Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- vacuole 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G21640.1 | EES12878 | AT2G34660.1 | 15133126 |
| AT3G21640.1 | OQU80682 | AT2G36910.1 | 14517332 |
| AT3G21640.1 | EES12287 | AT3G28860.1 | 14517332 |
| AT3G21640.1 | EES12952 | AT3G28860.1 | 14517332 |
| AT3G21640.1 | EES11741 | AT5G52640.1 | 12410806 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d004930_P001 | Maize | mitochondrion | 94.57 | 93.05 |
| Os12t0145500-01 | Rice | cytosol | 86.96 | 86.49 |
| Os11t0148300-01 | Rice | cytosol | 85.87 | 84.27 |
| CDY34049 | Canola | cytosol | 22.83 | 83.17 |
| TraesCS5A01G134500.3 | Wheat | cytosol | 82.34 | 82.11 |
| TraesCS5B01G131200.1 | Wheat | cytosol | 82.34 | 81.89 |
| TraesCS5D01G139000.1 | Wheat | cytosol | 81.79 | 81.35 |
| VIT_13s0064g00580.t01 | Wine grape | cytosol | 73.64 | 74.25 |
| HORVU5Hr1G041060.1 | Barley | cytosol, plastid | 82.61 | 71.53 |
| PGSC0003DMT400017681 | Potato | cytosol | 71.47 | 71.47 |
| KRH23877 | Soybean | cytosol, endoplasmic reticulum, nucleus | 71.47 | 71.08 |
| GSMUA_Achr6P12690_001 | Banana | cytosol | 71.47 | 70.32 |
| Bra006895.1-P | Field mustard | cytosol | 69.02 | 69.59 |
| Solyc01g087470.2.1 | Tomato | cytosol | 61.41 | 69.54 |
| AT3G21640.1 | Thale cress | cytosol | 68.75 | 69.32 |
| KRH39924 | Soybean | endoplasmic reticulum | 69.57 | 69.19 |
| CDX78057 | Canola | cytosol | 66.3 | 68.93 |
| CDY29061 | Canola | cytosol | 66.85 | 68.91 |
| Bra012823.1-P | Field mustard | cytosol | 66.3 | 68.35 |
| CDX73664 | Canola | cytosol | 68.48 | 67.56 |
| CDX90622 | Canola | cytosol | 68.48 | 63.8 |
| CDY64639 | Canola | endoplasmic reticulum, extracellular | 45.65 | 62.69 |
| OQU80175 | Sorghum | mitochondrion | 20.11 | 45.96 |
| EES07562 | Sorghum | cytosol, mitochondrion, plastid | 7.07 | 23.21 |
| EES19645 | Sorghum | nucleus | 9.78 | 19.35 |
| KXG25560 | Sorghum | cytosol | 28.26 | 18.81 |
| EER88340 | Sorghum | cytosol | 26.63 | 16.55 |
| OQU84952 | Sorghum | cytosol | 27.45 | 14.15 |
| EER94808 | Sorghum | cytosol | 22.83 | 13.33 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:18.12.2 | Gene3D:3.10.50.40 | EntrezGene:8069313 | UniProt:C5Y4L0 | EnsemblPlants:EES07974 |
| ProteinID:EES07974 | ProteinID:EES07974.1 | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005516 | GO:GO:0005575 | GO:GO:0005623 | GO:GO:0005886 |
| GO:GO:0006464 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016853 | GO:GO:0019538 | GO:GO:0048366 | InterPro:IPR001179 | InterPro:IPR011990 |
| InterPro:IPR013026 | InterPro:IPR019734 | PFAM:PF00254 | PFAM:PF13181 | InterPro:PPIase_FKBP | InterPro:PPIase_FKBP_dom |
| PFscan:PS50005 | PFscan:PS50059 | PFscan:PS50293 | PANTHER:PTHR43811 | PANTHER:PTHR43811:SF21 | SMART:SM00028 |
| EnsemblPlantsGene:SORBI_3005G034300 | SUPFAM:SSF48452 | SUPFAM:SSF54534 | unigene:Sbi.5299 | TMHMM:TMhelix | InterPro:TPR-contain_dom |
| InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat | UniParc:UPI0001A8621A | RefSeq:XP_002448986.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr5:+:3088294..3091879
Molecular Weight (calculated)
41841.2 Da
IEP (calculated)
6.729
GRAVY (calculated)
-0.495
Length
368 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVVEEDAAP SADPAAGSSD NEITVEEASF VHSEPPQDGS APPVVSSDME VLHDKVKKQV IKEGHGRKPL KFATCFVHYR AWAQGSSHKF EDTWQEQHPI
101: ELVLGKEKKQ MSGLGIGVSS MKSGERALLH VGWELGYGKE GSFSFPNVPP MADLVYEVEL IGFDDVKEGK ARSDMTVEER IAAADRRKIE GNGYFKEQKL
201: EEAMQQYEMA IAYMGDDFMF QLFGKYRDMA LAVKNPCHLN IAACLIKLKR FDEAIAQCSI VLSEDESNVK ALFRRGKAKS ELGQTESARE DFLKAKKYSP
301: EDKEILRELR LLAEQDKALY QKQKELYKGL FGPRPEVKPK KANYLVVFWQ WLVSFFLYLF RMFKRKKE
101: ELVLGKEKKQ MSGLGIGVSS MKSGERALLH VGWELGYGKE GSFSFPNVPP MADLVYEVEL IGFDDVKEGK ARSDMTVEER IAAADRRKIE GNGYFKEQKL
201: EEAMQQYEMA IAYMGDDFMF QLFGKYRDMA LAVKNPCHLN IAACLIKLKR FDEAIAQCSI VLSEDESNVK ALFRRGKAKS ELGQTESARE DFLKAKKYSP
301: EDKEILRELR LLAEQDKALY QKQKELYKGL FGPRPEVKPK KANYLVVFWQ WLVSFFLYLF RMFKRKKE
001: MDESLEHQTQ THDQESEIVT EGSAVVHSEP SQEGNVPPKV DSEAEVLDEK VSKQIIKEGH GSKPSKYSTC FLHYRAWTKN SQHKFEDTWH EQQPIELVLG
101: KEKKELAGLA IGVASMKSGE RALVHVGWEL AYGKEGNFSF PNVPPMADLL YEVEVIGFDE TKEGKARSDM TVEERIGAAD RRKMDGNSLF KEEKLEEAMQ
201: QYEMAIAYMG DDFMFQLYGK YQDMALAVKN PCHLNIAACL IKLKRYDEAI GHCNIVLTEE EKNPKALFRR GKAKAELGQM DSARDDFRKA QKYAPDDKAI
301: RRELRALAEQ EKALYQKQKE MYKGIFKGKD EGGAKSKSLF WLIVLWQWFV SLFSRIFRRH RVKAD
101: KEKKELAGLA IGVASMKSGE RALVHVGWEL AYGKEGNFSF PNVPPMADLL YEVEVIGFDE TKEGKARSDM TVEERIGAAD RRKMDGNSLF KEEKLEEAMQ
201: QYEMAIAYMG DDFMFQLYGK YQDMALAVKN PCHLNIAACL IKLKRYDEAI GHCNIVLTEE EKNPKALFRR GKAKAELGQM DSARDDFRKA QKYAPDDKAI
301: RRELRALAEQ EKALYQKQKE MYKGIFKGKD EGGAKSKSLF WLIVLWQWFV SLFSRIFRRH RVKAD
Arabidopsis Description
FKBP42Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178V6X3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.