Factsheet for Os01t0563000-04

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 4
cytosol 1
vacuole 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0562400-01	Rice	mitochondrion	42.48	48.09
Os01t0564300-01	Rice	cytosol, plasma membrane	30.67	47.39
KRH46622	Soybean	cytosol, nucleus	30.83	36.95
Os04t0352400-01	Rice	mitochondrion, plasma membrane	32.82	36.58
KRG99620	Soybean	cytosol	30.37	36.4
Os08t0525600-01	Rice	cytosol, extracellular, plasma membrane, plastid	32.36	36.38
KRH07424	Soybean	cytosol	31.44	35.71
PGSC0003DMT400080935	Potato	cytosol	31.75	35.69
KRH66151	Soybean	nucleus	31.6	35.4
Solyc09g092690.2.1	Tomato	cytosol	31.29	35.11
VIT_00s0958g00020.t01	Wine grape	cytosol, peroxisome	17.64	33.63
Os02t0491400-01	Rice	plasma membrane	33.44	31.96
Os02t0760300-01	Rice	extracellular	5.21	30.36
Os05t0458100-01	Rice	nucleus	7.21	25.27
Os01t0844300-01	Rice	nucleus	7.06	24.86
Os03t0367000-01	Rice	plasma membrane	18.86	19.46
Os11t0148300-01	Rice	cytosol	8.9	15.47
Os12t0145500-01	Rice	cytosol	8.74	15.41

Protein Annotations

Gene3D:1.25.40.10	MapMan:18.12.2	Gene3D:3.10.50.40	Gene3D:3.30.1670.20	EntrezGene:4327922	EMBL:AK099552
ProteinID:BAD44998.1	ProteinID:BAS72732.1	ProteinID:BAS72736.1	ProteinID:EEE54821.1	GO:GO:0000413	GO:GO:0003674
GO:GO:0003755	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005528	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016853	GO:GO:0019538	GO:GO:0061077	InterPro:IPR001179	InterPro:IPR011990
EnsemblPlantsGene:Os01g0563000	EnsemblPlants:Os01t0563000-04	PFAM:PF00254	InterPro:PPIase_FKBP	InterPro:PPIase_FKBP_dom	PFscan:PS50059
PANTHER:PTHR10516	PANTHER:PTHR10516:SF338	UniProt:Q657L8	SUPFAM:SSF54534	InterPro:TPR-like_helical_dom_sf	UniParc:UPI000043A163
RefSeq:XP_015617662.1	RefSeq:XP_015617669.1	SEG:seg	:	:	:

Description

FK506 binding protein 73Hypothetical conserved gene. (Os01t0563000-01);Peptidyl-prolyl cis-trans isomerase, FKBP-type domain containing protein. (Os01t0563000-02);Hypothetical conserved gene. (Os01t0563000-03);Hypothetical conserved gene. (Os01t0563000-04);Hypothetical conserved gene. (Os01t0563000-05);Hypothetical conserved gene. (Os01t0563000-06)

Coordinates

chr1:+:21415236..21441439

Molecular Weight (calculated)

72877.5 Da

IEP (calculated)

4.637

GRAVY (calculated)

-0.420

Length

652 amino acids

Sequence
(BLAST)

001: MPISHELGEP DESFYNLWKE ECEELWEEED ELWGDEDVEE ELSLRHPGFN KWTVQQGAAG GDHIRAKDKN FYCFEVQVHF TGELVDGTQF VSSRENDIPE
101: RFILGQEDVM HGFNLAVSSM QPGEKAIFTI PSALTMTKAG SPASIPSNIP PNQTLRFEIE LIAMFTIIDI FKDEGILKKI VKNAEPDRKQ SHSSDFVFVK
201: YDACLMDGTS VSKSEGVEFS LTDGFFCPAF AHAVHTMKEG EEAVLIVKPK YAFGEQGRPS QGEEAAVPPD ATLYVHLLFV CWIRRIGEDQ AIAKKTLRIG
301: NSQRIHTQSQ AVVKVRLLGK LQDGTVFDRR GYGDDEPFEF VVDEGQVIDG LDESVMTMEE GEVAEFTIPP QHAFDAVGSD QHQFAFVPRN ATVVYKIELL
401: SVVNEKHPLY IPSRDEIVEY ASRKEEEGDI YFNLGKHLRA HRRYFKARQI IEYSRFGVRR GKINLIKLLS IPTSEIDAQL EEMWISCTFK AAKCAIQLGC
501: YMQASCYYSE VLNYDVANVQ AQQQQTLLQE FPDGSSRDPD AMQRGFEQFP PEYESELQLN ATFTPAAFSP RRKGEHPYRG EIIGFPDVQA NSSQPASTPS
601: TAPSTPNPAT PQTNALATGT SGTPSGSAAQ SSGTINTNRG FLFRCFGPSP TS

Best Arabidopsis Sequence Match ( AT3G25230.1 )
(BLAST)

001: MDANFEMPPV GGMNDDDDMD FGDGASFLKV GEEKEIQQGL KKKLLKEGEG YETPENGDEV EVHYTGTLLD GTKFDSSRDR ATPFKFTLGQ GQVIKGWDIG
101: IKTMKKGENA VFTIPAELAY GESGSPPTIP ANATLQFDVE LLKWDSVKDI CKDGGVFKKI LAVGEKWENP KDLDEVLVKF EAKLEDGTVV GKSDGVEFTV
201: KDGHFCPALT KAVKTMKKGE KVLLTVKPQY GFGEKGKPAS AGEGAVPPNA TLEINLELVS WKTVSEVTDD NKVVKKVLKE GDGYERPNEG AVVKVKLIGK
301: LQDGTVFLKK GHGENEEPFE FKTDEEQVVD GLDRAVMKMK KGEVALVTID PEYAFGSNES QQELAVVPPN STVTYEVDLL TFDKERESWD MNTEEKIEAA
401: SKKKEEGNSK FKGGKYSLAS KRYEKAVKFI EYDTSFSEEE KKQAKALKVA CNLNDAACKL KLKDYKQAEK LCTKVLELES TNVKALYRRA QAYMELSDLD
501: LAEFDVKKAL EIDPNNREVK LEQKRLKEKM KEFNKKEAKF YGNMFAKLSK E

Arabidopsis Description

ROF1Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:B3H746]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.