Factsheet for TraesCS7B01G153100.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	cytosol, peroxisome
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	peroxisome
YLoc:	cytosol

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G257300.1	Wheat	cytosol	98.75	98.75
TraesCS7A01G257100.1	Wheat	cytosol	98.39	98.39
HORVU7Hr1G053170.6	Barley	cytosol	97.32	96.11
KXG25560	Sorghum	cytosol	88.37	89.33
Os08t0525600-01	Rice	cytosol, extracellular, plasma membrane, plastid	88.37	85.17
Zm00001d031569_P001	Maize	plasma membrane	88.19	85.0
GSMUA_Achr7P22780_001	Banana	cytosol	79.07	80.51
PGSC0003DMT400051809	Potato	cytosol	80.5	78.4
GSMUA_Achr10P...	Banana	cytosol	78.53	78.11
Solyc06g083190.2.1	Tomato	extracellular	79.96	77.87
Solyc09g057660.2.1	Tomato	cytosol	76.74	77.02
GSMUA_AchrUn_...	Banana	cytosol	78.71	75.73
CDY52281	Canola	cytosol	75.13	75.27
AT3G25230.2	Thale cress	cytosol	75.67	75.27
CDY15104	Canola	cytosol	37.21	75.09
CDY15103	Canola	cytosol	74.96	75.09
Bra013224.1-P	Field mustard	cytosol	74.96	73.9
CDX85348	Canola	cytosol	74.42	72.98
CDX86295	Canola	cytosol	74.78	72.95
Bra037477.1-P	Field mustard	cytosol	74.24	72.43
TraesCS2B01G294500.1	Wheat	cytosol	75.67	72.06
VIT_00s0260g00070.t01	Wine grape	cytosol	13.06	71.57
AT5G48570.1	Thale cress	cytosol	73.88	71.45
TraesCS2B01G063900.1	Wheat	cytosol	69.59	60.97
PGSC0003DMT400053619	Potato	cytosol	76.92	56.88
CDY00831	Canola	cytosol	19.32	56.84
CDY00829	Canola	cytosol	25.58	40.06
TraesCS1B01G292400.1	Wheat	nucleus	12.16	33.66
TraesCS1B01G192700.1	Wheat	cytosol, mitochondrion	29.34	27.02
TraesCS5B01G131200.1	Wheat	cytosol	16.99	25.68
TraesCS6B01G344100.1	Wheat	plastid	8.94	25.64

Protein Annotations

Gene3D:1.25.40.10	MapMan:18.12.2	Gene3D:3.10.50.40	Gene3D:3.30.1670.20	ncoils:Coil	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	InterPro:IPR001179	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734
PFAM:PF00254	PFAM:PF00515	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50005	PFscan:PS50059
PFscan:PS50293	PANTHER:PTHR10516	PANTHER:PTHR10516:SF386	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF54534
InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1	InterPro:TPR_repeat	EnsemblPlantsGene:TraesCS7B01G153100	EnsemblPlants:TraesCS7B01G153100.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr7B:+:203740682..203744918

Molecular Weight (calculated)

62020.8 Da

IEP (calculated)

5.090

GRAVY (calculated)

-0.651

Length

559 amino acids

Sequence
(BLAST)

001: MDDDFDIPAG DDMMMGDGMG DFGGAEGPGM KVGEEKEIGK QGLKKKLLKE GEGWDTPEVG DEVEVHYTGT LLDGKKFDSS RDRDDTFKFK LGQGQVIKGW
101: DQGIKTMKKG ENALFTIPPE LAYGESGSPP TIPANATLQF DVELLSWTSV RDIAKDGGIF KKILKEGDKW ENPKDPDEVF VKYEARLEDG TVVSKSEGVE
201: FTVKDGHLCP ALAKAVKTMK KGEKVLLAVK PQYGFGEMGR PAAGEGGAVP PNASLVIDLE LVSWKTVTEI GDDKKILKKV LKEGEGYERP NEGAVVTVKI
301: TGKLQDGTVF LKKGHDEQEP FEFKTDEEAV IEGLDRAVLN MKKGEVALVT IPPEYAYGST ESKQDAIVPP NSTVIYEVEL VSFVKDKESW DLNNSEKIEA
401: AGTKKEEGNA LFKSGKYARA SKRYEKAAKF IEYDTSFSED EKKQSKQLKI TCNLNNAACK LKLKDYKQAE KLCTKVLELD SRNVKALYRR AQAYTQLADL
501: ELAEVDIKKA LEIDPENRDV KLTYKTLKEK IKEINKKDAK FYSNMFSKMT KPSAEESKA

Best Arabidopsis Sequence Match ( AT3G25230.1 )
(BLAST)

001: MDANFEMPPV GGMNDDDDMD FGDGASFLKV GEEKEIQQGL KKKLLKEGEG YETPENGDEV EVHYTGTLLD GTKFDSSRDR ATPFKFTLGQ GQVIKGWDIG
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLSK E

Arabidopsis Description

ROF1Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:B3H746]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.