Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52281 | Canola | cytosol | 89.5 | 90.14 |
| CDY15103 | Canola | cytosol | 89.32 | 89.96 |
| CDY15104 | Canola | cytosol | 44.13 | 89.53 |
| Bra013224.1-P | Field mustard | cytosol | 88.97 | 88.18 |
| Solyc09g057660.2.1 | Tomato | cytosol | 77.94 | 78.64 |
| Solyc06g083190.2.1 | Tomato | extracellular | 80.25 | 78.57 |
| PGSC0003DMT400051809 | Potato | cytosol | 79.89 | 78.22 |
| KXG25560 | Sorghum | cytosol | 76.87 | 78.12 |
| GSMUA_Achr7P22780_001 | Banana | cytosol | 74.38 | 76.14 |
| TraesCS7D01G257300.1 | Wheat | cytosol | 75.44 | 75.85 |
| TraesCS7A01G257100.1 | Wheat | cytosol | 75.44 | 75.85 |
| TraesCS7B01G153100.1 | Wheat | golgi | 75.27 | 75.67 |
| Os08t0525600-01 | Rice | cytosol, extracellular, plasma membrane, plastid | 76.87 | 74.48 |
| HORVU7Hr1G053170.6 | Barley | cytosol | 74.73 | 74.2 |
| Zm00001d031569_P001 | Maize | plasma membrane | 76.33 | 73.97 |
| GSMUA_Achr10P... | Banana | cytosol | 73.13 | 73.13 |
| GSMUA_AchrUn_... | Banana | cytosol | 75.09 | 72.63 |
| AT5G48570.1 | Thale cress | cytosol | 74.38 | 72.32 |
| VIT_00s0260g00070.t01 | Wine grape | cytosol | 12.99 | 71.57 |
| CDY00831 | Canola | cytosol | 23.49 | 69.47 |
| PGSC0003DMT400053619 | Potato | cytosol | 78.29 | 58.2 |
| AT1G58450.1 | Thale cress | cytosol | 14.59 | 50.0 |
| CDY00829 | Canola | cytosol | 29.0 | 45.66 |
| AT5G64350.1 | Thale cress | cytosol, mitochondrion, plastid | 7.47 | 37.5 |
| AT3G55520.1 | Thale cress | nucleus | 11.57 | 34.21 |
| AT3G21640.1 | Thale cress | cytosol | 17.44 | 26.85 |
| AT3G54010.1 | Thale cress | cytosol | 29.72 | 26.3 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:18.12.2 | Gene3D:3.10.50.40 | Gene3D:3.30.1670.20 | EntrezGene:822117 | ProteinID:AEE76997.1 |
| ArrayExpress:AT3G25230 | EnsemblPlantsGene:AT3G25230 | RefSeq:AT3G25230 | TAIR:AT3G25230 | RefSeq:AT3G25230-TAIR-G | EnsemblPlants:AT3G25230.2 |
| TAIR:AT3G25230.2 | UniProt:B3H746 | ncoils:Coil | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006464 | GO:GO:0006950 | GO:GO:0006970 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008289 | GO:GO:0009408 | GO:GO:0009611 |
| GO:GO:0009628 | GO:GO:0009719 | GO:GO:0009735 | GO:GO:0009791 | GO:GO:0009845 | GO:GO:0009987 |
| GO:GO:0016853 | GO:GO:0019538 | GO:GO:0032266 | GO:GO:0046686 | GO:GO:0071944 | GO:GO:0080025 |
| InterPro:IPR001179 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | RefSeq:NP_001118695.1 | PFAM:PF00254 |
| PFAM:PF00515 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001170 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 |
| PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 |
| PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 |
| InterPro:PPIase_FKBP | InterPro:PPIase_FKBP_dom | PFscan:PS50005 | PFscan:PS50059 | PFscan:PS50293 | PANTHER:PTHR10516 |
| PANTHER:PTHR10516:SF386 | Symbol:ROF1 | SMART:SM00028 | SUPFAM:SSF48452 | SUPFAM:SSF54534 | InterPro:TPR-contain_dom |
| InterPro:TPR-like_helical_dom_sf | InterPro:TPR_1 | InterPro:TPR_repeat | UniParc:UPI00017392BB | SEG:seg | : |
Description
ROF1Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:B3H746]
Coordinates
chr3:+:9188181..9191419
Molecular Weight (calculated)
62914.9 Da
IEP (calculated)
5.228
GRAVY (calculated)
-0.663
Length
562 amino acids
Sequence
(BLAST)
(BLAST)
001: MDANFEMPPV GGMNDDDDMD FGDGASFLKV GEEKEIQQGL KKKLLKEGEG YETPENGDEV EVHYTGTLLD GTKFDSSRDR ATPFKFTLGQ GQVIKGWDIG
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLRI IKRWRGNEHL RS
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLRI IKRWRGNEHL RS
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.