Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G063900.1 | Wheat | cytosol | 94.3 | 95.92 |
| TraesCS2A01G050600.3 | Wheat | cytosol | 91.99 | 92.13 |
| HORVU2Hr1G007980.1 | Barley | cytosol, mitochondrion | 93.84 | 90.49 |
| Os02t0491400-01 | Rice | plasma membrane | 77.04 | 73.31 |
| TraesCS7D01G257300.1 | Wheat | cytosol | 60.55 | 70.3 |
| TraesCS2D01G276000.2 | Wheat | cytosol | 63.17 | 69.85 |
| OQU84952 | Sorghum | cytosol | 75.04 | 68.21 |
| Zm00001d016512_P002 | Maize | cytosol | 75.5 | 61.4 |
| TraesCS1D01G282500.1 | Wheat | nucleus | 10.17 | 32.67 |
| TraesCS1D01G192100.3 | Wheat | cytosol | 25.42 | 26.44 |
| TraesCS6D01G293400.1 | Wheat | cytosol | 7.7 | 25.64 |
| TraesCS5D01G139000.1 | Wheat | cytosol | 14.18 | 24.86 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:18.12.2 | Gene3D:3.10.50.40 | Gene3D:3.30.1670.20 | ncoils:Coil | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | InterPro:IPR001179 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 |
| PFAM:PF00254 | PFAM:PF00515 | PFAM:PF13181 | InterPro:PPIase_FKBP | InterPro:PPIase_FKBP_dom | PFscan:PS50005 |
| PFscan:PS50059 | PFscan:PS50293 | PANTHER:PTHR10516 | PANTHER:PTHR10516:SF338 | SMART:SM00028 | SUPFAM:SSF48452 |
| SUPFAM:SSF54534 | TMHMM:TMhelix | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_1 | InterPro:TPR_repeat |
| EnsemblPlantsGene:TraesCS2D01G050300 | EnsemblPlants:TraesCS2D01G050300.1 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2D:+:18642131..18646326
Molecular Weight (calculated)
72074.8 Da
IEP (calculated)
4.987
GRAVY (calculated)
-0.515
Length
649 amino acids
Sequence
(BLAST)
(BLAST)
001: MDNLLGLGFP GAGGYDATAG SGDDEDEEAM KSLYAGAAAA PAPAEEEEVD EGYAVAAMKA GEERGIGKEG LRKRLVREGE GPQLPGAGDE VEVHYTGTLA
101: DGTKFDSSRD RDAPFRFTLG RGQVIKGWDL GIKTMKRGEN AIFTIPPELA YGEDGSPPVI PPNATLQFDV ELLSWASVKD ICKDGSIFKK ILAEGEKWEN
201: PKDCDEVFVK YEARLEDGTL ITKSDGIEFT VKEGHFCPAI SKAVKTMKKN EKALLTVKPQ YGFGEQGRPA SRGEAAVPPN AMLQIDLQLV SWKTVTEIGN
301: DKTILKKILQ EGEGYDRPKD CSTVKVKLIG KLDDGTMFVK KGHDGEEPFE FKTDEDQVIE GLDKAVLSMK KGEVAFVTIP PEHAFGSDET KQDLAVVPPN
401: TTVYYDVELV SFDKEKESWE LKDNAEKIEA AAKKKDEGNV WFKMGKYARA SKRYGKALDF IEYESSFNEE EKQLSKPLKV SCKLNKAACK LKLKDYKEAK
501: NLCTEVLEID STNVKALYRR AQAHMHLVDF DLAEVDIKRA LEIDPENRDV KMGYRRLKEK VKEYERRDAK FYGNMINKLS KLEDDEGCGS SQGPSKKPRS
601: LWPLAPFFTT DGSKLWLVLR LLIPVMILVA LCVAYYVQSG VHEIDCVNC
101: DGTKFDSSRD RDAPFRFTLG RGQVIKGWDL GIKTMKRGEN AIFTIPPELA YGEDGSPPVI PPNATLQFDV ELLSWASVKD ICKDGSIFKK ILAEGEKWEN
201: PKDCDEVFVK YEARLEDGTL ITKSDGIEFT VKEGHFCPAI SKAVKTMKKN EKALLTVKPQ YGFGEQGRPA SRGEAAVPPN AMLQIDLQLV SWKTVTEIGN
301: DKTILKKILQ EGEGYDRPKD CSTVKVKLIG KLDDGTMFVK KGHDGEEPFE FKTDEDQVIE GLDKAVLSMK KGEVAFVTIP PEHAFGSDET KQDLAVVPPN
401: TTVYYDVELV SFDKEKESWE LKDNAEKIEA AAKKKDEGNV WFKMGKYARA SKRYGKALDF IEYESSFNEE EKQLSKPLKV SCKLNKAACK LKLKDYKEAK
501: NLCTEVLEID STNVKALYRR AQAHMHLVDF DLAEVDIKRA LEIDPENRDV KMGYRRLKEK VKEYERRDAK FYGNMINKLS KLEDDEGCGS SQGPSKKPRS
601: LWPLAPFFTT DGSKLWLVLR LLIPVMILVA LCVAYYVQSG VHEIDCVNC
001: MDANFEMPPV GGMNDDDDMD FGDGASFLKV GEEKEIQQGL KKKLLKEGEG YETPENGDEV EVHYTGTLLD GTKFDSSRDR ATPFKFTLGQ GQVIKGWDIG
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLSK E
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLSK E
Arabidopsis Description
ROF1Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:B3H746]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.