGQKQRIAIA RAVLKNPTVL LLDEATSALD AESECVLQEA LERLMRGRTT
1201: VVVAHRLSTI RGVDCIGVIQ DGRIVEQGSH SELVSRPEGA YSRLLQLQTH RI
Arabidopsis Description
ABCB19ABC transporter B family member 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9LJX0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.