CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15103	Canola	cytosol	98.75	98.75
CDY15104	Canola	cytosol	47.67	96.03
AT3G25230.2	Thale cress	cytosol	90.14	89.5
KXG25560	Sorghum	cytosol	78.85	79.57
Solyc09g057660.2.1	Tomato	cytosol	78.67	78.82
PGSC0003DMT400051809	Potato	cytosol	80.47	78.22
Solyc06g083190.2.1	Tomato	extracellular	80.29	78.05
GSMUA_Achr7P22780_001	Banana	cytosol	76.7	77.96
CDX86295	Canola	cytosol	78.67	76.61
CDX85348	Canola	cytosol	77.78	76.14
Zm00001d031569_P001	Maize	plasma membrane	78.32	75.34
TraesCS7D01G257300.1	Wheat	cytosol	75.45	75.31
TraesCS7A01G257100.1	Wheat	cytosol	75.45	75.31
TraesCS7B01G153100.1	Wheat	golgi	75.27	75.13
Os08t0525600-01	Rice	cytosol, extracellular, plasma membrane, plastid	77.96	75.0
GSMUA_Achr10P...	Banana	cytosol	75.27	74.73
HORVU7Hr1G053170.6	Barley	cytosol	75.09	74.03
GSMUA_AchrUn_...	Banana	cytosol	77.06	74.01
VIT_00s0260g00070.t01	Wine grape	cytosol	13.44	73.53
CDY00831	Canola	cytosol	23.48	68.95
PGSC0003DMT400053619	Potato	cytosol	78.67	58.07
CDY00829	Canola	cytosol	29.75	46.5
CDY46798	Canola	cytosol	5.56	41.89
CDY15096	Canola	cytosol	52.87	41.84
CDY58272	Canola	cytosol, mitochondrion, plastid	7.71	38.39
CDX84517	Canola	cytosol, mitochondrion, plastid	7.53	37.5
CDY34049	Canola	cytosol	6.45	35.64
CDY40236	Canola	nucleus	11.83	34.74
CDY41214	Canola	nucleus	11.65	34.21
CDX81222	Canola	cytosol, mitochondrion, plastid	6.81	33.93
CDY18714	Canola	endoplasmic reticulum, extracellular	7.53	32.56
CDY64639	Canola	endoplasmic reticulum, extracellular	12.9	26.87
CDX73664	Canola	cytosol	17.74	26.54
CDY31323	Canola	extracellular	6.27	26.52
CDX78057	Canola	cytosol	16.67	26.27
CDX76177	Canola	cytosol	29.57	26.07
CDY07563	Canola	cytosol	29.93	26.01
CDY13167	Canola	cytosol	29.75	25.86
CDY29061	Canola	cytosol	16.49	25.77
CDX90622	Canola	cytosol	18.1	25.57
CDX67584	Canola	cytosol	29.03	24.96
CDY02979	Canola	mitochondrion	3.76	17.8

Protein Annotations

Gene3D:1.25.40.10	MapMan:18.12.2	Gene3D:3.10.50.40	Gene3D:3.30.1670.20	GO:A0A078IQV6	UniProt:A0A078IQV6
EnsemblPlants:CDY52281	ProteinID:CDY52281	ProteinID:CDY52281.1	ncoils:Coil	GO:GO:0000413	GO:GO:0003674
GO:GO:0003755	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	EnsemblPlantsGene:GSBRNA2T00006688001	InterPro:IPR001179
InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	PFAM:PF00254	PFAM:PF00515	InterPro:PPIase_FKBP
InterPro:PPIase_FKBP_dom	PFscan:PS50005	PFscan:PS50059	PFscan:PS50293	PANTHER:PTHR10516	PANTHER:PTHR10516:SF386
SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF54534	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1
InterPro:TPR_repeat	UniParc:UPI0004EE9303	SEG:seg	:	:	:

Description

BnaA03g57740DPeptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A078IQV6]

Coordinates

chrLK033075:+:19307..22407

Molecular Weight (calculated)

62207.1 Da

IEP (calculated)

4.885

GRAVY (calculated)

-0.586

Length

558 amino acids

Sequence
(BLAST)

001: MDEDFEMPPV GGMNGDDEMD FGDDASFLKV GEEKEIQQGL KKKLLKEGEG FETPENGDEV EVHYTGTLLD GTKFDSSRDR GTPFKFTLGQ GQVIKGWDIG
101: IKTMKKGENA VFTIPSELAY GESGSPPTIP ANATLQFDVE LLSWSSVKDI CKDGGVFKKI VAAGEKWEMP KDLDEVLVKY VAKLEDGTVV GKSDGVEFTV
201: KDGYFCPALA KAVKTMKKAE KVLLTVKPQY GFGEKGKPAS GGEAAVPPNA TLEIELELVS WKTVSEVTDD NKVIKKILKE GEGYERPNEG AVVKVKLIGK
301: LGDGTVFLKK GHGEGEEPFE FKTDEEQVID GLDKAVLKMK KGEVALVTID PEYAFGSTES KQELAVVPPN STLYYEVDLV SFDKERESWD MNTEEKIEAA
401: GKKKEEGNAK FKAGKYALAS KRYEKAVKYI EYDSSFSEEE KKQAKALKVA CNLNDAACKL KLKEYRQAEK LCTKVLELES TNVKALYRRA QAYMELADLD
501: LAEFDVKKAL EVDPDNREVK VEQRRLKEKM KEFNKKEAKF YGNMFAKLSN IFVDFKRN

Best Arabidopsis Sequence Match ( AT3G25230.1 )
(BLAST)

001: MDANFEMPPV GGMNDDDDMD FGDGASFLKV GEEKEIQQGL KKKLLKEGEG YETPENGDEV EVHYTGTLLD GTKFDSSRDR ATPFKFTLGQ GQVIKGWDIG
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLSK E

Arabidopsis Description

ROF1Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:B3H746]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.