Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G276000.2 | Wheat | cytosol | 96.74 | 95.91 |
| TraesCS2B01G294500.1 | Wheat | cytosol | 96.56 | 95.74 |
| HORVU2Hr1G067750.9 | Barley | cytosol | 96.05 | 94.43 |
| Os04t0352400-01 | Rice | mitochondrion, plasma membrane | 82.13 | 81.71 |
| EER88340 | Sorghum | cytosol | 81.27 | 79.9 |
| Zm00001d004243_P001 | Maize | cytosol | 79.9 | 79.08 |
| TraesCS7A01G257100.1 | Wheat | cytosol | 72.68 | 75.67 |
| TraesCS2A01G050600.3 | Wheat | cytosol | 69.59 | 62.5 |
| TraesCS6A01G314100.1 | Wheat | plastid | 9.28 | 27.98 |
| TraesCS5A01G134500.3 | Wheat | cytosol | 16.84 | 26.56 |
| TraesCS1A01G184600.1 | Wheat | cytosol | 28.18 | 26.28 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:18.12.2 | Gene3D:3.10.50.40 | Gene3D:3.30.1670.20 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001179 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 |
| PFAM:PF00254 | PFAM:PF00515 | InterPro:PPIase_FKBP | InterPro:PPIase_FKBP_dom | PFscan:PS50005 | PFscan:PS50059 |
| PFscan:PS50293 | PANTHER:PTHR10516 | PANTHER:PTHR10516:SF338 | SMART:SM00028 | SUPFAM:SSF48452 | SUPFAM:SSF54534 |
| InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_1 | InterPro:TPR_repeat | EnsemblPlantsGene:TraesCS2A01G277100 | EnsemblPlants:TraesCS2A01G277100.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr2A:+:458051107..458053940
Molecular Weight (calculated)
64895.9 Da
IEP (calculated)
4.945
GRAVY (calculated)
-0.675
Length
582 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAVEDETLR AFEEEDDAMM NEPDGEPMDD EEEADSPATM KVGEEKEIGK QGLKKKLVKE GEGWERPETG DEVEVHYTGT LLDGAKFDSS RDRGTPFKFK
101: LGQGQVIKGW DQGIKTMKKG ENAVLTIPPD LAYGEAGSPP TIPPNATLRF DVELLSWASV KDICKDGGIF KKVLVEGQKW ENPKDLDEVT VKYEARLEDG
201: SVVSKSEGIE FAVKDGYFCP ALSKAVKTMK KGEKVLLTVK PQYGFGEQGR PASEVEGAVP PNSTLHIDLE LVSWKTVTLI GEDKRILKKV LKEGAGYERP
301: NDGAVVSVRL IGKLDDGTVF TKKGHEGDEP FEFRTDEEQV IEGLDTTVLT MKKGEVASAR IPPEHAFGST ETKLDLAVVP PNSTVFYEVE IVSFDKEKES
401: WDLKSNAEKI EAAAKKKDEG NAWFKMGKYA KASKRYEKAA KYIEYDSSFS EDEKKQSKAV KISIKLNNAA CKLKLKDYKE AEKLCTKVLE LESTNVKALY
501: RRAQAYTELV DLELAELDIK KALEIDPDNR EVKVAYKALK DKLREYNKRD AKFYGNMFAK WRKTENAAGK QDAQPMAIDS TA
101: LGQGQVIKGW DQGIKTMKKG ENAVLTIPPD LAYGEAGSPP TIPPNATLRF DVELLSWASV KDICKDGGIF KKVLVEGQKW ENPKDLDEVT VKYEARLEDG
201: SVVSKSEGIE FAVKDGYFCP ALSKAVKTMK KGEKVLLTVK PQYGFGEQGR PASEVEGAVP PNSTLHIDLE LVSWKTVTLI GEDKRILKKV LKEGAGYERP
301: NDGAVVSVRL IGKLDDGTVF TKKGHEGDEP FEFRTDEEQV IEGLDTTVLT MKKGEVASAR IPPEHAFGST ETKLDLAVVP PNSTVFYEVE IVSFDKEKES
401: WDLKSNAEKI EAAAKKKDEG NAWFKMGKYA KASKRYEKAA KYIEYDSSFS EDEKKQSKAV KISIKLNNAA CKLKLKDYKE AEKLCTKVLE LESTNVKALY
501: RRAQAYTELV DLELAELDIK KALEIDPDNR EVKVAYKALK DKLREYNKRD AKFYGNMFAK WRKTENAAGK QDAQPMAIDS TA
001: MDANFEMPPV GGMNDDDDMD FGDGASFLKV GEEKEIQQGL KKKLLKEGEG YETPENGDEV EVHYTGTLLD GTKFDSSRDR ATPFKFTLGQ GQVIKGWDIG
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLRI IKRWRGNEHL RS
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLRI IKRWRGNEHL RS
Arabidopsis Description
ROF1Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:B3H746]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.