CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
nucleus 1
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	cytosol
MultiLoc:	nucleus
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d047426_P003	Maize	cytosol	94.29	90.55
TraesCS1A01G184600.1	Wheat	cytosol	85.56	86.38
TraesCS1D01G192100.3	Wheat	cytosol	85.4	86.22
TraesCS1B01G192700.1	Wheat	cytosol, mitochondrion	83.02	86.16
Os03t0367000-01	Rice	plasma membrane	85.4	85.13
HORVU4Hr1G042800.9	Barley	cytosol	76.67	72.74
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, nucleus	67.94	68.59
VIT_08s0007g01460.t01	Wine grape	nucleus	67.3	68.39
KRH62430	Soybean	cytosol	66.83	67.68
KRH75755	Soybean	cytosol, endoplasmic reticulum	66.51	67.36
Solyc11g011420.1.1	Tomato	cytosol, plastid	61.43	66.27
AT3G54010.1	Thale cress	cytosol	64.44	63.94
CDX76177	Canola	cytosol	63.65	63.35
Bra014849.1-P	Field mustard	cytosol	63.81	62.62
CDY13167	Canola	cytosol	63.17	61.99
CDY07563	Canola	cytosol	62.86	61.68
Bra003166.1-P	Field mustard	cytosol	62.7	61.15
CDX67584	Canola	cytosol	62.38	60.55
EES07562	Sorghum	cytosol, mitochondrion, plastid	5.56	31.25
KXG25560	Sorghum	cytosol	26.67	30.38
EER88340	Sorghum	cytosol	26.51	28.21
OQU84952	Sorghum	cytosol	26.35	23.25
EES07974	Sorghum	cytosol	13.33	22.83
EES19645	Sorghum	nucleus	6.35	21.51
OQU80175	Sorghum	mitochondrion	2.22	8.7

Protein Annotations

Gene3D:1.25.40.10	MapMan:18.12.2	Gene3D:3.10.50.40	EntrezGene:8080781	UniProt:C5WYR0	ncoils:Coil
EnsemblPlants:EER94808	ProteinID:EER94808	ProteinID:EER94808.1	GO:GO:0000003	GO:GO:0000413	GO:GO:0003674
GO:GO:0003755	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005528	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005829	GO:GO:0006464
GO:GO:0006629	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009653
GO:GO:0009719	GO:GO:0009735	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009826
GO:GO:0009880	GO:GO:0009987	GO:GO:0016043	GO:GO:0016049	GO:GO:0016853	GO:GO:0019538
GO:GO:0030010	GO:GO:0030154	GO:GO:0040007	GO:GO:0042761	GO:GO:0048364	GO:GO:0048527
GO:GO:0061077	GO:GO:0099402	InterPro:IPR001179	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734
InterPro:PAS1	PFAM:PF00254	PFAM:PF13174	PFAM:PF13181	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom
PFscan:PS50005	PFscan:PS50059	PFscan:PS50293	PANTHER:PTHR10516	PANTHER:PTHR10516:SF268	SMART:SM00028
EnsemblPlantsGene:SORBI_3001G360900	SUPFAM:SSF48452	SUPFAM:SSF54534	unigene:Sbi.15659	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
InterPro:TPR_repeat	UniParc:UPI0001A83375	RefSeq:XP_002467810.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr1:-:65073256..65089639

Molecular Weight (calculated)

70366.3 Da

IEP (calculated)

5.435

GRAVY (calculated)

-0.521

Length

630 amino acids

Sequence
(BLAST)

001: MAHDGGDNGG ELPPPAKKKS PAEEEAEKRR KKLTPGSLMK GIIRSGSGDA TPAEGDQVIL HCTTRTMDGV IINSTRREHG GKGIPLRFVL GKSKMILGFA
101: EGFPTMLKGE IAMFKMQPKI HYAEDDCPVA APDGFPKDDE LQFEIEMLDF FKAKVVAEDL GVVKKIVEEG KGWETPREPY EITARITART ADGKEIIPSK
201: EEAYFFTIGK SEVPKGLEMG IGTMARKEKA IIFVSGTYLT KSSLMPQLEG LEEVHFYIEL VQFIQVRDML GDGRLIKRRV VDGKGEFPMD CPLHDSLLKV
301: HYKGMLLDEP KSVFYDTHVD NDGEPLEFCS GEGLVPEGFE MCVRLMLPGE KSIVTCPPDF AYDKFPRPAN VPEGAHVQWE IELLGFEMPK DWTGLTFEEI
401: MDEADKIKNT GNRLFKEGKF ELAKAKYDKV LREYNHVHPH DDDEGKIFAN SRSSLHLNVA FCYQKMGEYR KSIETCNKVL DANPVHVKAL YRRGTSFMLL
501: GEFDDARNDF EKIITVDKSS EPDATAALLK LKQKEQEAEK KARKQFKGLF DKKPGEISEV GVESEGGKDA GGARGSDEAT SADRGANTMD SPTREPEYAF
601: EEERPGLLGR LWPSARRIFS SLGLNRCTIL

Best Arabidopsis Sequence Match ( AT3G54010.1 )
(BLAST)

001: MAVGDQTEQN YLPKKKKSET EDDKRRKKIV PGSLLKAVVR PGGGDSSPVD GDQVIYHCTV RTLDGVVVES TRSESGGRGV PIRDVLGNSK MILGLLEGIP
101: TMHKGEIAMF KMKPEMHYAE IDCPVSAPEN FPKDDELHFE IELLDFSKAK IASDDLGVIK KILNEGEGWE SPREPYEVKA RISAKSGDGH VIFSHTEEPY
201: FFTFGKSEVP KGLEIGIGTM ARKEKAVIYV RKQYLTESPL LHIDQDLEEV HFEVELVHFI QVRDMLGDGR LIKRRIRDGR GEFPMDCPLQ DSRLSVHYKG
301: MLLNEEKTVF YDSKIDNNDQ PLEFSSGEGL VPEGFEMCTR LMLPGEIALV TCPPDYAYDK FPRPPGVSEG AHVQWEIELL GFETPRDWTG LNFQSIMDEA
401: DKIRSTGNRL FKEGKFELAK AKYEKVLREF NHVNPQDEDE GKIFGDTRNM LHLNVAACLL KMGEWRKSIE TCNKVLEAKP GHVKGLYRRG MAYIAGGEYD
501: DARNDFNMMI KVDKSSEADA TAALLKLKQK EQEAESKARK QFKGLFDKRP GEITEVGSEI REESKTIEEV DETKDNDDDE TLEEEGATTV STERKRKWSE
601: KAWPFLKNVM LQIGIQLGVV LIGILIFQFV SAKFT

Arabidopsis Description

PAS1Peptidyl-prolyl cis-trans isomerase PASTICCINO1 [Source:UniProtKB/Swiss-Prot;Acc:Q7DMA9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.