CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
extracellular 1
endoplasmic reticulum 2
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, endoplasmic reticulum
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	endoplasmic reticulum

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016512_P002	Maize	cytosol	85.85	76.82
TraesCS2D01G050300.1	Wheat	cytosol	68.21	75.04
KXG25560	Sorghum	cytosol	57.7	74.5
TraesCS2B01G063900.1	Wheat	cytosol	66.53	74.45
Os02t0491400-01	Rice	plasma membrane	70.73	74.05
TraesCS2A01G050600.3	Wheat	cytosol	65.55	72.22
HORVU2Hr1G007980.1	Barley	cytosol, mitochondrion	67.79	71.92
EER88340	Sorghum	cytosol	58.4	70.44
EES07562	Sorghum	cytosol, mitochondrion, plastid	6.3	40.18
EES19645	Sorghum	nucleus	9.52	36.56
EES07974	Sorghum	cytosol	14.15	27.45
EER94808	Sorghum	cytosol	23.25	26.35
OQU80175	Sorghum	mitochondrion	3.22	14.29

Protein Annotations

Gene3D:1.25.40.10	MapMan:18.12.2	Gene3D:3.10.50.40	Gene3D:3.30.1670.20	EntrezGene:8056696	UniProt:A0A1Z5RMG8
ncoils:Coil	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016853
GO:GO:0019538	InterPro:IPR001179	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	EnsemblPlants:OQU84952
ProteinID:OQU84952	ProteinID:OQU84952.1	PFAM:PF00254	PFAM:PF00515	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom
PFscan:PS50005	PFscan:PS50059	PFscan:PS50293	PANTHER:PTHR10516	PANTHER:PTHR10516:SF338	SMART:SM00028
EnsemblPlantsGene:SORBI_3004G147800	SUPFAM:SSF48452	SUPFAM:SSF54534	unigene:Sbi.21043	TMHMM:TMhelix	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1	InterPro:TPR_repeat	UniParc:UPI000B8BAACE	SEG:seg	:

Description

hypothetical protein

Coordinates

chr4:-:46382491..46389240

Molecular Weight (calculated)

78963.5 Da

IEP (calculated)

6.035

GRAVY (calculated)

-0.566

Length

714 amino acids

Sequence
(BLAST)

001: MEDDYDFPAA GGYDPMGMMG MGMGMGGLGL GGAMGMGMGG YGLGGPMGMG MGGYGLGGEE DDEAMKDLHA GAGAGEGAGD NPPAELKVGE EREIGKEGLK
101: KKLVKEGEGW GRPGDGDEVE VHYTGTLMDG TKFDSSRDRD SPFKFKLGQG QVIKGWDLGI KTMKKGENAV FTIPPELAYG EDGSPPVIPP NATLQFDVEL
201: LSWVCIKDIC KDGGILKKVL AEGDKWENPR DPDEVFVKYE ARLEDGTVVS KSDGVEFTVR DGVFCPAISK AVKTMKKNEK AHLTVMPQYG FGVKGRPTSG
301: EEASVPPNAT LHIDLQVVSW RTVTELGNDK KVLKKILKEG EGYDRPNDCA IVRVKLIGKL EDGTLFVKKG HDGEEPFEFK TDEDQVIEGL DKAVLSMKKG
401: EVALVIIPPH HAFGTNETNQ DLAMVPPNSS VYYEMELVSF DKEKDSWDLK NIAEKIEAAA KKKEEGNVWF KVGKYARASK RYEKALSFIE YDSSFSEEEK
501: QLSKPLKISC KLNNAACKLR LNDYKEAKEL CTEVLESDST NVKALYRRAQ AHMHLVDLDL AEADIKKALE IDPDNRDVKM GYRRLKEKVK EYKRRDAKLY
601: GNMISKLSKL EDTEDNDQMS QALNKKHGLL WPLTEMLRRF FTTDGSKGST LWLVLRLLIP MGPKAFWALF SHPDRGRPTL HGWWAPVAQR YKGRWGAGAR
701: GTRFTAQPFP PPTS

Best Arabidopsis Sequence Match ( AT3G25230.1 )
(BLAST)

001: MDANFEMPPV GGMNDDDDMD FGDGASFLKV GEEKEIQQGL KKKLLKEGEG YETPENGDEV EVHYTGTLLD GTKFDSSRDR ATPFKFTLGQ GQVIKGWDIG
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLSK E

Arabidopsis Description

ROF1Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:B3H746]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.