Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY15104 | Canola | cytosol | 31.91 | 81.23 |
| CDY52281 | Canola | cytosol | 41.84 | 52.87 |
| CDY15103 | Canola | cytosol | 41.56 | 52.51 |
| CDX86295 | Canola | cytosol | 35.6 | 43.8 |
| CDX85348 | Canola | cytosol | 35.32 | 43.68 |
| CDY00829 | Canola | cytosol | 21.84 | 43.14 |
| CDY46798 | Canola | cytosol | 4.26 | 40.54 |
| CDY58272 | Canola | cytosol, mitochondrion, plastid | 5.82 | 36.61 |
| CDX84517 | Canola | cytosol, mitochondrion, plastid | 5.82 | 36.61 |
| CDX81222 | Canola | cytosol, mitochondrion, plastid | 5.39 | 33.93 |
| CDY18714 | Canola | endoplasmic reticulum, extracellular | 5.82 | 31.78 |
| CDY40236 | Canola | nucleus | 7.8 | 28.95 |
| CDY41214 | Canola | nucleus | 7.66 | 28.42 |
| CDY31323 | Canola | extracellular | 4.82 | 25.76 |
| CDY00831 | Canola | cytosol | 5.39 | 20.0 |
| CDY34049 | Canola | cytosol | 2.55 | 17.82 |
| CDY02979 | Canola | mitochondrion | 2.98 | 17.8 |
| CDX73664 | Canola | cytosol | 9.36 | 17.69 |
| CDX76177 | Canola | cytosol | 15.89 | 17.69 |
| CDY13167 | Canola | cytosol | 15.74 | 17.29 |
| CDY07563 | Canola | cytosol | 15.74 | 17.29 |
| CDX90622 | Canola | cytosol | 9.65 | 17.22 |
| CDX78057 | Canola | cytosol | 8.51 | 16.95 |
| CDY29061 | Canola | cytosol | 8.51 | 16.81 |
| CDX67584 | Canola | cytosol | 15.46 | 16.8 |
| CDY64639 | Canola | endoplasmic reticulum, extracellular | 5.53 | 14.55 |
Protein Annotations
| MapMan:18.12.2 | Gene3D:3.10.50.40 | Gene3D:3.30.1670.20 | GO:A0A078FPT3 | UniProt:A0A078FPT3 | EnsemblPlants:CDY15096 |
| ProteinID:CDY15096 | ProteinID:CDY15096.1 | InterPro:ENT_dom | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 |
| GO:GO:0003824 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016853 |
| GO:GO:0019538 | EnsemblPlantsGene:GSBRNA2T00085247001 | InterPro:IPR001179 | InterPro:IPR005491 | PFAM:PF00254 | PFAM:PF03735 |
| InterPro:PPIase_FKBP | InterPro:PPIase_FKBP_dom | PFscan:PS50059 | PANTHER:PTHR10516 | PANTHER:PTHR10516:SF386 | SUPFAM:SSF54534 |
| UniParc:UPI0004EF07C9 | SEG:seg | : | : | : | : |
Description
BnaC03g44570DPeptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A078FPT3]
Coordinates
chrLK032051:+:553006..559108
Molecular Weight (calculated)
78920.4 Da
IEP (calculated)
5.951
GRAVY (calculated)
-0.572
Length
705 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHTLGVRIV TIELTRLDQH KDFEMPPVGG MNDDDEMDFG DDASFLKPGE EKEIQQGLKK KLVKEGEGFE TPENGDEVEV HYTGTLLDGT KFDSSRDRGT
101: PFKFTLGQGQ AIKGWDISIK TMKKGENAVF TIPSELAYGE SGSPPTIPAN ATLQFDVELL SWSSVKDICK DGGFLLSMRL SLRMVRLLEN LMVLSSLKDG
201: YFCPALSKAV KTMKKAEKVL LTVKPQYGFG EKGKPAFGGE GALPPNATLE IELELISWKT VSEVTDGNKV IKKILKQGEG CERPNDGAEL LSWSSVKDIC
301: KDGGVFKKIV AAGEKWEMPK DLDEVLVKYE AKLEDGTVVG KSDGVEFTVK DGYFCPAFAK AVKTMKKAEK ILLTVKPQYG FGEKGKPASG GETAVPPNAT
401: LEIELELLSW KTVPEVNDDN KVIKDLDEVL GDYQEREVYL AVYSVFQKYG TSSEPQVKQI LVDLRSELGI SEDVSSKLEN EKKPKNEDTD PNPLYDLMSA
501: LVEEKTSETS EERERKKRSE QVYKVLMAAV KRCTKKDAEQ AYFNTLNVMS SKCTPLTKKS EDILINLSKE WKIEKDTHNK FLVRIKRAKS FCPLSKSSQA
601: QAKKNACSIC KRQDFFSRRD LAKHERTCRE IEKKQMCQDV FDRVVRKPRT PRVVVARPGK EKESKDVPSC QVSPTDDCCI VERNHDPVQD NIWLQGDPGF
701: PFQET
101: PFKFTLGQGQ AIKGWDISIK TMKKGENAVF TIPSELAYGE SGSPPTIPAN ATLQFDVELL SWSSVKDICK DGGFLLSMRL SLRMVRLLEN LMVLSSLKDG
201: YFCPALSKAV KTMKKAEKVL LTVKPQYGFG EKGKPAFGGE GALPPNATLE IELELISWKT VSEVTDGNKV IKKILKQGEG CERPNDGAEL LSWSSVKDIC
301: KDGGVFKKIV AAGEKWEMPK DLDEVLVKYE AKLEDGTVVG KSDGVEFTVK DGYFCPAFAK AVKTMKKAEK ILLTVKPQYG FGEKGKPASG GETAVPPNAT
401: LEIELELLSW KTVPEVNDDN KVIKDLDEVL GDYQEREVYL AVYSVFQKYG TSSEPQVKQI LVDLRSELGI SEDVSSKLEN EKKPKNEDTD PNPLYDLMSA
501: LVEEKTSETS EERERKKRSE QVYKVLMAAV KRCTKKDAEQ AYFNTLNVMS SKCTPLTKKS EDILINLSKE WKIEKDTHNK FLVRIKRAKS FCPLSKSSQA
601: QAKKNACSIC KRQDFFSRRD LAKHERTCRE IEKKQMCQDV FDRVVRKPRT PRVVVARPGK EKESKDVPSC QVSPTDDCCI VERNHDPVQD NIWLQGDPGF
701: PFQET
001: MDANFEMPPV GGMNDDDDMD FGDGASFLKV GEEKEIQQGL KKKLLKEGEG YETPENGDEV EVHYTGTLLD GTKFDSSRDR ATPFKFTLGQ GQVIKGWDIG
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLSK E
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLSK E
Arabidopsis Description
ROF1Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:B3H746]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.