CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
peroxisome 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, peroxisome
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	peroxisome
WoLF PSORT:	peroxisome
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86295	Canola	cytosol	95.61	95.11
AT5G48570.1	Thale cress	cytosol	88.42	87.2
CDY52281	Canola	cytosol	76.14	77.78
CDY15104	Canola	cytosol	37.54	77.26
CDY15103	Canola	cytosol	75.61	77.24
KXG25560	Sorghum	cytosol	74.39	76.67
PGSC0003DMT400051809	Potato	cytosol	77.02	76.48
GSMUA_Achr7P22780_001	Banana	cytosol	73.51	76.32
Solyc06g083190.2.1	Tomato	extracellular	76.84	76.31
Solyc09g057660.2.1	Tomato	cytosol	74.21	75.94
TraesCS7D01G257300.1	Wheat	cytosol	73.51	74.96
TraesCS7A01G257100.1	Wheat	cytosol	73.16	74.6
GSMUA_Achr10P...	Banana	cytosol	73.51	74.56
TraesCS7B01G153100.1	Wheat	golgi	72.98	74.42
HORVU7Hr1G053170.6	Barley	cytosol	72.98	73.5
GSMUA_AchrUn_...	Banana	cytosol	74.74	73.32
Zm00001d031569_P001	Maize	plasma membrane	73.68	72.41
Os08t0525600-01	Rice	cytosol, extracellular, plasma membrane, plastid	73.16	71.9
CDY00831	Canola	cytosol	18.77	56.32
PGSC0003DMT400053619	Potato	cytosol	74.56	56.22
CDY46798	Canola	cytosol	5.61	43.24
CDY00829	Canola	cytosol	24.74	39.5
CDY58272	Canola	cytosol, mitochondrion, plastid	7.72	39.29
CDX84517	Canola	cytosol, mitochondrion, plastid	7.54	38.39
CDY40236	Canola	nucleus	12.63	37.89
CDY41214	Canola	nucleus	12.46	37.37
CDY15096	Canola	cytosol	43.68	35.32
CDX81222	Canola	cytosol, mitochondrion, plastid	6.84	34.82
CDY18714	Canola	endoplasmic reticulum, extracellular	7.54	33.33
CDY34049	Canola	cytosol	5.79	32.67
CDY31323	Canola	extracellular	6.32	27.27
CDY29061	Canola	cytosol	16.49	26.33
CDX78057	Canola	cytosol	16.32	26.27
CDX76177	Canola	cytosol	28.95	26.07
CDX73664	Canola	cytosol	17.02	26.01
CDY64639	Canola	endoplasmic reticulum, extracellular	12.11	25.75
CDY13167	Canola	cytosol	28.77	25.55
CDY07563	Canola	cytosol	28.77	25.55
CDX90622	Canola	cytosol	17.54	25.32
CDX67584	Canola	cytosol	28.25	24.81
CDY02979	Canola	mitochondrion	3.68	17.8

Protein Annotations

Gene3D:1.25.40.10	MapMan:18.12.2	Gene3D:3.10.50.40	Gene3D:3.30.1670.20	GO:A0A078DDH5	EnsemblPlants:CDX85348
ProteinID:CDX85348	ProteinID:CDX85348.1	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
EnsemblPlantsGene:GSBRNA2T00143020001	InterPro:IPR001179	InterPro:IPR011990	InterPro:IPR013026	InterPro:IPR019734	PFAM:PF00254
PFAM:PF13181	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50005	PFscan:PS50059	PFscan:PS50293
PANTHER:PTHR10516	PANTHER:PTHR10516:SF386	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF54534	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat	UniParc:UPI0004EF262D	SEG:seg	:	:

Description

BnaC07g26590D

Coordinates

chrLK031841:-:1348200..1350948

Molecular Weight (calculated)

63727.1 Da

IEP (calculated)

4.908

GRAVY (calculated)

-0.640

Length

570 amino acids

Sequence
(BLAST)

001: MADDFDMEIP AEEMDLDLED DAESDPSLKV GEEKEIGKSG LKKKLVKEGE KWDTPESGDE VEVHYTGTLL DGTKFDSSRD RGTPFKFTLG QGQVIKGWDM
101: GIKTMKKGEN AVFTIPPELA YGETGSPPTI PANATLQFDV ELLSWRSVKD ICGDGGLFKK IIAEGEKWEK PKDLDEVYVK YEARLEDGTV VGRSEGVEFT
201: VKDGHFCPAI AKAVKTMKRG EKVLLTVKPQ YGFGETGRPV SDGVQAAIPP NVTLQIDLEL VSWKTMVEVT DDKKVIKKIL KEGEGYERPN EGAVVKLKLI
301: GKLQDGTVFL KKGHGEDEEP FEFKTDEEQV IEGLEKAVMG MKKGEVALIT ISPEYAFGSS ESKQEPAVIP PGSTVCYEAE LVSFIKEKES WDMITQEKIE
401: AAGKKKEEGN TLFKAGNYAR ASKRYERGVK YIEYDSSFDE EDKKKAKALK IACYLNNAAC KLKLKDYKEA AKLSTKVLEM DGSNVKAMYR RAEAYMETAD
501: LDLAELDIKK ALEIDPDNKE LKMEYKKLKE KVKEYNKKDA KFYSNMLAKM LEPHKEARKD AQAMSIDAKA

Best Arabidopsis Sequence Match ( AT5G48570.1 )
(BLAST)

001: MEDDFDTQNQ FPEEEPEEMD MDLPDNDEAD SAPYLKIGEE MEIGKSGLKK KLVKECEKWD TPENGDEVEV HYTGTLLDGT KFDSSRDRGT PFKFTLGQGH
101: VIKGWDLGIK TMKKGENAIF TIPPELAYGE TGSPPTIPPN ATLQFDVELI AWRSVKDICG DGGVSKKIIV EGEKWEKPKD LDEVYVKYEA RLEDGTIVGK
201: SDGVEFTVKE GHFCPALSKA VKTMKRGEKV LLTVKPQYGF GEFGRPASDG LQAAIPPNAT LQIDLELVSW KTVVEVTDDR KVIKKILKEG EGYERPNEGA
301: IVKLKLIGKL QDGTTVFVKK GHEEDEEPFE FKIDEEQVIE GLEKAVMGMK KGEVALITIS PEYAFGSSES KQELAVIPPN STVYYEVELV SFIKEKESWD
401: MNTQERIEAA GKKKEEGNVL FKAGKYARAS KRYERGVKYI EYDSTFDEEE KKKSKDLKIA CNLNDAACKL KLKDYKEAAK LSTKVLEMDS RNVKAMYRRA
501: HAYLETADLD LAELDIKKAL EIDPDNKEVK IEYKKLKEKV KEYNKKDAKF YSNMLSKMLE PHKGTQKEAQ AMSIDTKA

Arabidopsis Description

FKBP65Peptidyl-prolyl cis-trans isomerase FKBP65 [Source:UniProtKB/Swiss-Prot;Acc:Q9FJL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.