Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- vacuole 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY41214 | Canola | nucleus | 92.63 | 92.63 |
| Bra007173.1-P | Field mustard | nucleus | 92.11 | 92.11 |
| CDY40236 | Canola | nucleus | 92.11 | 92.11 |
| VIT_13s0019g01900.t01 | Wine grape | cytosol | 80.0 | 80.85 |
| Solyc04g011620.2.1 | Tomato | nucleus | 78.95 | 80.65 |
| PGSC0003DMT400016257 | Potato | nucleus | 78.95 | 80.65 |
| KRG97894 | Soybean | cytosol | 77.89 | 78.72 |
| Os05t0458100-01 | Rice | nucleus | 76.84 | 78.49 |
| KRH30990 | Soybean | cytosol | 77.37 | 78.19 |
| EES19645 | Sorghum | nucleus | 76.32 | 77.96 |
| Os01t0844300-01 | Rice | nucleus | 74.74 | 76.76 |
| GSMUA_AchrUn_... | Banana | nucleus | 75.79 | 76.6 |
| TraesCS1D01G282500.1 | Wheat | nucleus | 75.26 | 70.79 |
| TraesCS1B01G292400.1 | Wheat | nucleus | 75.26 | 70.79 |
| Zm00001d038368_P002 | Maize | extracellular | 76.84 | 58.17 |
| HORVU1Hr1G072570.7 | Barley | cytosol, nucleus, plastid | 76.84 | 53.09 |
| AT5G64350.1 | Thale cress | cytosol, mitochondrion, plastid | 20.0 | 33.93 |
| AT5G48570.1 | Thale cress | cytosol | 37.89 | 12.46 |
| AT3G25230.2 | Thale cress | cytosol | 34.21 | 11.57 |
| AT3G21640.1 | Thale cress | cytosol | 18.42 | 9.59 |
| AT3G54010.1 | Thale cress | cytosol | 24.21 | 7.24 |
| AT1G58450.1 | Thale cress | cytosol | 4.21 | 4.88 |
Protein Annotations
| MapMan:18.12.2 | Gene3D:3.10.50.40 | EntrezGene:824717 | UniProt:A0A178VDC9 | ProteinID:AEE79396.1 | ProteinID:ANM65896.1 |
| ProteinID:ANM65897.1 | ArrayExpress:AT3G55520 | EnsemblPlantsGene:AT3G55520 | RefSeq:AT3G55520 | TAIR:AT3G55520 | RefSeq:AT3G55520-TAIR-G |
| EnsemblPlants:AT3G55520.1 | TAIR:AT3G55520.1 | EMBL:AY065308 | EMBL:AY085181 | EMBL:AY091314 | Unigene:At.48772 |
| ProteinID:CAB75910.1 | ncoils:Coil | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005528 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016853 | GO:GO:0019538 |
| GO:GO:0061077 | InterPro:IPR001179 | RefSeq:NP_001327833.1 | RefSeq:NP_001327834.1 | RefSeq:NP_191111.1 | ProteinID:OAP03784.1 |
| PFAM:PF00254 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 |
| PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 |
| PO:PO:0025022 | PO:PO:0025281 | InterPro:PPIase_FKBP | InterPro:PPIase_FKBP_dom | PFscan:PS50059 | PANTHER:PTHR10516 |
| PANTHER:PTHR10516:SF326 | UniProt:Q9M2S7 | SUPFAM:SSF54534 | UniParc:UPI00000A0B7B | SEG:seg | : |
Description
FKBP20-1Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178VDC9]
Coordinates
chr3:+:20593661..20595345
Molecular Weight (calculated)
20349.3 Da
IEP (calculated)
8.665
GRAVY (calculated)
-0.495
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDAIDLSGD GGVLKKIVRS AKPDAISPSD DLPVVDVHYE GILAEDEKVF DTTREDNLVF SFELGTGSVI RSWDIALKTM KVGEVAKITC KPEYAYGRAG
101: SPPDIPPDAT LIFEVELVAC RPRKGASVGS VSEERARLED LKKQREIAAA AKEDDKKKRE EAKAAAAARI QAKLDAKKGP GKGKGKGKAK
101: SPPDIPPDAT LIFEVELVAC RPRKGASVGS VSEERARLED LKKQREIAAA AKEDDKKKRE EAKAAAAARI QAKLDAKKGP GKGKGKGKAK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.