Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- plasma membrane 1
- vacuole 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc09g092690.2.1 | Tomato | cytosol | 93.45 | 93.29 |
| PGSC0003DMT400051809 | Potato | cytosol | 75.0 | 75.78 |
| KRH46622 | Soybean | cytosol, nucleus | 71.03 | 75.74 |
| VIT_00s0958g00020.t01 | Wine grape | cytosol, peroxisome | 44.48 | 75.44 |
| KRG99620 | Soybean | cytosol | 70.34 | 75.0 |
| KRH66151 | Soybean | nucleus | 74.31 | 74.06 |
| KRH07424 | Soybean | cytosol | 73.28 | 74.04 |
| PGSC0003DMT400053619 | Potato | cytosol | 71.9 | 55.16 |
| PGSC0003DMT400018490 | Potato | cytosol | 42.59 | 51.78 |
| PGSC0003DMT400027559 | Potato | cytosol, nucleus, plastid | 50.17 | 49.83 |
| PGSC0003DMT400083778 | Potato | cytosol | 8.28 | 42.86 |
| PGSC0003DMT400016257 | Potato | nucleus | 10.86 | 33.87 |
| Os01t0562400-01 | Rice | mitochondrion | 33.28 | 33.51 |
| Os01t0563000-04 | Rice | plasma membrane | 35.69 | 31.75 |
| PGSC0003DMT400017681 | Potato | cytosol | 17.24 | 27.17 |
| Os01t0564300-01 | Rice | cytosol, plasma membrane | 18.28 | 25.12 |
Protein Annotations
| Gene3D:1.25.40.10 | EntrezGene:102594043 | MapMan:18.12.2 | Gene3D:3.10.50.40 | Gene3D:3.30.1670.20 | ncoils:Coil |
| GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016853 | GO:GO:0019538 |
| InterPro:IPR001179 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | UniProt:M1D471 | PFAM:PF00254 |
| PFAM:PF00515 | EnsemblPlantsGene:PGSC0003DMG400031522 | PGSC:PGSC0003DMG400031522 | EnsemblPlants:PGSC0003DMT400080935 | InterPro:PPIase_FKBP | InterPro:PPIase_FKBP_dom |
| PFscan:PS50005 | PFscan:PS50059 | PFscan:PS50293 | PANTHER:PTHR10516 | PANTHER:PTHR10516:SF386 | SMART:SM00028 |
| SUPFAM:SSF48452 | SUPFAM:SSF54534 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_1 | InterPro:TPR_repeat |
| UniParc:UPI000296722C | RefSeq:XP_006358774.1 | SEG:seg | : | : | : |
Description
Peptidylprolyl isomerase [Source:PGSC_GENE;Acc:PGSC0003DMG400031522]
Coordinates
chr9:+:60104083..60108565
Molecular Weight (calculated)
64932.5 Da
IEP (calculated)
4.816
GRAVY (calculated)
-0.553
Length
580 amino acids
Sequence
(BLAST)
(BLAST)
001: MDEDFEFPVS SSNNAAAEEM DIDMGMGMDD FSEPDPIMKV DEEKEIGKTG IKKKLLKEGE GWEHPSKGDE VEVHYVGTLL DGTQFDSSRD RGTPFKFKLG
101: EGQVIKGWDE GIKTMKKGEK ALLTIPPDMA YGESGSPPTI PPNATLQFEV ELLSWISVKD ICKDGGIFKK ILVEGEGWQN PKNLDEVFVK YEARLEDGTV
201: VSKSDGVEFT VQDGYFCPAL SKAVKTMKKG EKVLLTVQPQ YAFGETGKVA SRDEGGVPPN ATLQINLELI SWKIVSEVTN DKKVLKRILK EGEGYEHPND
