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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • mitochondrion 5
PPI

Inferred distinct locusB in Crop

locusBlocations
HORVU7Hr1G048110.2

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT5G64350.1 HORVU7Hr1G048110.2 AT3G54170.1 9807817
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G293400.1 Wheat cytosol 73.86 91.28
TraesCS6A01G314100.1 Wheat plastid 71.78 89.64
TraesCS6B01G344100.1 Wheat plastid 72.2 89.23
EES07562 Sorghum cytosol, mitochondrion, plastid 40.25 86.61
Zm00001d018134_P001 Maize mitochondrion 39.0 83.93
Os02t0760300-01 Rice extracellular 37.34 80.36
Solyc01g105710.2.1 Tomato extracellular 36.93 79.46
PGSC0003DMT400083778 Potato cytosol 36.93 79.46
VIT_03s0017g01060.t01 Wine grape cytosol, mitochondrion, plastid 36.1 77.68
KRH21780 Soybean cytosol, mitochondrion, plastid 35.68 76.79
Bra037775.1-P Field mustard cytosol, mitochondrion, plastid 34.85 75.0
CDY46798 Canola cytosol 22.82 74.32
AT5G64350.1 Thale cress cytosol, mitochondrion, plastid 34.02 73.21
CDX84517 Canola cytosol, mitochondrion, plastid 34.02 73.21
Bra024287.1-P Field mustard cytosol, mitochondrion, plastid 32.78 70.54
CDY58272 Canola cytosol, mitochondrion, plastid 32.78 70.54
CDX81222 Canola cytosol, mitochondrion, plastid 32.78 70.54
CDY18714 Canola endoplasmic reticulum, extracellular 34.44 64.34
KRH10589 Soybean cytosol 35.68 61.43
GSMUA_Achr5P05550_001 Banana cytosol, mitochondrion, plastid 29.46 58.68
CDY31323 Canola extracellular 26.97 49.24
HORVU1Hr1G072570.7 Barley cytosol, nucleus, plastid 18.67 16.36
HORVU2Hr1G008030.1 Barley cytosol, nucleus 3.73 11.84
HORVU7Hr1G053170.6 Barley cytosol 20.75 8.83
HORVU2Hr1G067750.9 Barley cytosol 21.16 8.61
HORVU2Hr1G007980.1 Barley cytosol, mitochondrion 22.82 8.17
HORVU5Hr1G041060.1 Barley cytosol, plastid 13.28 7.53
HORVU4Hr1G042800.9 Barley cytosol 17.84 6.48
Protein Annotations
MapMan:18.12.2Gene3D:3.10.50.40UniProt:A0A287UT13GO:GO:0000413GO:GO:0003674GO:GO:0003755
GO:GO:0003824GO:GO:0006464GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016853
GO:GO:0019538EnsemblPlantsGene:HORVU6Hr1G077340EnsemblPlants:HORVU6Hr1G077340.1InterPro:IPR001179PFAM:PF00254InterPro:PPIase_FKBP
InterPro:PPIase_FKBP_domPFscan:PS50059PANTHER:PTHR10516PANTHER:PTHR10516:SF214SUPFAM:SSF54534UniParc:UPI000B478FE7
SEG:seg:::::
Description
Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A287UT13]
Coordinates
chrchr6H:+:529873055..529879938
Molecular Weight (calculated)
25601.9 Da
IEP (calculated)
9.623
GRAVY (calculated)
-0.232
Length
241 amino acids
Sequence
(BLAST)
001: MLVCPHGRCL SGTRHQAPGL VRCPLVHSFS THLLLLSAPP TFPLEMRAEL LLLGGKVSTA AAASGAAAAS LAGAGRCVAG GRRLAPVQPA ALQWRHSSRT
101: RTHTTTDQRP PHQRCAAAEL WRGDAEDGKM GIQKEILRAG TGPKPVKGQK VTVHCTGYGK DGDLSKKFWS TKDPGQQPFA FNIGLGSVIK GWDEGVMDMQ
201: LGEVARLKCT PDYAYGSGGS PAWGIQPNSE LIFEIEVLSA K
Best Arabidopsis Sequence Match ( AT5G64350.1 )
(BLAST)
001: MGVEKQVIRP GNGPKPAPGQ TVTVHCTGFG KDGDLSQKFW STKDEGQKPF SFQIGKGAVI KGWDEGVIGM QIGEVARLRC SSDYAYGAGG FPAWGIQPNS
101: VLDFEIEVLS VQ
Arabidopsis Description
FKBP12Peptidyl-prolyl cis-trans isomerase FKBP12 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGG0]
SUBAcon: [mitochondrion,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.