Factsheet for TraesCS5A01G134500.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS1A01G404300.1
TraesCS2A01G033700.1
TraesCS2A01G344300.1
TraesCS2A01G521400.2
TraesCS2B01G047400.1
TraesCS2B01G341800.2
TraesCS2B01G550700.2
TraesCS2D01G033200.2
TraesCS2D01G322600.1
TraesCS2D01G523100.2
TraesCS7A01G284900.1
TraesCS7B01G181700.1
TraesCS7D01G284100.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G21640.1	TraesCS1A01G404300.1	AT2G34660.1	15133126
AT3G21640.1	TraesCS7A01G284900.1	AT2G36910.1	14517332
AT3G21640.1	TraesCS7B01G181700.1	AT2G36910.1	14517332
AT3G21640.1	TraesCS7D01G284100.1	AT2G36910.1	14517332
AT3G21640.1	TraesCS2A01G344300.1	AT3G28860.1	14517332
AT3G21640.1	TraesCS2A01G521400.2	AT3G28860.1	14517332
AT3G21640.1	TraesCS2B01G341800.2	AT3G28860.1	14517332
AT3G21640.1	TraesCS2B01G550700.2	AT3G28860.1	14517332
AT3G21640.1	TraesCS2D01G322600.1	AT3G28860.1	14517332
AT3G21640.1	TraesCS2D01G523100.2	AT3G28860.1	14517332
AT3G21640.1	TraesCS2A01G033700.1	AT5G52640.1	12410806
AT3G21640.1	TraesCS2B01G047400.1	AT5G52640.1	12410806
AT3G21640.1	TraesCS2D01G033200.2	AT5G52640.1	12410806

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G131200.1	Wheat	cytosol	99.46	99.19
TraesCS5D01G139000.1	Wheat	cytosol	99.19	98.92
HORVU5Hr1G041060.1	Barley	cytosol, plastid	96.21	83.53
Os11t0148300-01	Rice	cytosol	84.28	82.93
EES07974	Sorghum	cytosol	82.11	82.34
Zm00001d004930_P001	Maize	mitochondrion	82.38	81.28
CDY34049	Canola	cytosol	21.41	78.22
VIT_13s0064g00580.t01	Wine grape	cytosol	71.27	72.05
GSMUA_Achr6P12690_001	Banana	cytosol	69.38	68.45
PGSC0003DMT400017681	Potato	cytosol	67.75	67.93
KRH23877	Soybean	cytosol, endoplasmic reticulum, nucleus	67.75	67.57
Solyc01g087470.2.1	Tomato	cytosol	58.54	66.46
KRH39924	Soybean	endoplasmic reticulum	66.12	65.95
CDY29061	Canola	cytosol	63.69	65.83
CDX78057	Canola	cytosol	63.14	65.82
Bra006895.1-P	Field mustard	cytosol	65.04	65.75
Bra012823.1-P	Field mustard	cytosol	62.87	64.99
AT3G21640.1	Thale cress	cytosol	63.69	64.38
CDX73664	Canola	cytosol	64.23	63.54
CDY64639	Canola	endoplasmic reticulum, extracellular	44.44	61.19
CDX90622	Canola	cytosol	65.04	60.76
TraesCS7A01G257100.1	Wheat	cytosol	26.02	17.17
TraesCS2A01G277100.1	Wheat	cytosol	26.56	16.84
TraesCS6A01G314100.1	Wheat	plastid	8.67	16.58
TraesCS1A01G184600.1	Wheat	cytosol	23.31	13.78
TraesCS2A01G050600.3	Wheat	cytosol	23.85	13.58

Protein Annotations

Gene3D:1.25.40.10	MapMan:18.12.2	Gene3D:3.10.50.40	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005516	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0007275	GO:GO:0008150
GO:GO:0016020	GO:GO:0048366	InterPro:IPR001179	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734
PFAM:PF00254	PFAM:PF13181	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50005	PFscan:PS50059
PFscan:PS50293	PANTHER:PTHR43811	PANTHER:PTHR43811:SF21	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF54534
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	EnsemblPlantsGene:TraesCS5A01G134500	EnsemblPlants:TraesCS5A01G134500.3	SEG:seg

Description

No Description!

Coordinates

chr5A:-:303282250..303287127

Molecular Weight (calculated)

42001.2 Da

IEP (calculated)

6.614

GRAVY (calculated)

-0.608

Length

369 amino acids

Sequence
(BLAST)

001: MPEDAAPIAP APASDPTAGS SDDEITVEDA SFARTELPQD GSPPVVTTDM EVLHDKVKKQ VIKEGHGKIP SKFSTCFVHY RAWVQSSMHK FEDTWQEQHP
101: VEIVIGKEKK QMSGLGIGVG HMKSGERALL HVSWELGYGK EGSFSFPNVP PSADLIYEVE LIGFDDAKEG KARSDMTVEE RIEAADRRKL EGNDYFKEKK
201: FEEAMQQYEM AVAYMGDDFM FQLFGKYRDM ALAVKNPCHL NMAACLIKQK RFDEAIAQCS IVLSEDETNV KALFRRGKAR AELGQTESAR EDFLKAKKHS
301: PEDKEIMREL RSLAEQDKAM YQKQRELYKG LFGPRPQPKP KAKNFAVLFW QWLVSLVRYL ARMFTRKND

Best Arabidopsis Sequence Match ( AT3G21640.1 )
(BLAST)

001: MDESLEHQTQ THDQESEIVT EGSAVVHSEP SQEGNVPPKV DSEAEVLDEK VSKQIIKEGH GSKPSKYSTC FLHYRAWTKN SQHKFEDTWH EQQPIELVLG
101: KEKKELAGLA IGVASMKSGE RALVHVGWEL AYGKEGNFSF PNVPPMADLL YEVEVIGFDE TKEGKARSDM TVEERIGAAD RRKMDGNSLF KEEKLEEAMQ
201: QYEMAIAYMG DDFMFQLYGK YQDMALAVKN PCHLNIAACL IKLKRYDEAI GHCNIVLTEE EKNPKALFRR GKAKAELGQM DSARDDFRKA QKYAPDDKAI
301: RRELRALAEQ EKALYQKQKE MYKGIFKGKD EGGAKSKSLF WLIVLWQWFV SLFSRIFRRH RVKAD

Arabidopsis Description

FKBP42Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178V6X3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.