301: GALVKVKLIG KLQDGTVFVK KGHDEEEPFE FKIDEEKVVD GLDKAVKKMK KGEIALITMQ PEYAFGAFDS PQELAVVPGN SIVYYEVELV SFVKEKESWD
401: MNTQEKIEAA GKKKEEGNVL FKAGKYVRAS KRYEKAVSFI EYDSSFSDDE KQQVKLLKVS CNLNNAACKL KLKEYKEAAK LCSEVLEIDS KNVKALYRRA
501: QAYIQLVDLD LAELDIKKAL EIDPDNRDVK LEYKVLKEKI KEYNKKDAQF YGNIFAKMNK LEQSGEAKNE AAPMAIDSKA
101: EGQVIKGWDE GIKTMKKGEK ALLTIPPDMA YGESGSPPTI PPNATLQFEV ELLSWISVKD ICKDGGIFKK ILVEGEGWQN PKNLDEVFVK YEARLEDGTV
201: VSKSDGVEFT VQDGYFCPAL SKAVKTMKKG EKVLLTVQPQ YAFGETGKVA SRDEGGVPPN ATLQINLELI SWKIVSEVTN DKKVLKRILK EGEGYEHPND
301: GALVKVKLIG KLQDGTVFVK KGHDEEEPFE FKIDEEKVVD GLDKAVKKMK KGEIALITMQ PEYAFGAFDS PQELAVVPGN SIVYYEVELV SFVKEKESWD
401: MNTQEKIEAA GKKKEEGNVL FKAGKYVRAS KRYEKAVSFI EYDSSFSDDE KQQVKLLKVS CNLNNAACKL KLKEYKEAAK LCSEVLEIDS KNVKALYRRA
501: QAYIQLVDLD LAELDIKKAL EIDPDNRDVK LEYKVLKEKI KEYNKKDAQF YGNIFAKMNK LEQSGEAKNE AAPMAIDSKA
001: MAVGDQTEQN YLPKKKKSET EDDKRRKKIV PGSLLKAVVR PGGGDSSPVD GDQVIYHCTV RTLDGVVVES TRSESGGRGV PIRDVLGNSK MILGLLEGIP
101: TMHKGEIAMF KMKPEMHYAE IDCPVSAPEN FPKDDELHFE IELLDFSKAK IASDDLGVIK KILNEGEGWE SPREPYEVKA RISAKSGDGH VIFSHTEEPY
201: FFTFGKSEVP KGLEIGIGTM ARKEKAVIYV RKQYLTESPL LHIDQDLEEV HFEVELVHFI QVRDMLGDGR LIKRRIRDGR GEFPMDCPLQ DSRLSVHYKG
301: MLLNEEKTVF YDSKIDNNDQ PLEFSSGEGL VPEGFEMCTR LMLPGEIALV TCPPDYAYDK FPRPPGVSEG AHVQWEIELL GFETPRDWTG LNFQSIMDEA
401: DKIRSTGNRL FKEGKFELAK AKYEKVLREF NHVNPQDEDE GKIFGDTRNM LHLNVAACLL KMGEWRKSIE TCNKVLEAKP GHVKGLYRRG MAYIAGGEYD
501: DARNDFNMMI KVDKSSEADA TAALLKLKQK EQEAESKARK QFKGLFDKRP GEITEVGSEI REESKTIEEV DETKDNDDDE TLEEEGATTV STERKRKWSE
601: KAWPFLKNVM LQIGIQLGVV LIGILIFQFV SAKFT
101: TMHKGEIAMF KMKPEMHYAE IDCPVSAPEN FPKDDELHFE IELLDFSKAK IASDDLGVIK KILNEGEGWE SPREPYEVKA RISAKSGDGH VIFSHTEEPY
201: FFTFGKSEVP KGLEIGIGTM ARKEKAVIYV RKQYLTESPL LHIDQDLEEV HFEVELVHFI QVRDMLGDGR LIKRRIRDGR GEFPMDCPLQ DSRLSVHYKG
301: MLLNEEKTVF YDSKIDNNDQ PLEFSSGEGL VPEGFEMCTR LMLPGEIALV TCPPDYAYDK FPRPPGVSEG AHVQWEIELL GFETPRDWTG LNFQSIMDEA
401: DKIRSTGNRL FKEGKFELAK AKYEKVLREF NHVNPQDEDE GKIFGDTRNM LHLNVAACLL KMGEWRKSIE TCNKVLEAKP GHVKGLYRRG MAYIAGGEYD
501: DARNDFNMMI KVDKSSEADA TAALLKLKQK EQEAESKARK QFKGLFDKRP GEITEVGSEI REESKTIEEV DETKDNDDDE TLEEEGATTV STERKRKWSE
601: KAWPFLKNVM LQIGIQLGVV LIGILIFQFV SAKFT
Arabidopsis Description
PAS1Peptidyl-prolyl cis-trans isomerase PASTICCINO1 [Source:UniProtKB/Swiss-Prot;Acc:Q7DMA9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.