Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
- vacuole 1
- mitochondrion 1
- cytosol 2
Predictors | GFP | MS/MS | Papers | ||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
21087465
|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
Os10t0114400-01 |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT3G55520.1 | Os10t0114400-01 | AT2G01950.1 | 19000166 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
EES19645 | Sorghum | nucleus | 95.16 | 95.16 |
TraesCS1D01G282500.1 | Wheat | nucleus | 94.09 | 86.63 |
TraesCS1B01G292400.1 | Wheat | nucleus | 94.09 | 86.63 |
Os01t0844300-01 | Rice | nucleus | 84.41 | 84.86 |
KRG97894 | Soybean | cytosol | 83.87 | 82.98 |
Solyc04g011620.2.1 | Tomato | nucleus | 82.26 | 82.26 |
PGSC0003DMT400016257 | Potato | nucleus | 82.26 | 82.26 |
GSMUA_AchrUn_... | Banana | nucleus | 82.8 | 81.91 |
VIT_13s0019g01900.t01 | Wine grape | cytosol | 82.8 | 81.91 |
KRH30990 | Soybean | cytosol | 82.26 | 81.38 |
Bra007173.1-P | Field mustard | nucleus | 78.49 | 76.84 |
CDY40236 | Canola | nucleus | 78.49 | 76.84 |
AT3G55520.1 | Thale cress | nucleus | 78.49 | 76.84 |
CDY41214 | Canola | nucleus | 77.42 | 75.79 |
Zm00001d038368_P002 | Maize | extracellular | 95.7 | 70.92 |
HORVU1Hr1G072570.7 | Barley | cytosol, nucleus, plastid | 95.7 | 64.73 |
Os02t0760300-01 | Rice | extracellular | 23.12 | 38.39 |
Os04t0352400-01 | Rice | mitochondrion, plasma membrane | 37.1 | 11.79 |
Os08t0525600-01 | Rice | cytosol, extracellular, plasma membrane, plastid | 35.48 | 11.38 |
Os02t0491400-01 | Rice | plasma membrane | 37.1 | 10.12 |
Os11t0148300-01 | Rice | cytosol | 19.35 | 9.6 |
Os01t0564300-01 | Rice | cytosol, plasma membrane | 21.51 | 9.48 |
Os12t0145500-01 | Rice | cytosol | 18.82 | 9.46 |
Os01t0563000-04 | Rice | plasma membrane | 25.27 | 7.21 |
Os03t0367000-01 | Rice | plasma membrane | 23.12 | 6.8 |
Os01t0562400-01 | Rice | mitochondrion | 20.43 | 6.6 |
Protein Annotations
MapMan:18.12.2 | Gene3D:3.10.50.40 | EntrezGene:4339000 | ProteinID:AAU44015.1 | EMBL:AK061127 | ProteinID:BAF17657.1 |
ProteinID:BAS94383.1 | ncoils:Coil | ProteinID:EEE63973.1 | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 |
GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005528 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
GO:GO:0005737 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016853 |
GO:GO:0019538 | GO:GO:0061077 | InterPro:IPR001179 | EnsemblPlantsGene:Os05g0458100 | EnsemblPlants:Os05t0458100-01 | PFAM:PF00254 |
InterPro:PPIase_FKBP | InterPro:PPIase_FKBP_dom | PFscan:PS50059 | PANTHER:PTHR10516 | PANTHER:PTHR10516:SF326 | UniProt:Q65XG1 |
SUPFAM:SSF54534 | UniParc:UPI000043F434 | RefSeq:XP_015637786.1 | RefSeq:XP_015637787.1 | SEG:seg | : |
Description
FK506 binding protein 20-1a, FK506-binding protein 20Similar to FK506-binding protein 4 (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (p59 protein) (HSP binding immunophilin) (HBI) (FKBP52 protein) (52 kDa FK506 binding protein) (FKBP59). (Os05t0458100-01)
Coordinates
chr5:-:22492473..22494991
Molecular Weight (calculated)
19895.7 Da
IEP (calculated)
7.416
GRAVY (calculated)
-0.477
Length
186 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEVADLTGD GGVLKTVVRK AKDDAIAPTD SLPLVDVHYE GTLAENGEVF DTTHEDNSIF SFEIGQGAVI KAWDIALRTM KVGEVAKITC KPEYAYGSAG
101: SPPEIPPNAT LIFEVELVAC RPRKGSSLGS VSDEKARLEE LKKQRELAAA TKEEEKKKRE EAKAAAAARV QAKLDAKKGK GKGKGK
101: SPPEIPPNAT LIFEVELVAC RPRKGSSLGS VSDEKARLEE LKKQRELAAA TKEEEKKKRE EAKAAAAARV QAKLDAKKGK GKGKGK
001: MGDAIDLSGD GGVLKKIVRS AKPDAISPSD DLPVVDVHYE GILAEDEKVF DTTREDNLVF SFELGTGSVI RSWDIALKTM KVGEVAKITC KPEYAYGRAG
101: SPPDIPPDAT LIFEVELVAC RPRKGASVGS VSEERARLED LKKQREIAAA AKEDDKKKRE EAKAAAAARI QAKLDAKKGP GKGKGKGKAK
101: SPPDIPPDAT LIFEVELVAC RPRKGASVGS VSEERARLED LKKQREIAAA AKEDDKKKRE EAKAAAAARI QAKLDAKKGP GKGKGKGKAK
Arabidopsis Description
FKBP20-1Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178VDC9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.