Factsheet for Os01t0564300-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, cytosol

Predictor Summary:

cytosol 4
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plasma membrane
Any Predictor:	cytosol, mitochondrion, vacuole
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	vacuole
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os02t0760300-01	Rice	extracellular	8.29	31.25
Os01t0563000-04	Rice	plasma membrane	47.39	30.67
Os01t0562400-01	Rice	mitochondrion	37.44	27.43
Os05t0458100-01	Rice	nucleus	9.48	21.51
Os01t0844300-01	Rice	nucleus	9.24	21.08
KRH46622	Soybean	cytosol, nucleus	24.41	18.93
KRG99620	Soybean	cytosol	24.41	18.93
Os04t0352400-01	Rice	mitochondrion, plasma membrane	26.07	18.8
KRH07424	Soybean	cytosol	25.12	18.47
Os08t0525600-01	Rice	cytosol, extracellular, plasma membrane, plastid	25.12	18.28
PGSC0003DMT400080935	Potato	cytosol	25.12	18.28
Solyc09g092690.2.1	Tomato	cytosol	25.12	18.24
KRH66151	Soybean	nucleus	25.12	18.21
Os02t0491400-01	Rice	plasma membrane	25.59	15.84
Os03t0367000-01	Rice	plasma membrane	16.35	10.92
Os11t0148300-01	Rice	cytosol	8.53	9.6
Os12t0145500-01	Rice	cytosol	8.29	9.46
VIT_00s0958g00020.t01	Wine grape	cytosol, peroxisome	6.16	7.6

Protein Annotations

MapMan:18.12.2	Gene3D:3.10.50.40	EntrezGene:4327925	EMBL:AK064825	ProteinID:BAD45166.1	ProteinID:BAF05269.1
ProteinID:BAS72740.1	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005488
GO:GO:0005528	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	GO:GO:0061077
InterPro:IPR001179	EnsemblPlantsGene:Os01g0564300	EnsemblPlants:Os01t0564300-01	PFAM:PF00254	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom
PFscan:PS50059	PANTHER:PTHR10516	PANTHER:PTHR10516:SF338	UniProt:Q656V1	SUPFAM:SSF54534	UniParc:UPI000043A1ED
RefSeq:XP_015621254.1	SEG:seg	:	:	:	:

Description

FK506 binding protein 46Peptidyl-prolyl cis-trans isomerase, FKBP-type domain containing protein. (Os01t0564300-01)

Coordinates

chr1:+:21525509..21549819

Molecular Weight (calculated)

45616.0 Da

IEP (calculated)

4.988

GRAVY (calculated)

-0.264

Length

422 amino acids

Sequence
(BLAST)

001: MPIPVDLGEP DNRRFFVWVE DNILTILPPD ADDHEYSGFN MWTVQKPSAG STAINLLFPG GATAAELMYA VPGASKCSKP EDDDAVYCVE AQVHFIGEQL
101: DGTEFVSTRE NGVPQRFILG QENVMHGLSL VVSAMRPGER AIFTIPPKLA ITKSGSPASI PSSIPPEQTL RFEIELISLF AITDILENGS ILKKIIKRPL
201: PDKSPSNHAD TVIVNYNACL EDGNSVSKSE RLELNLASRT GFFCPALKYA VKTMREGEEA IFIVKPRYAF GAQGRDSTGD QAAVPPDATL YLYVQLAERK
301: TAKQNEAEEK GPFIDGPNEA KTTARALPKR RPVKPGFSLP VVQNDRPTYP GHVLFVPHVV EEEEADAGQA ASTTTSGLAT PPTTAADVGT SAATNSSAAQ
401: GSGIVKTETG FLFKRFRPWP AN

Best Arabidopsis Sequence Match ( AT3G25230.1 )
(BLAST)

001: MDANFEMPPV GGMNDDDDMD FGDGASFLKV GEEKEIQQGL KKKLLKEGEG YETPENGDEV EVHYTGTLLD GTKFDSSRDR ATPFKFTLGQ GQVIKGWDIG
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLSK E

Arabidopsis Description

ROF1Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:B3H746]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.