Factsheet for GSMUA_Achr11P24020_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus, cytosol

Predictor Summary:

cytosol 2
nucleus 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
MultiLoc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G192700.1	Wheat	cytosol, mitochondrion	68.27	70.18
VIT_08s0007g01460.t01	Wine grape	nucleus	69.71	70.16
Solyc11g011420.1.1	Tomato	cytosol, plastid	65.06	69.52
Os03t0367000-01	Rice	plasma membrane	69.71	68.83
TraesCS1D01G192100.3	Wheat	cytosol	68.11	68.11
TraesCS1A01G184600.1	Wheat	cytosol	67.95	67.95
EER94808	Sorghum	cytosol	68.59	67.94
KRH75755	Soybean	cytosol, endoplasmic reticulum	65.87	66.08
KRH62430	Soybean	cytosol	65.71	65.92
Zm00001d047426_P003	Maize	cytosol	68.11	64.79
CDX76177	Canola	cytosol	63.94	63.03
AT3G54010.1	Thale cress	cytosol	63.46	62.36
Bra014849.1-P	Field mustard	cytosol	64.1	62.31
CDY13167	Canola	cytosol	62.82	61.06
CDY07563	Canola	cytosol	62.18	60.44
Bra003166.1-P	Field mustard	cytosol	62.34	60.22
CDX67584	Canola	cytosol	62.18	59.78
HORVU4Hr1G042800.9	Barley	cytosol	63.14	59.34
GSMUA_Achr7P22780_001	Banana	cytosol	26.44	30.05
GSMUA_Achr6P27770_001	Banana	cytosol	27.4	29.58
GSMUA_AchrUn_...	Banana	cytosol	27.24	29.26
GSMUA_Achr10P...	Banana	cytosol	26.12	29.0
GSMUA_Achr8P04930_001	Banana	cytosol	25.32	24.88
GSMUA_Achr6P12690_001	Banana	cytosol	13.78	22.99
GSMUA_AchrUn_...	Banana	nucleus	6.89	22.87
GSMUA_Achr5P05550_001	Banana	cytosol, mitochondrion, plastid	4.33	22.31

Protein Annotations

Gene3D:1.25.40.10	MapMan:18.12.2	Gene3D:3.10.50.40	GO:GO:0000003	GO:GO:0000413	GO:GO:0003674
GO:GO:0003755	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005829	GO:GO:0006464	GO:GO:0006629
GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009653	GO:GO:0009719
GO:GO:0009735	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793	GO:GO:0009826	GO:GO:0009880
GO:GO:0009987	GO:GO:0016043	GO:GO:0016049	GO:GO:0016853	GO:GO:0019538	GO:GO:0030010
GO:GO:0030154	GO:GO:0040007	GO:GO:0042761	GO:GO:0048364	GO:GO:0048527	GO:GO:0099402
EnsemblPlantsGene:GSMUA_Achr11G24020_001	EnsemblPlants:GSMUA_Achr11P24020_001	EnsemblPlants:GSMUA_Achr11T24020_001	InterPro:IPR001179	InterPro:IPR011990	InterPro:IPR013026
InterPro:IPR019734	UniProt:M0RUY2	InterPro:PAS1	PFAM:PF00254	PFAM:PF13181	InterPro:PPIase_FKBP
InterPro:PPIase_FKBP_dom	PFscan:PS50005	PFscan:PS50059	PFscan:PS50293	PANTHER:PTHR10516	PANTHER:PTHR10516:SF268
SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF54534	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat
UniParc:UPI0002947EC8	SEG:seg	:	:	:	:

Description

Peptidyl-prolyl isomerase PASTICCINO1 [Source:GMGC_GENE;Acc:GSMUA_Achr11G24020_001]

Coordinates

chr11:-:23697137..23714585

Molecular Weight (calculated)

70413.3 Da

IEP (calculated)

5.012

GRAVY (calculated)

-0.504

Length

624 amino acids

Sequence
(BLAST)

001: MKAIIRSGEG QEKPVEGDQV IFHCTTRTVD GIVVDSTRLE HGGKGNPIRN VLGKSKTILG FLEGIPTMTK GEVAMFKMKP EIHYAEEDCP VTVSDDFPKN
101: DELHFEIEML DFHKVKVVGE DLGVVKKIIS EGQGWECPRE PYEVEARINA KTIDGKLVLS HSEDPYSFTF GRSELPKGLE MGIGTMARGE KAAIFLSKTY
201: MTKSSLMPMI EDHEEIQFEV ELIHFIQVRD MLGDGRLIKR RIVDGRGEFP MDCPLHDSLL RVHYKGILLN EEKTVFYDTR VDNYGQPLEF SSGEGLVPEG
301: LEMCVRLMLP GEISLVTCPP DYAYDKFTRP ATVPEGAHVQ WEIELLDFEM PKDWTGLSFQ EIMDDAEHIK NTGNRLFKEG KYELAKAKYE KVLREYNHVN
401: PQDDDEGKIF LNSRNSLHLN VAACYQKMGE FRKSIETCNK VLDASPVHVK ALYRRGMAYM LVGDSDEAKK DFEMMISIDK SSEPDATAAL LKLKQKEQEE
501: DKKAKRQFKG LFDRKPGEIA EVGGDVKDDK IPDKAENEIE NSGSEKDISK TDLDGGVTDS EHEREPEPEP ERIGFLGRLW PSGRRIIAAL GLNRCSILTL
601: KTVYVGAVCT DSDRIVHLRP PTTV

Best Arabidopsis Sequence Match ( AT3G54010.1 )
(BLAST)

001: MAVGDQTEQN YLPKKKKSET EDDKRRKKIV PGSLLKAVVR PGGGDSSPVD GDQVIYHCTV RTLDGVVVES TRSESGGRGV PIRDVLGNSK MILGLLEGIP
101: TMHKGEIAMF KMKPEMHYAE IDCPVSAPEN FPKDDELHFE IELLDFSKAK IASDDLGVIK KILNEGEGWE SPREPYEVKA RISAKSGDGH VIFSHTEEPY
201: FFTFGKSEVP KGLEIGIGTM ARKEKAVIYV RKQYLTESPL LHIDQDLEEV HFEVELVHFI QVRDMLGDGR LIKRRIRDGR GEFPMDCPLQ DSRLSVHYKG
301: MLLNEEKTVF YDSKIDNNDQ PLEFSSGEGL VPEGFEMCTR LMLPGEIALV TCPPDYAYDK FPRPPGVSEG AHVQWEIELL GFETPRDWTG LNFQSIMDEA
401: DKIRSTGNRL FKEGKFELAK AKYEKVLREF NHVNPQDEDE GKIFGDTRNM LHLNVAACLL KMGEWRKSIE TCNKVLEAKP GHVKGLYRRG MAYIAGGEYD
501: DARNDFNMMI KVDKSSEADA TAALLKLKQK EQEAESKARK QFKGLFDKRP GEITEVGSEI REESKTIEEV DETKDNDDDE TLEEEGATTV STERKRKWSE
601: KAWPFLKNVM LQIGIQLGVV LIGILIFQFV SAKFT

Arabidopsis Description

PAS1Peptidyl-prolyl cis-trans isomerase PASTICCINO1 [Source:UniProtKB/Swiss-Prot;Acc:Q7DMA9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.