Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- endoplasmic reticulum 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G050300.1 | Wheat | cytosol | 92.13 | 91.99 |
| TraesCS2B01G063900.1 | Wheat | cytosol | 90.43 | 91.85 |
| HORVU2Hr1G007980.1 | Barley | cytosol, mitochondrion | 89.04 | 85.74 |
| Os02t0491400-01 | Rice | plasma membrane | 75.77 | 71.99 |
| TraesCS7A01G257100.1 | Wheat | cytosol | 60.65 | 70.3 |
| TraesCS2A01G277100.1 | Wheat | cytosol | 62.5 | 69.59 |
| OQU84952 | Sorghum | cytosol | 72.22 | 65.55 |
| Zm00001d016512_P002 | Maize | cytosol | 72.99 | 59.27 |
| TraesCS1A01G184600.1 | Wheat | cytosol | 25.0 | 25.96 |
| TraesCS6A01G314100.1 | Wheat | plastid | 7.72 | 25.91 |
| TraesCS5A01G134500.3 | Wheat | cytosol | 13.58 | 23.85 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:18.12.2 | Gene3D:3.10.50.40 | Gene3D:3.30.1670.20 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001179 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 |
| PFAM:PF00254 | PFAM:PF00515 | PFAM:PF13181 | InterPro:PPIase_FKBP | InterPro:PPIase_FKBP_dom | PFscan:PS50005 |
| PFscan:PS50059 | PFscan:PS50293 | PANTHER:PTHR10516 | PANTHER:PTHR10516:SF338 | SMART:SM00028 | SUPFAM:SSF48452 |
| SUPFAM:SSF54534 | TMHMM:TMhelix | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_1 | InterPro:TPR_repeat |
| EnsemblPlantsGene:TraesCS2A01G050600 | EnsemblPlants:TraesCS2A01G050600.3 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2A:+:19646270..19652126
Molecular Weight (calculated)
72929.4 Da
IEP (calculated)
6.142
GRAVY (calculated)
-0.446
Length
648 amino acids
Sequence
(BLAST)
(BLAST)
001: MRSLYAAPAP AEEEEVDEGY AVAAMKAGEE RGVGKEGLRK RLVREGEGNQ LPGAGDEVEV HYTGTLVDGT KFDSSRDRDA PFQFTLGRGQ VIKGWDLGIK
101: TMKRGENAIF TIPPELAYGE DGSPPVIPPN ATLQFDVELL SWASVKDICK DGSIFKKILA EGEKWENPKD RDEVFVKYEA RLEDGTLVTK SDGVEFTVKD
201: GHFCPAIAKA VKTMKKNEKA LLTVKPQYGF GEQGRPASRD KAAVPPNAML HIDLQLVSWK TVTEIGNDKT ILKKILQEGE GYDRPKDCST VKVKLIGKLD
301: DGTIFVKKGH DGEEPFEFKT DEDQVIEGLD QAVLSMKKGE VAFVTIPPEH AFGSDETKQD LAIVPPNTTV YYDVELVSFD KEKESWELKA NAEKIEAAAK
401: KKDEGNVWFK MGKYARASKR YGKALDFIEY ESSFNEEEKQ LSKPLKVSCK LNKAACKLKL KDYKEAKDLC TEVLEIDSTN VKALYRRAQA HMHLVDFDLA
501: EVDIKRALEI DPENRDVKMG YRRLKEKVKE YERRDAKFYG NMINKLSKLE DDVSFLFPQT VCHFVTRRLL WPSFLQFIFI CCFQEGCGSS KGPSKKPRSL
601: WPLAPFFTTD GSKLWLVLRL LIPVMILVAL CVAYYVQSGV HEIDCVNC
101: TMKRGENAIF TIPPELAYGE DGSPPVIPPN ATLQFDVELL SWASVKDICK DGSIFKKILA EGEKWENPKD RDEVFVKYEA RLEDGTLVTK SDGVEFTVKD
201: GHFCPAIAKA VKTMKKNEKA LLTVKPQYGF GEQGRPASRD KAAVPPNAML HIDLQLVSWK TVTEIGNDKT ILKKILQEGE GYDRPKDCST VKVKLIGKLD
301: DGTIFVKKGH DGEEPFEFKT DEDQVIEGLD QAVLSMKKGE VAFVTIPPEH AFGSDETKQD LAIVPPNTTV YYDVELVSFD KEKESWELKA NAEKIEAAAK
401: KKDEGNVWFK MGKYARASKR YGKALDFIEY ESSFNEEEKQ LSKPLKVSCK LNKAACKLKL KDYKEAKDLC TEVLEIDSTN VKALYRRAQA HMHLVDFDLA
501: EVDIKRALEI DPENRDVKMG YRRLKEKVKE YERRDAKFYG NMINKLSKLE DDVSFLFPQT VCHFVTRRLL WPSFLQFIFI CCFQEGCGSS KGPSKKPRSL
601: WPLAPFFTTD GSKLWLVLRL LIPVMILVAL CVAYYVQSGV HEIDCVNC
001: MDANFEMPPV GGMNDDDDMD FGDGASFLKV GEEKEIQQGL KKKLLKEGEG YETPENGDEV EVHYTGTLLD GTKFDSSRDR ATPFKFTLGQ GQVIKGWDIG
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLSK E
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLSK E
Arabidopsis Description
ROF1Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:B3H746]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.