Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G050300.1 | Wheat | cytosol | 95.92 | 94.3 |
| TraesCS2A01G050600.3 | Wheat | cytosol | 91.85 | 90.43 |
| HORVU2Hr1G007980.1 | Barley | cytosol, mitochondrion | 93.26 | 88.41 |
| Os02t0491400-01 | Rice | plasma membrane | 77.12 | 72.14 |
| TraesCS7B01G153100.1 | Wheat | golgi | 60.97 | 69.59 |
| TraesCS2B01G294500.1 | Wheat | cytosol | 63.32 | 68.82 |
| OQU84952 | Sorghum | cytosol | 74.45 | 66.53 |
| Zm00001d016512_P002 | Maize | cytosol | 74.76 | 59.77 |
| TraesCS1B01G292400.1 | Wheat | nucleus | 10.03 | 31.68 |
| TraesCS1B01G192700.1 | Wheat | cytosol, mitochondrion | 25.86 | 27.18 |
| TraesCS6B01G344100.1 | Wheat | plastid | 8.15 | 26.67 |
| TraesCS5B01G131200.1 | Wheat | cytosol | 14.11 | 24.32 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:18.12.2 | Gene3D:3.10.50.40 | Gene3D:3.30.1670.20 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001179 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 |
| PFAM:PF00254 | PFAM:PF00515 | PFAM:PF13181 | InterPro:PPIase_FKBP | InterPro:PPIase_FKBP_dom | PFscan:PS50005 |
| PFscan:PS50059 | PFscan:PS50293 | PANTHER:PTHR10516 | PANTHER:PTHR10516:SF338 | SMART:SM00028 | SUPFAM:SSF48452 |
| SUPFAM:SSF54534 | TMHMM:TMhelix | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_1 | InterPro:TPR_repeat |
| EnsemblPlantsGene:TraesCS2B01G063900 | EnsemblPlants:TraesCS2B01G063900.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2B:+:30494613..30499333
Molecular Weight (calculated)
71305.1 Da
IEP (calculated)
5.240
GRAVY (calculated)
-0.531
Length
638 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDLLGLGFP GPGGYDGEDE EAMRSLYAGA PAEEEEEVDE GYAVAAMKAG DERGIGKEGL RKRLLREGEG SQLPGAGDEV EVHYTGTLAD GTKFDSSRDR
101: GAPFRFTLGR GQVIKGWDLG IKTMKRGENA IFTIPPELAY GEDGSPPVIP PNAKLQFDVE LLSWASVKDI CKDSSIFKKI LAEGEKWENP KDRDEVFVKY
201: EARLEDGTLI TKSDGIEFTV KEGHFCPAIS KAVKTMKKNE KALLTVKPQY GFGEQGRPAS RDEAAVPPNA MLHIDLQLVS WKTVAEIGND KTILKKILQE
301: GEGYDRPKDC STVKVKLIGK LDDGTIFVKK GHDGQEPFEF KTDEDQVIQG LDAAVLSMKR GEIAFVTIPP EHAFGSDETK QDLAIVPPNT TVYYDVELVS
401: FDKEKESWEL KDNAEKIEAA AKKKDEGNVW FKMGKYARAS KRYGKALDFI EYESSFSEEE KQLSKPLKVS CKLNKAACKL KLKDYKEAKE LCTKVLEIDS
501: TNVKALYRRA QAHMHLVDFD LAEVDIKRAL EIDPENRDVK MGYRRLKEKV KEYERRDAKF YGNMINKLSK LEDDEGCGSS QGPSKKPRSL WPLAPFFTTD
601: GSKLWLVLRL LIPVMILVAL CVAYYVQSGV HEIDCVNC
101: GAPFRFTLGR GQVIKGWDLG IKTMKRGENA IFTIPPELAY GEDGSPPVIP PNAKLQFDVE LLSWASVKDI CKDSSIFKKI LAEGEKWENP KDRDEVFVKY
201: EARLEDGTLI TKSDGIEFTV KEGHFCPAIS KAVKTMKKNE KALLTVKPQY GFGEQGRPAS RDEAAVPPNA MLHIDLQLVS WKTVAEIGND KTILKKILQE
301: GEGYDRPKDC STVKVKLIGK LDDGTIFVKK GHDGQEPFEF KTDEDQVIQG LDAAVLSMKR GEIAFVTIPP EHAFGSDETK QDLAIVPPNT TVYYDVELVS
401: FDKEKESWEL KDNAEKIEAA AKKKDEGNVW FKMGKYARAS KRYGKALDFI EYESSFSEEE KQLSKPLKVS CKLNKAACKL KLKDYKEAKE LCTKVLEIDS
501: TNVKALYRRA QAHMHLVDFD LAEVDIKRAL EIDPENRDVK MGYRRLKEKV KEYERRDAKF YGNMINKLSK LEDDEGCGSS QGPSKKPRSL WPLAPFFTTD
601: GSKLWLVLRL LIPVMILVAL CVAYYVQSGV HEIDCVNC
001: MDANFEMPPV GGMNDDDDMD FGDGASFLKV GEEKEIQQGL KKKLLKEGEG YETPENGDEV EVHYTGTLLD GTKFDSSRDR ATPFKFTLGQ GQVIKGWDIG
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLSK E
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLSK E
Arabidopsis Description
ROF1Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:B3H746]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.