Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76177 | Canola | cytosol | 88.82 | 89.1 |
| Bra014849.1-P | Field mustard | cytosol | 90.08 | 89.1 |
| Bra003166.1-P | Field mustard | cytosol | 89.92 | 88.39 |
| CDX67584 | Canola | cytosol | 89.76 | 87.83 |
| CDY13167 | Canola | cytosol | 88.66 | 87.69 |
| CDY07563 | Canola | cytosol | 88.19 | 87.23 |
| VIT_08s0007g01460.t01 | Wine grape | nucleus | 69.76 | 71.45 |
| KRH62430 | Soybean | cytosol | 68.98 | 70.42 |
| KRH75755 | Soybean | cytosol, endoplasmic reticulum | 68.66 | 70.1 |
| Solyc11g011420.1.1 | Tomato | cytosol, plastid | 64.25 | 69.86 |
| TraesCS1B01G192700.1 | Wheat | cytosol, mitochondrion | 62.36 | 65.24 |
| TraesCS1D01G192100.3 | Wheat | cytosol | 64.09 | 65.22 |
| TraesCS1A01G184600.1 | Wheat | cytosol | 63.62 | 64.74 |
| Os03t0367000-01 | Rice | plasma membrane | 64.25 | 64.56 |
| EER94808 | Sorghum | cytosol | 63.94 | 64.44 |
| GSMUA_Achr11P... | Banana | cytosol, mitochondrion, nucleus | 62.36 | 63.46 |
| Zm00001d047426_P003 | Maize | cytosol | 63.46 | 61.43 |
| HORVU4Hr1G042800.9 | Barley | cytosol | 61.1 | 58.43 |
| AT3G25230.2 | Thale cress | cytosol | 26.3 | 29.72 |
| AT5G64350.1 | Thale cress | cytosol, mitochondrion, plastid | 5.2 | 29.46 |
| AT5G48570.1 | Thale cress | cytosol | 26.14 | 28.72 |
| AT1G58450.1 | Thale cress | cytosol | 6.77 | 26.22 |
| AT3G55520.1 | Thale cress | nucleus | 7.24 | 24.21 |
| AT3G21640.1 | Thale cress | cytosol | 12.6 | 21.92 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:18.12.2 | Gene3D:3.10.50.40 | EntrezGene:824568 | ProteinID:AEE79174.1 | ProteinID:AEE79175.1 |
| ArrayExpress:AT3G54010 | EnsemblPlantsGene:AT3G54010 | RefSeq:AT3G54010 | TAIR:AT3G54010 | RefSeq:AT3G54010-TAIR-G | EnsemblPlants:AT3G54010.1 |
| TAIR:AT3G54010.1 | EMBL:AY056265 | EMBL:AY096635 | Unigene:At.10785 | ProteinID:CAB88363.1 | GO:GO:0000003 |
| GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005528 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0005789 | GO:GO:0005829 | GO:GO:0006464 | GO:GO:0006629 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009653 |
| GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009735 | GO:GO:0009736 | GO:GO:0009790 | GO:GO:0009791 |
| GO:GO:0009793 | GO:GO:0009826 | GO:GO:0009880 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0016043 | GO:GO:0016049 | GO:GO:0016853 | GO:GO:0019538 | GO:GO:0030010 | GO:GO:0030154 |
| GO:GO:0040007 | GO:GO:0042761 | GO:GO:0048364 | GO:GO:0048527 | GO:GO:0061077 | GO:GO:0099402 |
| InterPro:IPR001179 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 | RefSeq:NP_566993.1 | RefSeq:NP_850701.1 |
| InterPro:PAS1 | Symbol:PAS1 | PFAM:PF00254 | PFAM:PF13174 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | InterPro:PPIase_FKBP | InterPro:PPIase_FKBP_dom |
| PFscan:PS50005 | PFscan:PS50059 | PFscan:PS50293 | PANTHER:PTHR10516 | PANTHER:PTHR10516:SF268 | UniProt:Q7DMA9 |
| SMART:SM00028 | SUPFAM:SSF48452 | SUPFAM:SSF54534 | TMHMM:TMhelix | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf |
| InterPro:TPR_repeat | EMBL:U77365 | EMBL:U77366 | UniParc:UPI000009E0CA | SEG:seg | : |
Description
PAS1Peptidyl-prolyl cis-trans isomerase PASTICCINO1 [Source:UniProtKB/Swiss-Prot;Acc:Q7DMA9]
Coordinates
chr3:+:20000821..20005280
Molecular Weight (calculated)
71800.8 Da
IEP (calculated)
5.119
GRAVY (calculated)
-0.548
Length
635 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVGDQTEQN YLPKKKKSET EDDKRRKKIV PGSLLKAVVR PGGGDSSPVD GDQVIYHCTV RTLDGVVVES TRSESGGRGV PIRDVLGNSK MILGLLEGIP
101: TMHKGEIAMF KMKPEMHYAE IDCPVSAPEN FPKDDELHFE IELLDFSKAK IASDDLGVIK KILNEGEGWE SPREPYEVKA RISAKSGDGH VIFSHTEEPY
201: FFTFGKSEVP KGLEIGIGTM ARKEKAVIYV RKQYLTESPL LHIDQDLEEV HFEVELVHFI QVRDMLGDGR LIKRRIRDGR GEFPMDCPLQ DSRLSVHYKG
301: MLLNEEKTVF YDSKIDNNDQ PLEFSSGEGL VPEGFEMCTR LMLPGEIALV TCPPDYAYDK FPRPPGVSEG AHVQWEIELL GFETPRDWTG LNFQSIMDEA
401: DKIRSTGNRL FKEGKFELAK AKYEKVLREF NHVNPQDEDE GKIFGDTRNM LHLNVAACLL KMGEWRKSIE TCNKVLEAKP GHVKGLYRRG MAYIAGGEYD
501: DARNDFNMMI KVDKSSEADA TAALLKLKQK EQEAESKARK QFKGLFDKRP GEITEVGSEI REESKTIEEV DETKDNDDDE TLEEEGATTV STERKRKWSE
601: KAWPFLKNVM LQIGIQLGVV LIGILIFQFV SAKFT
101: TMHKGEIAMF KMKPEMHYAE IDCPVSAPEN FPKDDELHFE IELLDFSKAK IASDDLGVIK KILNEGEGWE SPREPYEVKA RISAKSGDGH VIFSHTEEPY
201: FFTFGKSEVP KGLEIGIGTM ARKEKAVIYV RKQYLTESPL LHIDQDLEEV HFEVELVHFI QVRDMLGDGR LIKRRIRDGR GEFPMDCPLQ DSRLSVHYKG
301: MLLNEEKTVF YDSKIDNNDQ PLEFSSGEGL VPEGFEMCTR LMLPGEIALV TCPPDYAYDK FPRPPGVSEG AHVQWEIELL GFETPRDWTG LNFQSIMDEA
401: DKIRSTGNRL FKEGKFELAK AKYEKVLREF NHVNPQDEDE GKIFGDTRNM LHLNVAACLL KMGEWRKSIE TCNKVLEAKP GHVKGLYRRG MAYIAGGEYD
501: DARNDFNMMI KVDKSSEADA TAALLKLKQK EQEAESKARK QFKGLFDKRP GEITEVGSEI REESKTIEEV DETKDNDDDE TLEEEGATTV STERKRKWSE
601: KAWPFLKNVM LQIGIQLGVV LIGILIFQFV SAKFT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.