CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
plasma membrane 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH46622	Soybean	cytosol, nucleus	97.24	97.24
KRH07424	Soybean	cytosol	84.93	80.49
VIT_00s0958g00020.t01	Wine grape	cytosol, peroxisome	50.37	80.12
KRH66151	Soybean	nucleus	84.38	78.87
KRH58815	Soybean	peroxisome	75.55	72.11
KRH42713	Soybean	cytosol	74.82	71.4
PGSC0003DMT400080935	Potato	cytosol	75.0	70.34
Solyc09g092690.2.1	Tomato	cytosol	74.26	69.54
KRH66687	Soybean	cytosol	53.31	53.7
KRG95045	Soybean	cytosol	12.5	49.28
KRG88759	Soybean	cytosol	51.1	47.77
KRH05556	Soybean	cytosol	50.74	47.34
KRH21780	Soybean	cytosol, mitochondrion, plastid	8.82	42.86
KRH10589	Soybean	cytosol	8.82	34.29
KRG97894	Soybean	cytosol	11.76	34.04
KRH30990	Soybean	cytosol	11.76	34.04
Os01t0562400-01	Rice	mitochondrion	35.85	33.85
Os01t0563000-04	Rice	plasma membrane	36.4	30.37
KRH62430	Soybean	cytosol	29.23	25.56
KRH23877	Soybean	cytosol, endoplasmic reticulum, nucleus	17.28	25.41
KRH75755	Soybean	cytosol, endoplasmic reticulum	29.04	25.4
KRH39924	Soybean	endoplasmic reticulum	16.91	24.86
Os01t0564300-01	Rice	cytosol, plasma membrane	18.93	24.41

Protein Annotations

Gene3D:1.25.40.10	EntrezGene:100781128	MapMan:18.12.2	Gene3D:3.10.50.40	Gene3D:3.30.1670.20	EMBL:ACUP02011225
ncoils:Coil	EnsemblPlantsGene:GLYMA_18G158100	GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824
GO:GO:0005488	GO:GO:0005515	GO:GO:0005528	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016853
GO:GO:0019538	GO:GO:0061077	UniProt:I1N1Y9	InterPro:IPR001179	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR019734	ProteinID:KRG99619.1	EnsemblPlants:KRG99620	ProteinID:KRG99620	ProteinID:KRG99620.1	PFAM:PF00254
PFAM:PF07719	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50005	PFscan:PS50059	PFscan:PS50293
PANTHER:PTHR10516	PANTHER:PTHR10516:SF386	SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF54534	InterPro:TPR-contain_dom
InterPro:TPR-like_helical_dom_sf	InterPro:TPR_2	InterPro:TPR_repeat	UniParc:UPI000233ECA3	SEG:seg	:

Description

hypothetical protein

Coordinates

chr18:-:35234378..35239169

Molecular Weight (calculated)

60983.4 Da

IEP (calculated)

4.879

GRAVY (calculated)

-0.699

Length

544 amino acids

Sequence
(BLAST)

001: MEEDFDIPGG EEMDLGEDEV GEEREIGSGG LKKKLLKEGQ GWETPEVGDE VQVHYTGTLL DGTKFDSSRD RDSPFSFTLG QGQVIKGWDE GIKTMKKGEN
101: AIFTIPPELA YGESGSPPTI PPNATLQFDV ELLSWTSVKD ICKDGGIFKK IITEGEKWEN PKDPDEVLVK YEVHLENGKL LAKSDGEEFT VREGHYCPAL
201: SKAVKTMKKG EKVLLTVKPQ YGFGEKGKPE QGDEGAVPPN ATLQITLELV SWKTVSEVTD DKKVIKKILK EGEGYERPNE GAIVKVKLIG KLQDGTAFLK
301: KGHDEEEKLF EFKTDEEQVV DGLDRAVLTM KKGEVALLTI APDYAFGTSE SQQELAVVPP NSTVYFEVEL VSFEKEKESW DLNTEEKLEA AGKKKEEGNV
401: LFKASKYARA SKRYEKAVKY IEYDSSFGEE EKKQAKTLKV ACNLNNAACK LKLKDYKEAE KLCTKVLDLE STNVKALYRR AQAHMQLTNL DLAELDIKKA
501: LDIDPNNRDV KLEYRTLKEK VKENNRKEAQ FYGNMINKMT KIGS

Best Arabidopsis Sequence Match ( AT3G25230.1 )
(BLAST)

001: MDANFEMPPV GGMNDDDDMD FGDGASFLKV GEEKEIQQGL KKKLLKEGEG YETPENGDEV EVHYTGTLLD GTKFDSSRDR ATPFKFTLGQ GQVIKGWDIG
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLSK E

Arabidopsis Description

ROF1Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:B3H746]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.