Factsheet for Os12t0145500-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, vacuole
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os04t0107900-02
Os04t0459000-01
Os04t0620000-01
Os04t0642000-01
Os08t0564300-04

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G21640.1	Os04t0620000-01	AT2G34660.1	15133126
AT3G21640.1	Os08t0564300-04	AT2G36910.1	14517332
AT3G21640.1	Os04t0459000-01	AT3G28860.1	14517332
AT3G21640.1	Os04t0642000-01	AT3G28860.1	14517332
AT3G21640.1	Os04t0107900-02	AT5G52640.1	12410806

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES07974	Sorghum	cytosol	86.49	86.96
Os11t0148300-01	Rice	cytosol	88.11	86.93
Zm00001d004930_P001	Maize	mitochondrion	85.14	84.22
CDY34049	Canola	cytosol	21.89	80.2
VIT_13s0064g00580.t01	Wine grape	cytosol	73.24	74.25
GSMUA_Achr6P12690_001	Banana	cytosol	72.97	72.19
KRH23877	Soybean	cytosol, endoplasmic reticulum, nucleus	70.27	70.27
PGSC0003DMT400017681	Potato	cytosol	69.73	70.11
KRH39924	Soybean	endoplasmic reticulum	69.19	69.19
Solyc01g087470.2.1	Tomato	cytosol	60.0	68.31
CDY29061	Canola	cytosol	65.14	67.51
Bra006895.1-P	Field mustard	cytosol	66.49	67.4
CDX78057	Canola	cytosol	64.32	67.23
AT3G21640.1	Thale cress	cytosol	66.22	67.12
Bra012823.1-P	Field mustard	cytosol	64.32	66.67
CDX73664	Canola	cytosol	66.49	65.95
CDX90622	Canola	cytosol	66.49	62.28
CDY64639	Canola	endoplasmic reticulum, extracellular	44.86	61.94
Os02t0760300-01	Rice	extracellular	7.03	23.21
Os01t0844300-01	Rice	nucleus	9.73	19.46
Os05t0458100-01	Rice	nucleus	9.46	18.82
Os04t0352400-01	Rice	mitochondrion, plasma membrane	27.57	17.44
Os08t0525600-01	Rice	cytosol, extracellular, plasma membrane, plastid	26.22	16.72
Os02t0491400-01	Rice	plasma membrane	26.49	14.37
Os03t0367000-01	Rice	plasma membrane	24.05	14.08
Os01t0562400-01	Rice	mitochondrion	14.86	9.55
Os01t0563000-04	Rice	plasma membrane	15.41	8.74
Os01t0564300-01	Rice	cytosol, plasma membrane	9.46	8.29

Protein Annotations

Gene3D:1.25.40.10	MapMan:18.12.2	Gene3D:3.10.50.40	EntrezGene:4351491	ProteinID:ABA96472.1	EMBL:AK065114
ProteinID:BAF29165.1	ProteinID:BAT15877.1	ProteinID:EEE52762.1	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755
GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	InterPro:IPR001179	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR019734	EnsemblPlantsGene:Os12g0145500	EnsemblPlants:Os12t0145500-01	PFAM:PF00254	PFAM:PF13181	InterPro:PPIase_FKBP
InterPro:PPIase_FKBP_dom	PFscan:PS50005	PFscan:PS50059	PFscan:PS50293	PANTHER:PTHR43811	PANTHER:PTHR43811:SF21
UniProt:Q2QXS0	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF54534	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf
InterPro:TPR_repeat	UniParc:UPI0000681A55	RefSeq:XP_015618620.1	:	:	:

Description

FK506 binding protein 42aPeptidyl-prolyl cis-trans isomerase, FKBP-type domain containing protein. (Os12t0145500-01)

Coordinates

chr12:+:2236066..2239402

Molecular Weight (calculated)

42226.4 Da

IEP (calculated)

5.583

GRAVY (calculated)

-0.581

Length

370 amino acids

Sequence
(BLAST)

001: MAVLEEDPAP VPAADSTSGA SDDEITVEET SFVHTEPPQD GTAPPVVTSD MEVLNDKVKK QVIKEGHGKK PSRFATCFVH YRAWVQGSSH KFEDTWQEQH
101: SIELVLGKEK KEMTGLGIGV SNMRSGERAL LHVNWELGYG KEGSFSFPNV PPMADLVYEV ELIGFDDVKE GKARSDMTVE ERIEAADRRK IEGNEYFKEK
201: KFEEAMQQYE MAIAYMGDDF MFQLFGKYRD MALAVKNPCH LNMAACLIKL KRFDEAIAQC TIVLSEDENN VKALFRRGKA RAELGQTESA REDFLKAKKY
301: SPEDKEIQRE LRSLAEQDKA LYQKQKELYK GLFGPRPEPK PKASNFLVLF WRWLVSLIGY LVKLFKRKDE

Best Arabidopsis Sequence Match ( AT3G21640.1 )
(BLAST)

001: MDESLEHQTQ THDQESEIVT EGSAVVHSEP SQEGNVPPKV DSEAEVLDEK VSKQIIKEGH GSKPSKYSTC FLHYRAWTKN SQHKFEDTWH EQQPIELVLG
101: KEKKELAGLA IGVASMKSGE RALVHVGWEL AYGKEGNFSF PNVPPMADLL YEVEVIGFDE TKEGKARSDM TVEERIGAAD RRKMDGNSLF KEEKLEEAMQ
201: QYEMAIAYMG DDFMFQLYGK YQDMALAVKN PCHLNIAACL IKLKRYDEAI GHCNIVLTEE EKNPKALFRR GKAKAELGQM DSARDDFRKA QKYAPDDKAI
301: RRELRALAEQ EKALYQKQKE MYKGIFKGKD EGGAKSKSLF WLIVLWQWFV SLFSRIFRRH RVKAD

Arabidopsis Description

FKBP42Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178V6X3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.