Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G277100.1 | Wheat | cytosol | 95.74 | 96.56 |
| TraesCS2D01G276000.2 | Wheat | cytosol | 95.91 | 95.91 |
| HORVU2Hr1G067750.9 | Barley | cytosol | 95.23 | 94.43 |
| Os04t0352400-01 | Rice | mitochondrion, plasma membrane | 81.26 | 81.54 |
| EER88340 | Sorghum | cytosol | 80.75 | 80.07 |
| Zm00001d004243_P001 | Maize | cytosol | 79.05 | 78.91 |
| TraesCS7B01G153100.1 | Wheat | golgi | 72.06 | 75.67 |
| TraesCS2B01G063900.1 | Wheat | cytosol | 68.82 | 63.32 |
| TraesCS1B01G292400.1 | Wheat | nucleus | 11.24 | 32.67 |
| TraesCS5B01G131200.1 | Wheat | cytosol | 16.87 | 26.76 |
| TraesCS6B01G344100.1 | Wheat | plastid | 8.86 | 26.67 |
| TraesCS1B01G192700.1 | Wheat | cytosol, mitochondrion | 26.92 | 26.03 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:18.12.2 | Gene3D:3.10.50.40 | Gene3D:3.30.1670.20 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001179 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 |
| PFAM:PF00254 | PFAM:PF00515 | InterPro:PPIase_FKBP | InterPro:PPIase_FKBP_dom | PFscan:PS50005 | PFscan:PS50059 |
| PFscan:PS50293 | PANTHER:PTHR10516 | PANTHER:PTHR10516:SF338 | SMART:SM00028 | SUPFAM:SSF48452 | SUPFAM:SSF54534 |
| InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_1 | InterPro:TPR_repeat | EnsemblPlantsGene:TraesCS2B01G294500 | EnsemblPlants:TraesCS2B01G294500.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2B:-:411140591..411143398
Molecular Weight (calculated)
65604.6 Da
IEP (calculated)
4.819
GRAVY (calculated)
-0.693
Length
587 amino acids
Sequence
(BLAST)
(BLAST)
001: MTAVEDETLR AFEEEEDAMM NEPDGEPMDG LDVDDEEEAD SPATMKVGEE KEIGKQGLKK KLVKEGEGWE RPETGDEVEV HYTGTLLDGT KFDSSRDRGT
101: PFKFKLEQGQ VIKGWDQGIK TMKKGENAVL TIPPDLAYGE AGSPPTIPPN ATLRFDVELL SWASVKDICK DGGIFKKVLV EGQKWENPKD LDEVTVKYEA
201: RLEDGSVVSK SESIEFAVKD GYFCPALSKA VKTMKKGEKV LLTVKPQYGF GEQGRAATEV EGAVPPNSTL HIDLQLVSWK TVTLIGDDKR ILKKVLKEGE
301: GYERPNDGAV VRVGLIGKLD DGTVFTKKGH EGDEPFEFKT DEEQVIQGLD TTVLTMKKGE VASARIPPEH AFGSTETKLD LAVVPPNSTV FYEVELVSFE
401: KEKESWDLKS NSEKIEAASE KKDEGNAWFK MGKYAKASKR YEKAAKYIEY DSSFSEDEKK QSKAVKISIK LNNAACKLKL KDYKEAEKLC TKVLELESTN
501: VKALYRRAQA YTELVDLELA ELDIKKALEI DPDNREVKVA YKALKDKLRE YNKRDAKFYG NMFAKWRKTE NAAGKQEAQP MAIDSTA
101: PFKFKLEQGQ VIKGWDQGIK TMKKGENAVL TIPPDLAYGE AGSPPTIPPN ATLRFDVELL SWASVKDICK DGGIFKKVLV EGQKWENPKD LDEVTVKYEA
201: RLEDGSVVSK SESIEFAVKD GYFCPALSKA VKTMKKGEKV LLTVKPQYGF GEQGRAATEV EGAVPPNSTL HIDLQLVSWK TVTLIGDDKR ILKKVLKEGE
301: GYERPNDGAV VRVGLIGKLD DGTVFTKKGH EGDEPFEFKT DEEQVIQGLD TTVLTMKKGE VASARIPPEH AFGSTETKLD LAVVPPNSTV FYEVELVSFE
401: KEKESWDLKS NSEKIEAASE KKDEGNAWFK MGKYAKASKR YEKAAKYIEY DSSFSEDEKK QSKAVKISIK LNNAACKLKL KDYKEAEKLC TKVLELESTN
501: VKALYRRAQA YTELVDLELA ELDIKKALEI DPDNREVKVA YKALKDKLRE YNKRDAKFYG NMFAKWRKTE NAAGKQEAQP MAIDSTA
001: MDANFEMPPV GGMNDDDDMD FGDGASFLKV GEEKEIQQGL KKKLLKEGEG YETPENGDEV EVHYTGTLLD GTKFDSSRDR ATPFKFTLGQ GQVIKGWDIG
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLRI IKRWRGNEHL RS
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLRI IKRWRGNEHL RS
Arabidopsis Description
ROF1Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:B3H746]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.