Factsheet for Bra024287.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1
nucleus 1
cytosol 1
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra003173.1-P
Bra003174.1-P
Bra007052.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT5G64350.1	Bra003173.1-P	AT3G54170.1	9807817
AT5G64350.1	Bra003174.1-P	AT3G54170.1	9807817
AT5G64350.1	Bra007052.1-P	AT3G54170.1	9807817

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY58272	Canola	cytosol, mitochondrion, plastid	99.11	99.11
Bra037775.1-P	Field mustard	cytosol, mitochondrion, plastid	90.18	90.18
AT5G64350.1	Thale cress	cytosol, mitochondrion, plastid	87.5	87.5
KRH21780	Soybean	cytosol, mitochondrion, plastid	82.14	82.14
VIT_03s0017g01060.t01	Wine grape	cytosol, mitochondrion, plastid	78.57	78.57
Solyc01g105710.2.1	Tomato	extracellular	77.68	77.68
PGSC0003DMT400083778	Potato	cytosol	76.79	76.79
Zm00001d018134_P001	Maize	mitochondrion	74.11	74.11
Os02t0760300-01	Rice	extracellular	72.32	72.32
EES07562	Sorghum	cytosol, mitochondrion, plastid	72.32	72.32
KRH10589	Soybean	cytosol	81.25	65.0
GSMUA_Achr5P05550_001	Banana	cytosol, mitochondrion, plastid	56.25	52.07
TraesCS6A01G314100.1	Wheat	plastid	74.11	43.01
TraesCS6B01G344100.1	Wheat	plastid	74.11	42.56
TraesCS6D01G293400.1	Wheat	cytosol	74.11	42.56
HORVU6Hr1G077340.1	Barley	mitochondrion	70.54	32.78
Bra007173.1-P	Field mustard	nucleus	36.61	21.58
Bra006895.1-P	Field mustard	cytosol	26.79	8.22
Bra012823.1-P	Field mustard	cytosol	25.0	7.84
Bra037477.1-P	Field mustard	cytosol	39.29	7.68
Bra013224.1-P	Field mustard	cytosol	38.39	7.58
Bra014849.1-P	Field mustard	cytosol	29.46	5.14
Bra003166.1-P	Field mustard	cytosol	28.57	4.95

Protein Annotations

MapMan:18.12.2	Gene3D:3.10.50.40	EnsemblPlantsGene:Bra024287	EnsemblPlants:Bra024287.1	EnsemblPlants:Bra024287.1-P	GO:GO:0000413
GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	InterPro:IPR001179	UniProt:M4E683	PFAM:PF00254
InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50059	PANTHER:PTHR10516	PANTHER:PTHR10516:SF214	SUPFAM:SSF54534
UniParc:UPI000253F3AA	:	:	:	:	:

Description

AT5G64350 (E=1e-055) FKBP12, ATFKBP12 | FKBP12 (FK506-BINDING PROTEIN); FK506 binding / peptidyl-prolyl cis-trans isomerase

Coordinates

chrA06:-:14750016..14751037

Molecular Weight (calculated)

11989.3 Da

IEP (calculated)

5.827

GRAVY (calculated)

-0.212

Length

112 amino acids

Sequence
(BLAST)

001: MGVEKQVIRP GTGAKPAPGQ TVTVHCTGFG KGGDLSQQFW STKDAGQKPF SFQIGQGAVI KGWDEGVMGM QIGEIARLRC SPDYAYGPAG FPAWGIQRNS
101: VLEFEIEVLS VE

Best Arabidopsis Sequence Match ( AT5G64350.1 )
(BLAST)

001: MGVEKQVIRP GNGPKPAPGQ TVTVHCTGFG KDGDLSQKFW STKDEGQKPF SFQIGKGAVI KGWDEGVIGM QIGEVARLRC SSDYAYGAGG FPAWGIQPNS
101: VLDFEIEVLS VQ

Arabidopsis Description

FKBP12Peptidyl-prolyl cis-trans isomerase FKBP12 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGG0]
SUBAcon: [mitochondrion,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.