Factsheet for HORVU1Hr1G072570.7

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus, cytosol

Predictor Summary:

nucleus 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, nucleus, plastid
Any Predictor:	cytosol, nucleus, plastid
MultiLoc:	nucleus
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU3Hr1G018030.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G55520.1	HORVU3Hr1G018030.1	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os05t0458100-01	Rice	nucleus	64.73	95.7
TraesCS1D01G282500.1	Wheat	nucleus	68.73	93.56
TraesCS1B01G292400.1	Wheat	nucleus	68.36	93.07
EES19645	Sorghum	nucleus	62.91	93.01
VIT_13s0019g01900.t01	Wine grape	cytosol	55.64	81.38
Solyc04g011620.2.1	Tomato	nucleus	54.91	81.18
PGSC0003DMT400016257	Potato	nucleus	54.91	81.18
KRG97894	Soybean	cytosol	55.27	80.85
GSMUA_AchrUn_...	Banana	nucleus	54.91	80.32
KRH30990	Soybean	cytosol	54.18	79.26
AT3G55520.1	Thale cress	nucleus	53.09	76.84
Bra007173.1-P	Field mustard	nucleus	52.36	75.79
CDY40236	Canola	nucleus	52.36	75.79
Zm00001d038368_P002	Maize	extracellular	68.36	74.9
CDY41214	Canola	nucleus	51.64	74.74
HORVU6Hr1G077340.1	Barley	mitochondrion	16.36	18.67
HORVU7Hr1G053170.6	Barley	cytosol	25.09	12.19
HORVU2Hr1G067750.9	Barley	cytosol	25.45	11.82
HORVU2Hr1G007980.1	Barley	cytosol, mitochondrion	24.73	10.1
HORVU5Hr1G041060.1	Barley	cytosol, plastid	13.45	8.71
HORVU4Hr1G042800.9	Barley	cytosol	17.45	7.23
HORVU2Hr1G008030.1	Barley	cytosol, nucleus	1.45	5.26

Protein Annotations

MapMan:18.12.2	Gene3D:3.10.50.40	UniProt:A0A287G6W4	ncoils:Coil	GO:GO:0000413	GO:GO:0003674
GO:GO:0003755	GO:GO:0003824	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016853	GO:GO:0019538	EnsemblPlantsGene:HORVU1Hr1G072570	EnsemblPlants:HORVU1Hr1G072570.7	InterPro:IPR001179	PFAM:PF00254
InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50059	PANTHER:PTHR10516	PANTHER:PTHR10516:SF326	SUPFAM:SSF54534
UniParc:UPI000B47AB3D	SEG:seg	:	:	:	:

Description

Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A287G6W4]

Coordinates

chrchr1H:-:498204148..498207987

Molecular Weight (calculated)

29283.0 Da

IEP (calculated)

9.089

GRAVY (calculated)

-0.407

Length

275 amino acids

Sequence
(BLAST)

001: MMRRFMHCGD QPVSVRSTGG GDRIESAEGH PPVKITRSQS SDSLPLPLVP SRSVLTVHHP LPISAKVLAG VPGATAVAPN RESPFYSKAM AETIDLTGDG
101: GVLKTVVRKA KDDAISPSDS LPLVDVHYEG TLAENGEVFD TTHEDNSIFS FEVGQGAVIK AWDLALRTMK VGEVAKITCK PEYAYGSAGS PPEIPANATL
201: IFEVELVACK PRKGSSLGSV SDEKARLEEL KKQRELAAAT KEEEKKKREE AKAAAAARVQ AKLDAKKGKG KGKGK

Best Arabidopsis Sequence Match ( AT3G55520.2 )
(BLAST)

001: MGDAIDLSGD GGVLKKIVRS AKPDAISPSD DLPVVDVHYE GILAEDEKVF DTTREDNLVF SFELGTGSVI RSWDIALKTM KVGEVAKITC KPEYAYGRAG
101: SPPDIPPDAT LIFEVELVAC RPRKGASVGS VSEERARLED LKKQREIAAA AKEDDKKKRE EAKAAAAARI QAKLDAKKGP GKGKGKGKAK

Arabidopsis Description

FKBP20-1Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178VDC9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.