CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plasma membrane 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d004243_P001	Maize	cytosol	89.19	89.8
Os04t0352400-01	Rice	mitochondrion, plasma membrane	83.45	84.44
TraesCS2D01G276000.2	Wheat	cytosol	81.08	81.77
TraesCS2A01G277100.1	Wheat	cytosol	79.9	81.27
HORVU2Hr1G067750.9	Barley	cytosol	81.25	81.25
TraesCS2B01G294500.1	Wheat	cytosol	80.07	80.75
KXG25560	Sorghum	cytosol	73.48	78.66
OQU84952	Sorghum	cytosol	70.44	58.4
EES07562	Sorghum	cytosol, mitochondrion, plastid	7.77	41.07
EES19645	Sorghum	nucleus	10.64	33.87
EES07974	Sorghum	cytosol	16.55	26.63
EER94808	Sorghum	cytosol	28.21	26.51
OQU80175	Sorghum	mitochondrion	4.22	15.53

Protein Annotations

Gene3D:1.25.40.10	MapMan:18.12.2	Gene3D:3.10.50.40	Gene3D:3.30.1670.20	EntrezGene:8072909	UniProt:C5Z288
ncoils:Coil	EnsemblPlants:EER88340	ProteinID:EER88340	ProteinID:EER88340.1	GO:GO:0000413	GO:GO:0003674
GO:GO:0003755	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005528	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	GO:GO:0061077	InterPro:IPR001179	InterPro:IPR011990
InterPro:IPR013026	InterPro:IPR019734	PFAM:PF00254	PFAM:PF13181	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom
PFscan:PS50005	PFscan:PS50059	PFscan:PS50293	PANTHER:PTHR10516	PANTHER:PTHR10516:SF338	SMART:SM00028
EnsemblPlantsGene:SORBI_3010G134700	SUPFAM:SSF48452	SUPFAM:SSF54534	unigene:Sbi.1621	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
InterPro:TPR_repeat	UniParc:UPI0001A88FB1	RefSeq:XP_002436973.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr10:+:19878437..19882014

Molecular Weight (calculated)

66417.2 Da

IEP (calculated)

4.950

GRAVY (calculated)

-0.605

Length

592 amino acids

Sequence
(BLAST)

001: MADDAFDLPI SGEGEEEVMG GLEEEEEAIK DLDAGVDADE DYFPPTMKAG EEREIGKEGL KKKLVKEGQG WDRPETGDEV EVHYTGTLLD GTKFDSSRDR
101: GTPFKFKLGQ GQVIKGWDLG IKTMKKGENA IFTIPPGLAY GETGSSCTIP PNATLQFDVE LLSWASVKDI CKDGGIFKKI LVEGEKWENP KDLDEVFVKY
201: EARLEDGTVV SKSDGVEFAV KDGYFCPALA KAVKTMKKGE KVLLTVKPQY GFGEQGKQAS GDEAAVPPNA MLHIDLELVT WKTVTLIGDR KRILKKVLKE
301: GEGYERPNDG AVVGVRLIGK LEDGTVFVRK GHDGEEPFEF KTDEEQVIEG LDITVVNMKK GEVALVRVPP EHAFGSVETK QDLAIVPPNS TVFYEVELVS
401: FEKEKESWDL KTNTEKIEAA AKKKDEGNVW FKMGKYAKAS KRYEKAAKYI EYDNSFSEDE KKQSKSLKIS SKLNNAACKL KLKEYREAEK LCTKVLDLES
501: TSVKALYRRA QAYIELVDLE LAELDVKKAL EIDPDNRDVK LVYKTLKERM REYNRRDAKF YGNMFAKWRK LEQLQKVPGK QELQPMAIDS AA

Best Arabidopsis Sequence Match ( AT5G48570.1 )
(BLAST)

001: MEDDFDTQNQ FPEEEPEEMD MDLPDNDEAD SAPYLKIGEE MEIGKSGLKK KLVKECEKWD TPENGDEVEV HYTGTLLDGT KFDSSRDRGT PFKFTLGQGH
101: VIKGWDLGIK TMKKGENAIF TIPPELAYGE TGSPPTIPPN ATLQFDVELI AWRSVKDICG DGGVSKKIIV EGEKWEKPKD LDEVYVKYEA RLEDGTIVGK
201: SDGVEFTVKE GHFCPALSKA VKTMKRGEKV LLTVKPQYGF GEFGRPASDG LQAAIPPNAT LQIDLELVSW KTVVEVTDDR KVIKKILKEG EGYERPNEGA
301: IVKLKLIGKL QDGTTVFVKK GHEEDEEPFE FKIDEEQVIE GLEKAVMGMK KGEVALITIS PEYAFGSSES KQELAVIPPN STVYYEVELV SFIKEKESWD
401: MNTQERIEAA GKKKEEGNVL FKAGKYARAS KRYERGVKYI EYDSTFDEEE KKKSKDLKIA CNLNDAACKL KLKDYKEAAK LSTKVLEMDS RNVKAMYRRA
501: HAYLETADLD LAELDIKKAL EIDPDNKEVK IEYKKLKEKV KEYNKKDAKF YSNMLSKMLE PHKGTQKEAQ AMSIDTKA

Arabidopsis Description

FKBP65Peptidyl-prolyl cis-trans isomerase FKBP65 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.