Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G008030.1 | Barley | cytosol, nucleus | 11.29 | 100.0 |
| TraesCS2D01G050300.1 | Wheat | cytosol | 90.49 | 93.84 |
| TraesCS2B01G063900.1 | Wheat | cytosol | 88.41 | 93.26 |
| TraesCS2A01G050600.3 | Wheat | cytosol | 85.74 | 89.04 |
| Os02t0491400-01 | Rice | plasma membrane | 73.11 | 72.14 |
| HORVU2Hr1G067750.9 | Barley | cytosol | 60.48 | 68.75 |
| HORVU7Hr1G053170.6 | Barley | cytosol | 57.5 | 68.37 |
| OQU84952 | Sorghum | cytosol | 71.92 | 67.79 |
| Zm00001d016512_P002 | Maize | cytosol | 72.36 | 61.03 |
| HORVU4Hr1G042800.9 | Barley | cytosol | 26.0 | 26.36 |
| HORVU1Hr1G072570.7 | Barley | cytosol, nucleus, plastid | 10.1 | 24.73 |
| HORVU6Hr1G077340.1 | Barley | mitochondrion | 8.17 | 22.82 |
| HORVU5Hr1G041060.1 | Barley | cytosol, plastid | 13.08 | 20.71 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:18.12.2 | Gene3D:3.10.50.40 | Gene3D:3.30.1670.20 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | EnsemblPlantsGene:HORVU2Hr1G007980 | EnsemblPlants:HORVU2Hr1G007980.1 | InterPro:IPR001179 | InterPro:IPR011990 |
| InterPro:IPR013026 | InterPro:IPR019734 | PFAM:PF00254 | PFAM:PF13181 | InterPro:PPIase_FKBP | InterPro:PPIase_FKBP_dom |
| PFscan:PS50005 | PFscan:PS50059 | PFscan:PS50293 | PANTHER:PTHR10516 | PANTHER:PTHR10516:SF338 | SMART:SM00028 |
| SUPFAM:SSF48452 | SUPFAM:SSF54534 | TMHMM:TMhelix | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:16636961..16751735
Molecular Weight (calculated)
74896.2 Da
IEP (calculated)
5.327
GRAVY (calculated)
-0.588
Length
673 amino acids
Sequence
(BLAST)
(BLAST)
001: ARRTRCKHSL LQAPTSRTRN PEEMDDDLGL GFPGAGGYDA MAGSATDDEE DDQAMKSLYA GAAPAPAEEE EEIDEGYAVA AMKAGEERGV GKEGLRKRLV
101: REGEGSQLPG AGDEVEXHYT GTLADGTNFD SSRDRGAPFR FTLGRGQVIK GWDLGIKTMK RGENAIFTIP PELAYGEDGS PPVIPPNATL QFDVELLSWA
201: SVKDICKDGS IFKKILAEGE KWENPKDRDE VFVKYEARLE DGTLVTKSDG VEFTVKEGHF CPAVSKAIKT MKKNEKALLT VKPQYGFGGQ GRPASRGEAA
301: VPPNAMLQID LQLVSWKTVT EIGNDKTILK KILQEGEGYD RPKDCSTVKV KLIGKLDDGT MFVKKGHDGE EPFEFKTDED QVIDGLDKAV LSMKKGEVAF
401: VTIPPEHAFG SDETKHDLAI VPPNTTVYYD IELVSFDKEK ESWEIKDNAE KIEAAAKKKD EGNVWFKMGK YSRASKRYGK ALDFIEYESS FSEEEKQLSK
501: PLKLSCKLNK AACKLKLKDY KEAKELCTKV LEMDSTNVKA LYRRAQAHMH LVDLDLAELD IKRALEIDPE NRDVKMGYRR LKEKVKEYER RDAKFYGNMI
601: DKLSKLEDDE GCRSSQGPSK KPRGLWPLAP FFTTDGSKLW LVLRLLIPVM ILVALCVAYY VQGGVHEIDC MNC
101: REGEGSQLPG AGDEVEXHYT GTLADGTNFD SSRDRGAPFR FTLGRGQVIK GWDLGIKTMK RGENAIFTIP PELAYGEDGS PPVIPPNATL QFDVELLSWA
201: SVKDICKDGS IFKKILAEGE KWENPKDRDE VFVKYEARLE DGTLVTKSDG VEFTVKEGHF CPAVSKAIKT MKKNEKALLT VKPQYGFGGQ GRPASRGEAA
301: VPPNAMLQID LQLVSWKTVT EIGNDKTILK KILQEGEGYD RPKDCSTVKV KLIGKLDDGT MFVKKGHDGE EPFEFKTDED QVIDGLDKAV LSMKKGEVAF
401: VTIPPEHAFG SDETKHDLAI VPPNTTVYYD IELVSFDKEK ESWEIKDNAE KIEAAAKKKD EGNVWFKMGK YSRASKRYGK ALDFIEYESS FSEEEKQLSK
501: PLKLSCKLNK AACKLKLKDY KEAKELCTKV LEMDSTNVKA LYRRAQAHMH LVDLDLAELD IKRALEIDPE NRDVKMGYRR LKEKVKEYER RDAKFYGNMI
601: DKLSKLEDDE GCRSSQGPSK KPRGLWPLAP FFTTDGSKLW LVLRLLIPVM ILVALCVAYY VQGGVHEIDC MNC
001: MDANFEMPPV GGMNDDDDMD FGDGASFLKV GEEKEIQQGL KKKLLKEGEG YETPENGDEV EVHYTGTLLD GTKFDSSRDR ATPFKFTLGQ GQVIKGWDIG
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLSK E
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLSK E
Arabidopsis Description
ROF1Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:B3H746]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.