Factsheet for Os08t0525600-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, extracellular, cytosol

Predictor Summary:

cytosol 5
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

extracellular: 26072143
plasma membrane: 27800704
plastid: 27992503

msms PMID: 26072143 doi

B Du, Z Wei, Z Wang, X Wang, X Peng, B Du, R Chen, L Zhu, G He

State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China., State Key Laboratory of Hybrid Rice, College of Life Sciences, Wuhan University, Wuhan, 430072, China. Electronic address: gche@whu.edu.cn.

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 27992503 doi

S Xing, X Meng, L Zhou, H Mujahid, C Zhao, Y Zhang, C Wang, Z Peng

Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG25560	Sorghum	cytosol	86.21	90.42
TraesCS7D01G257300.1	Wheat	cytosol	85.86	89.09
TraesCS7A01G257100.1	Wheat	cytosol	85.34	88.55
TraesCS7B01G153100.1	Wheat	golgi	85.17	88.37
HORVU7Hr1G053170.6	Barley	cytosol	84.14	86.22
Zm00001d031569_P001	Maize	plasma membrane	85.17	85.17
GSMUA_Achr7P22780_001	Banana	cytosol	76.72	81.06
CDY15104	Canola	cytosol	37.93	79.42
PGSC0003DMT400051809	Potato	cytosol	77.59	78.4
GSMUA_Achr10P...	Banana	cytosol	75.86	78.29
CDY52281	Canola	cytosol	75.0	77.96
CDY15103	Canola	cytosol	74.83	77.78
Solyc06g083190.2.1	Tomato	extracellular	76.9	77.7
GSMUA_AchrUn_...	Banana	cytosol	77.76	77.62
AT3G25230.2	Thale cress	cytosol	74.48	76.87
Bra013224.1-P	Field mustard	cytosol	75.0	76.72
Solyc09g057660.2.1	Tomato	cytosol	72.93	75.94
CDX86295	Canola	cytosol	73.28	74.17
Os04t0352400-01	Rice	mitochondrion, plasma membrane	74.48	73.85
Bra037477.1-P	Field mustard	cytosol	72.59	73.47
CDX85348	Canola	cytosol	71.9	73.16
AT5G48570.1	Thale cress	cytosol	70.34	70.59
VIT_00s0260g00070.t01	Wine grape	cytosol	12.24	69.61
Os02t0491400-01	Rice	plasma membrane	70.52	59.97
PGSC0003DMT400053619	Potato	cytosol	73.28	56.22
CDY00831	Canola	cytosol	18.28	55.79
Os02t0760300-01	Rice	extracellular	8.79	45.54
CDY00829	Canola	cytosol	25.69	41.74
Os05t0458100-01	Rice	nucleus	11.38	35.48
Os01t0562400-01	Rice	mitochondrion	35.17	35.42
Os01t0844300-01	Rice	nucleus	10.86	34.05
Os01t0563000-04	Rice	plasma membrane	36.38	32.36
Os03t0367000-01	Rice	plasma membrane	30.17	27.69
Os12t0145500-01	Rice	cytosol	16.72	26.22
Os11t0148300-01	Rice	cytosol	16.72	25.87
Os01t0564300-01	Rice	cytosol, plasma membrane	18.28	25.12

Protein Annotations

Gene3D:1.25.40.10	MapMan:18.12.2	Gene3D:3.10.50.40	Gene3D:3.30.1670.20	EntrezGene:4346090	EMBL:AK103172
ProteinID:BAD11570.1	ProteinID:BAF24206.1	ProteinID:BAT06336.1	ncoils:Coil	GO:GO:0000413	GO:GO:0003674
GO:GO:0003755	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005528	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	GO:GO:0061077	InterPro:IPR001179	InterPro:IPR011990
InterPro:IPR013026	InterPro:IPR019734	EnsemblPlantsGene:Os08g0525600	EnsemblPlants:Os08t0525600-01	PFAM:PF00254	PFAM:PF00515
InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50005	PFscan:PS50059	PFscan:PS50293	PANTHER:PTHR10516
PANTHER:PTHR10516:SF386	UniProt:Q7F1F2	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF54534	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	InterPro:TPR_1	InterPro:TPR_repeat	UniParc:UPI000024164E	RefSeq:XP_015650117.1	SEG:seg

Description

FK506 binding protein 62a, FK506 binding protein 64Similar to Peptidylprolyl isomerase; FK506-binding protein. (Os08t0525600-01)

Coordinates

chr8:+:26138531..26143010

Molecular Weight (calculated)

64125.2 Da

IEP (calculated)

4.871

GRAVY (calculated)

-0.628

Length

580 amino acids

Sequence
(BLAST)

001: MDDDFEMPPP GADDDLMMGE DGMGDFGGAD GPPLKVGEEK EIGKQGLRKK LLKEGEGWET PEVGDEVEVH YTGTLLDGKK FDSSRDRGTP FKFKLGQGQV
101: IKGWDLGIKT MKKGENAVFT IPPDLAYGES GSPPTIPASA TLQFDVELLS WTSVKDICQD GGIFKKILKE GEKWENPKDL DEVFVKYEAR LEDGTVISKS
201: EGAEFTVKDG FFCPALAKAV KTMKKAEKVL LTVKPQYGFG ENGRPAAGEE GAVPPNATLL VNLELVSWKT VTEIGDDKKI LKKVLTEGTG YERPNEGAVV
301: KVKITGKLQD GTIFTKKGHD EPEPFEFKTD EEEVIDGIDR AVLNMKNGEV ALVTIPPEYA FGSTESKQDL AVVPPNSTVI YEVELVSFVK DKESWDLNNT
401: EKIETAGAKK EEGNALFKLG KYVRASKRYE KAAKFIEYDS SFSEDEKKQS KQLKVTCNLN NAACKLKLKD YKQAEKLCTK VLELDSQNVK ALYRRAQAYM
501: QLADLELAEV DIKKALEIDP DNRDVKLTYK NLKEKVKEYN KKDAKFYSNM FAKMTKQPAE DGKAGSGAES KQGSEPVTAA

Best Arabidopsis Sequence Match ( AT3G25230.1 )
(BLAST)

001: MDANFEMPPV GGMNDDDDMD FGDGASFLKV GEEKEIQQGL KKKLLKEGEG YETPENGDEV EVHYTGTLLD GTKFDSSRDR ATPFKFTLGQ GQVIKGWDIG
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLSK E

Arabidopsis Description

ROF1Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:B3H746]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.