Factsheet for HORVU5Hr1G041060.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
TargetP:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU2Hr1G080200.1
HORVU2Hr1G103620.1
HORVU2Hr1G115180.1
HORVU7Hr1G063020.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G21640.1	HORVU2Hr1G103620.1	AT2G34660.1	15133126
AT3G21640.1	HORVU7Hr1G063020.3	AT2G36910.1	14517332
AT3G21640.1	HORVU2Hr1G080200.1	AT3G28860.1	14517332
AT3G21640.1	HORVU2Hr1G115180.1	AT3G28860.1	14517332

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G134500.3	Wheat	cytosol	83.53	96.21
TraesCS5B01G131200.1	Wheat	cytosol	83.29	95.68
TraesCS5D01G139000.1	Wheat	cytosol	83.06	95.41
Os11t0148300-01	Rice	cytosol	72.94	82.67
EES07974	Sorghum	cytosol	71.53	82.61
Zm00001d004930_P001	Maize	mitochondrion	71.53	81.28
CDY34049	Canola	cytosol	18.35	77.23
VIT_13s0064g00580.t01	Wine grape	cytosol	61.65	71.78
GSMUA_Achr6P12690_001	Banana	cytosol	60.24	68.45
KRH23877	Soybean	cytosol, endoplasmic reticulum, nucleus	58.35	67.03
PGSC0003DMT400017681	Potato	cytosol	57.88	66.85
CDX78057	Canola	cytosol	55.06	66.1
Bra006895.1-P	Field mustard	cytosol	56.71	66.03
KRH39924	Soybean	endoplasmic reticulum	57.18	65.68
CDY29061	Canola	cytosol	55.06	65.55
AT3G21640.1	Thale cress	cytosol	55.76	64.93
Bra012823.1-P	Field mustard	cytosol	54.35	64.71
Solyc01g087470.2.1	Tomato	cytosol	49.41	64.62
CDX73664	Canola	cytosol	56.0	63.81
CDX90622	Canola	cytosol	56.24	60.51
CDY64639	Canola	endoplasmic reticulum, extracellular	38.12	60.45
HORVU2Hr1G067750.9	Barley	cytosol	23.29	16.72
HORVU7Hr1G053170.6	Barley	cytosol	22.12	16.61
HORVU1Hr1G072570.7	Barley	cytosol, nucleus, plastid	8.71	13.45
HORVU4Hr1G042800.9	Barley	cytosol	20.94	13.4
HORVU6Hr1G077340.1	Barley	mitochondrion	7.53	13.28
HORVU2Hr1G007980.1	Barley	cytosol, mitochondrion	20.71	13.08
HORVU2Hr1G008030.1	Barley	cytosol, nucleus	1.88	10.53

Protein Annotations

Gene3D:1.25.40.10	MapMan:18.12.2	Gene3D:3.10.50.40	UniProt:A0A287QXM7	GO:GO:0000413	GO:GO:0003674
GO:GO:0003755	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005516	GO:GO:0005575
GO:GO:0005623	GO:GO:0005886	GO:GO:0006464	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016853	GO:GO:0019538	GO:GO:0048366	EnsemblPlantsGene:HORVU5Hr1G041060
EnsemblPlants:HORVU5Hr1G041060.1	InterPro:IPR001179	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	PFAM:PF00254
InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50005	PFscan:PS50059	PFscan:PS50293	PANTHER:PTHR43811
PANTHER:PTHR43811:SF21	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF54534	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
InterPro:TPR_repeat	UniParc:UPI000B4770C9	SEG:seg	:	:	:

Description

Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A287QXM7]

Coordinates

chrchr5H:-:309186147..309190565

Molecular Weight (calculated)

47403.7 Da

IEP (calculated)

8.459

GRAVY (calculated)

-0.572

Length

425 amino acids

Sequence
(BLAST)

001: DTPIVLHRLQ VEEVTVCSAL LISSTPPPPT QPRPARLPAR SDCRHARRCR ANRXXXXXXA PAPAPAPASD PTAGSSDDEI TVENASFVHT EPPQDGSAPP
101: VVTTDMEVLH DKVKKQVIKE GHGKIPSKFS TCFVHYRAWV QSSMHKFEDT WQEQHPVEIV IGKEKKQMAG LGIGVGHMKG GERALLHVSW ELGYGKEGSF
201: SFPNVPPSAD LIYEVELIGF DDAKEGKARS DMTVEERIEA ADRRKLEGND YFKEKKFEVA MQQYEMAVAY MGDDFMFQLF GKYRDMALAV KNPCHLNMAA
301: CLIKQKRFDE AIAQCSIVLS EDETNAKALF RRGKARAELG QTESAREDFL KAKRHSPEDK EIMRELRSLA EQDKALYQKQ RELYKGLFGP RPQPKPKAKN
401: FAVLFWQWLV SLVRYLARMF TRKND

Best Arabidopsis Sequence Match ( AT3G21640.1 )
(BLAST)

001: MDESLEHQTQ THDQESEIVT EGSAVVHSEP SQEGNVPPKV DSEAEVLDEK VSKQIIKEGH GSKPSKYSTC FLHYRAWTKN SQHKFEDTWH EQQPIELVLG
101: KEKKELAGLA IGVASMKSGE RALVHVGWEL AYGKEGNFSF PNVPPMADLL YEVEVIGFDE TKEGKARSDM TVEERIGAAD RRKMDGNSLF KEEKLEEAMQ
201: QYEMAIAYMG DDFMFQLYGK YQDMALAVKN PCHLNIAACL IKLKRYDEAI GHCNIVLTEE EKNPKALFRR GKAKAELGQM DSARDDFRKA QKYAPDDKAI
301: RRELRALAEQ EKALYQKQKE MYKGIFKGKD EGGAKSKSLF WLIVLWQWFV SLFSRIFRRH RVKAD

Arabidopsis Description

FKBP42Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178V6X3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.