Factsheet for Zm00001d047426_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER94808	Sorghum	cytosol	90.55	94.29
TraesCS1A01G184600.1	Wheat	cytosol	81.71	85.9
TraesCS1B01G192700.1	Wheat	cytosol, mitochondrion	79.27	85.67
TraesCS1D01G192100.3	Wheat	cytosol	81.25	85.42
Os03t0367000-01	Rice	plasma membrane	80.79	83.86
HORVU4Hr1G042800.9	Barley	cytosol	73.63	72.74
VIT_08s0007g01460.t01	Wine grape	nucleus	64.94	68.71
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, nucleus	64.79	68.11
KRH62430	Soybean	cytosol	64.33	67.85
KRH75755	Soybean	cytosol, endoplasmic reticulum	64.02	67.52
Solyc11g011420.1.1	Tomato	cytosol, plastid	59.45	66.78
CDX76177	Canola	cytosol	61.43	63.67
AT3G54010.1	Thale cress	cytosol	61.43	63.46
Bra014849.1-P	Field mustard	cytosol	61.59	62.93
CDY13167	Canola	cytosol	60.82	62.15
CDY07563	Canola	cytosol	60.67	61.99
Bra003166.1-P	Field mustard	cytosol	60.21	61.15
CDX67584	Canola	cytosol	59.91	60.55
Zm00001d029272_P002	Maize	cytosol	54.27	55.28
Zm00001d018134_P001	Maize	mitochondrion	5.79	33.93
Zm00001d031569_P001	Maize	plasma membrane	25.61	28.97
Zm00001d004243_P001	Maize	cytosol	25.46	28.4
Zm00001d004930_P001	Maize	mitochondrion	13.41	23.53
Zm00001d016512_P002	Maize	cytosol	26.37	21.68
Zm00001d038368_P002	Maize	extracellular	6.4	16.73

Protein Annotations

Gene3D:1.25.40.10	MapMan:18.12.2	Gene3D:3.10.50.40	UniProt:A0A1D6P9C5	ProteinID:AQL06400.1	ncoils:Coil
GO:GO:0000003	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783
GO:GO:0005829	GO:GO:0006464	GO:GO:0006629	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009653	GO:GO:0009719	GO:GO:0009735	GO:GO:0009790	GO:GO:0009791
GO:GO:0009793	GO:GO:0009826	GO:GO:0009880	GO:GO:0009987	GO:GO:0016043	GO:GO:0016049
GO:GO:0016853	GO:GO:0019538	GO:GO:0030010	GO:GO:0030154	GO:GO:0040007	GO:GO:0042761
GO:GO:0048364	GO:GO:0048527	GO:GO:0099402	InterPro:IPR001179	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR019734	InterPro:PAS1	PFAM:PF00254	PFAM:PF13181	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom
PFscan:PS50005	PFscan:PS50059	PFscan:PS50293	PANTHER:PTHR10516	PANTHER:PTHR10516:SF268	SMART:SM00028
SUPFAM:SSF48452	SUPFAM:SSF54534	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0008441B44
EnsemblPlantsGene:Zm00001d047426	EnsemblPlants:Zm00001d047426_P003	EnsemblPlants:Zm00001d047426_T003	SEG:seg	:	:

Description

Peptidyl-prolyl cis-trans isomerase PASTICCINO1

Coordinates

chr9:-:129702874..129718975

Molecular Weight (calculated)

73252.7 Da

IEP (calculated)

5.282

GRAVY (calculated)

-0.477

Length

656 amino acids

Sequence
(BLAST)

001: MAQDAGDGGG ELPPPVKKKS PAEEEAEKRR KKLTPGSLMK GIIRSGSGDA TPAEGDQVER TACPLCLHIS CNEIVEVHTI RNVILHCTTR TIDGIVVNST
101: RREHGGKGIP LRFVLGKSKM ILGFAEGFPT MLKGEIAMFK MQPKIHYAED DCPVATPDGF PKDDELQFEI EMLDFFKAKV VADDLGVVKK IVEEGKGWET
201: PREPYEITAR ITARTADGKE IIPSKEEAYF FTIGKSEVPK GLEMGIGTMS HKEKAIIFVS STYLTKSSLM PQLEGLEEVH FYIELVQFIQ VRDMLGDGRL
301: IKRRVFDGKG EFPMDCPLHD SLLRVHYKGM LLDEPKSVFY DTRADNDGEP LEFCSGEGLV PEGFEMCVRL MLPGEKSIVT CPPDFAYDKF PRPANVPEGA
401: HVQWEIELLG FEMPKDWTGL TFEEIMDEAD KIKNTGNRLF KEGKFELAKA KYDKVLREYN HVHPHDDEEG KIFANSRSSL HLNVAFCYQK MGEYRKSIET
501: CNKVLDANPV HVKALYRRGT SFMLLGDFND ARNDFEKMIT IDKSSEQDAT AALLKLKQKE QEAEKKARKQ FKGLFDKKPG EISEVGVESD GGKDAGDARV
601: NGGEATSADR GVNTNDSPTS ESEYAFEEER PGLLGSLWPS ARMIFSSLGM NRCAIL

Best Arabidopsis Sequence Match ( AT3G54010.1 )
(BLAST)

001: MAVGDQTEQN YLPKKKKSET EDDKRRKKIV PGSLLKAVVR PGGGDSSPVD GDQVIYHCTV RTLDGVVVES TRSESGGRGV PIRDVLGNSK MILGLLEGIP
101: TMHKGEIAMF KMKPEMHYAE IDCPVSAPEN FPKDDELHFE IELLDFSKAK IASDDLGVIK KILNEGEGWE SPREPYEVKA RISAKSGDGH VIFSHTEEPY
201: FFTFGKSEVP KGLEIGIGTM ARKEKAVIYV RKQYLTESPL LHIDQDLEEV HFEVELVHFI QVRDMLGDGR LIKRRIRDGR GEFPMDCPLQ DSRLSVHYKG
301: MLLNEEKTVF YDSKIDNNDQ PLEFSSGEGL VPEGFEMCTR LMLPGEIALV TCPPDYAYDK FPRPPGVSEG AHVQWEIELL GFETPRDWTG LNFQSIMDEA
401: DKIRSTGNRL FKEGKFELAK AKYEKVLREF NHVNPQDEDE GKIFGDTRNM LHLNVAACLL KMGEWRKSIE TCNKVLEAKP GHVKGLYRRG MAYIAGGEYD
501: DARNDFNMMI KVDKSSEADA TAALLKLKQK EQEAESKARK QFKGLFDKRP GEITEVGSEI REESKTIEEV DETKDNDDDE TLEEEGATTV STERKRKWSE
601: KAWPFLKNVM LQIGIQLGVV LIGILIFQFV SAKFT

Arabidopsis Description

PAS1Peptidyl-prolyl cis-trans isomerase PASTICCINO1 [Source:UniProtKB/Swiss-Prot;Acc:Q7DMA9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.