Factsheet for HORVU4Hr1G042800.9

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G192100.3	Wheat	cytosol	79.22	84.29
TraesCS1B01G192700.1	Wheat	cytosol, mitochondrion	76.96	84.18
TraesCS1A01G184600.1	Wheat	cytosol	79.07	84.13
EER94808	Sorghum	cytosol	72.74	76.67
Os03t0367000-01	Rice	plasma membrane	71.23	74.84
Zm00001d047426_P003	Maize	cytosol	72.74	73.63
VIT_08s0007g01460.t01	Wine grape	nucleus	60.24	64.52
KRH62430	Soybean	cytosol	59.49	63.5
KRH75755	Soybean	cytosol, endoplasmic reticulum	59.34	63.34
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, nucleus	59.34	63.14
Solyc11g011420.1.1	Tomato	cytosol, plastid	54.97	62.5
CDX76177	Canola	cytosol	58.89	61.77
AT3G54010.1	Thale cress	cytosol	58.43	61.1
Bra014849.1-P	Field mustard	cytosol	58.89	60.9
CDY13167	Canola	cytosol	58.28	60.28
CDY07563	Canola	cytosol	57.53	59.5
Bra003166.1-P	Field mustard	cytosol	57.08	58.67
CDX67584	Canola	cytosol	56.78	58.09
HORVU7Hr1G053170.6	Barley	cytosol	25.9	30.39
HORVU2Hr1G067750.9	Barley	cytosol	25.0	28.04
HORVU2Hr1G007980.1	Barley	cytosol, mitochondrion	26.36	26.0
HORVU5Hr1G041060.1	Barley	cytosol, plastid	13.4	20.94
HORVU6Hr1G077340.1	Barley	mitochondrion	6.48	17.84
HORVU1Hr1G072570.7	Barley	cytosol, nucleus, plastid	7.23	17.45
HORVU2Hr1G008030.1	Barley	cytosol, nucleus	1.81	15.79

Protein Annotations

Gene3D:1.25.40.10	MapMan:18.12.2	Gene3D:3.10.50.40	UniProt:A0A287NVM9	ncoils:Coil	GO:GO:0000003
GO:GO:0000413	GO:GO:0003674	GO:GO:0003755	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005829
GO:GO:0006464	GO:GO:0006629	GO:GO:0007275	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009653	GO:GO:0009719	GO:GO:0009735	GO:GO:0009790	GO:GO:0009791	GO:GO:0009793
GO:GO:0009826	GO:GO:0009880	GO:GO:0009987	GO:GO:0016043	GO:GO:0016049	GO:GO:0016853
GO:GO:0019538	GO:GO:0030010	GO:GO:0030154	GO:GO:0040007	GO:GO:0042761	GO:GO:0048364
GO:GO:0048527	GO:GO:0099402	EnsemblPlantsGene:HORVU4Hr1G042800	EnsemblPlants:HORVU4Hr1G042800.9	InterPro:IPR001179	InterPro:IPR011990
InterPro:IPR013026	InterPro:IPR019734	InterPro:PAS1	PFAM:PF00254	PFAM:PF13181	InterPro:PPIase_FKBP
InterPro:PPIase_FKBP_dom	PFscan:PS50005	PFscan:PS50059	PFscan:PS50293	PANTHER:PTHR10516	PANTHER:PTHR10516:SF268
SMART:SM00028	SUPFAM:SSF48452	SUPFAM:SSF54534	InterPro:TPR-contain_dom	InterPro:TPR-like_helical_dom_sf	InterPro:TPR_repeat
UniParc:UPI000B46F52D	SEG:seg	:	:	:	:

Description

Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A287NVM9]

Coordinates

chrchr4H:-:339944751..340005832

Molecular Weight (calculated)

73426.1 Da

IEP (calculated)

6.415

GRAVY (calculated)

-0.439

Length

664 amino acids

Sequence
(BLAST)

001: ARKGEPAACA RARVSGVAVF RGGALVVIAP ENRWWSTWTR PTGSRGLSLY PPPAVDAGER GSVQVQPSLS SAAATSPAQL LPAPPLNAHI RDWRGDRSPP
101: HSLSASAAVP QASAMSHDDP PPAPAKTKSP AEEAVEKRRG KLTPGSLMKA VIRSGRGDAT PADGDQVILH CTIRTMEGIV VNSTRREHGG KGIPLRFVSG
201: KSKMILGFAE GFPTMLEGEI AMFKMEPKIH YAEDDCPVTP PDGFPKDDEL QFEVEMLNFF KAKVVTEDLG VVKKIVDEGN GWETPREPYE VTARITARTA
301: DGKEILPSKD VPYFFTMGKS EAPIGLEMGI GTMARKEKAT IYVSSTYLTE SSLMPQLEGL EEVHFEVELV QFTQVRDMLG DGRLIKRRVV DGSGEFPMDC
401: PLHDSLLKVH YKGMLLDEPK SVFYDTQIDN VGEPLEFCSG EGLVPEGFEM CVRLMLPGEK SIVTCPPDFA YDKFPRPANV PEGAHVLWEI ELLGFEVPKD
501: WTGLTFKEIM EEADKIKNTG NRLFKEGKLE LAKAKYEKLL REYNHVHPQD DEEGKIFANS RSSLHLNVAA CYRKMGEYRK SIEACNKVLD ANPVHVKALY
601: RRGMSYMLGG DFDDAKNDFE KMVTIDKSSE PDATAALVKL KQKEQEIEKK ARKQFKGLFD KKPG

Best Arabidopsis Sequence Match ( AT3G54010.1 )
(BLAST)

001: MAVGDQTEQN YLPKKKKSET EDDKRRKKIV PGSLLKAVVR PGGGDSSPVD GDQVIYHCTV RTLDGVVVES TRSESGGRGV PIRDVLGNSK MILGLLEGIP
101: TMHKGEIAMF KMKPEMHYAE IDCPVSAPEN FPKDDELHFE IELLDFSKAK IASDDLGVIK KILNEGEGWE SPREPYEVKA RISAKSGDGH VIFSHTEEPY
201: FFTFGKSEVP KGLEIGIGTM ARKEKAVIYV RKQYLTESPL LHIDQDLEEV HFEVELVHFI QVRDMLGDGR LIKRRIRDGR GEFPMDCPLQ DSRLSVHYKG
301: MLLNEEKTVF YDSKIDNNDQ PLEFSSGEGL VPEGFEMCTR LMLPGEIALV TCPPDYAYDK FPRPPGVSEG AHVQWEIELL GFETPRDWTG LNFQSIMDEA
401: DKIRSTGNRL FKEGKFELAK AKYEKVLREF NHVNPQDEDE GKIFGDTRNM LHLNVAACLL KMGEWRKSIE TCNKVLEAKP GHVKGLYRRG MAYIAGGEYD
501: DARNDFNMMI KVDKSSEADA TAALLKLKQK EQEAESKARK QFKGLFDKRP GEITEVGSEI REESKTIEEV DETKDNDDDE TLEEEGATTV STERKRKWSE
601: KAWPFLKNVM LQIGIQLGVV LIGILIFQFV SAKFT

Arabidopsis Description

PAS1Peptidyl-prolyl cis-trans isomerase PASTICCINO1 [Source:UniProtKB/Swiss-Prot;Acc:Q7DMA9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.