Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
mitochondrion:
27297264
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Zm00001d015194_P001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G64350.1 | Zm00001d015194_P001 | AT3G54170.1 | 9807817 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES07562 | Sorghum | cytosol, mitochondrion, plastid | 94.64 | 94.64 |
| Os02t0760300-01 | Rice | extracellular | 89.29 | 89.29 |
| Solyc01g105710.2.1 | Tomato | extracellular | 83.93 | 83.93 |
| PGSC0003DMT400083778 | Potato | cytosol | 83.93 | 83.93 |
| KRH21780 | Soybean | cytosol, mitochondrion, plastid | 82.14 | 82.14 |
| VIT_03s0017g01060.t01 | Wine grape | cytosol, mitochondrion, plastid | 80.36 | 80.36 |
| CDY46798 | Canola | cytosol | 52.68 | 79.73 |
| AT5G64350.1 | Thale cress | cytosol, mitochondrion, plastid | 77.68 | 77.68 |
| Bra037775.1-P | Field mustard | cytosol, mitochondrion, plastid | 77.68 | 77.68 |
| CDX84517 | Canola | cytosol, mitochondrion, plastid | 76.79 | 76.79 |
| Bra024287.1-P | Field mustard | cytosol, mitochondrion, plastid | 74.11 | 74.11 |
| CDY58272 | Canola | cytosol, mitochondrion, plastid | 74.11 | 74.11 |
| CDX81222 | Canola | cytosol, mitochondrion, plastid | 72.32 | 72.32 |
| CDY18714 | Canola | endoplasmic reticulum, extracellular | 76.79 | 66.67 |
| KRH10589 | Soybean | cytosol | 83.04 | 66.43 |
| GSMUA_Achr5P05550_001 | Banana | cytosol, mitochondrion, plastid | 62.5 | 57.85 |
| TraesCS6A01G314100.1 | Wheat | plastid | 87.5 | 50.78 |
| TraesCS6D01G293400.1 | Wheat | cytosol | 87.5 | 50.26 |
| TraesCS6B01G344100.1 | Wheat | plastid | 87.5 | 50.26 |
| CDY31323 | Canola | extracellular | 57.14 | 48.48 |
| HORVU6Hr1G077340.1 | Barley | mitochondrion | 83.93 | 39.0 |
| Zm00001d038368_P002 | Maize | extracellular | 38.39 | 17.13 |
| Zm00001d031569_P001 | Maize | plasma membrane | 44.64 | 8.62 |
| Zm00001d004243_P001 | Maize | cytosol | 41.96 | 7.99 |
| Zm00001d004930_P001 | Maize | mitochondrion | 25.0 | 7.49 |
| Zm00001d016512_P002 | Maize | cytosol | 41.96 | 5.89 |
| Zm00001d047426_P003 | Maize | cytosol | 33.93 | 5.79 |
| Zm00001d029272_P002 | Maize | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:18.12.2 | Gene3D:3.10.50.40 | EntrezGene:542519 | ProteinID:AQK75117.1 | EMBL:AY754697 | EMBL:EU952557 |
| EMBL:EU952564 | EMBL:EU959401 | EMBL:EU960086 | EMBL:EU976407 | GO:GO:0000413 | GO:GO:0003674 |
| GO:GO:0003755 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005829 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016853 |
| GO:GO:0019538 | InterPro:IPR001179 | PFAM:PF00254 | InterPro:PPIase_FKBP | InterPro:PPIase_FKBP_dom | PFscan:PS50059 |
| PANTHER:PTHR10516 | PANTHER:PTHR10516:SF214 | UniProt:Q5XLE1 | SUPFAM:SSF54534 | UniParc:UPI000044FF4E | EnsemblPlantsGene:Zm00001d018134 |
| EnsemblPlants:Zm00001d018134_P001 | EnsemblPlants:Zm00001d018134_T001 | : | : | : | : |
Description
Peptidyl-prolyl cis-trans isomerase FKBP12
Coordinates
chr5:-:215050035..215052015
Molecular Weight (calculated)
12185.6 Da
IEP (calculated)
8.717
GRAVY (calculated)
-0.318
Length
112 amino acids
Sequence
(BLAST)
(BLAST)
001: MGFEKQILRS GTGPKPIKGQ KVTVHCTGYG KDRDLSKKFW STKDPGQQPF SFSIGQGSVI KGWDEGVMTM QVGEVARIQC TPDYAYGAGG FPAWGIQPNS
101: VLVFEIEVLS AQ
101: VLVFEIEVLS AQ
001: MGVEKQVIRP GNGPKPAPGQ TVTVHCTGFG KDGDLSQKFW STKDEGQKPF SFQIGKGAVI KGWDEGVIGM QIGEVARLRC SSDYAYGAGG FPAWGIQPNS
101: VLDFEIEVLS VQ
101: VLDFEIEVLS VQ
Arabidopsis Description
FKBP12Peptidyl-prolyl cis-trans isomerase FKBP12 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGG0]
SUBAcon: [cytosol,plastid,mitochondrion]
SUBAcon: [cytosol,plastid,mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.