Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- vacuole 1
- mitochondrion 1
- cytoskeleton 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os04t0107900-02 | |
| Os04t0459000-01 | |
| Os04t0620000-01 | |
| Os04t0642000-01 | |
| Os08t0564300-04 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os12t0145500-01 | Rice | cytosol | 86.93 | 88.11 |
| EES07974 | Sorghum | cytosol | 84.27 | 85.87 |
| Zm00001d004930_P001 | Maize | mitochondrion | 84.8 | 85.03 |
| TraesCS5A01G134500.3 | Wheat | cytosol | 82.93 | 84.28 |
| TraesCS5D01G139000.1 | Wheat | cytosol | 82.67 | 83.78 |
| TraesCS5B01G131200.1 | Wheat | cytosol | 82.67 | 83.78 |
| CDY34049 | Canola | cytosol | 21.6 | 80.2 |
| VIT_13s0064g00580.t01 | Wine grape | cytosol | 72.8 | 74.79 |
| HORVU5Hr1G041060.1 | Barley | cytosol, plastid | 82.67 | 72.94 |
| GSMUA_Achr6P12690_001 | Banana | cytosol | 71.2 | 71.39 |
| PGSC0003DMT400017681 | Potato | cytosol | 69.6 | 70.92 |
| KRH23877 | Soybean | cytosol, endoplasmic reticulum, nucleus | 68.0 | 68.92 |
| Solyc01g087470.2.1 | Tomato | cytosol | 59.47 | 68.62 |
| CDY29061 | Canola | cytosol | 65.07 | 68.35 |
| CDX78057 | Canola | cytosol | 64.27 | 68.08 |
| Bra006895.1-P | Field mustard | cytosol | 66.13 | 67.95 |
| Bra012823.1-P | Field mustard | cytosol | 64.53 | 67.79 |
| AT3G21640.1 | Thale cress | cytosol | 65.6 | 67.4 |
| KRH39924 | Soybean | endoplasmic reticulum | 66.13 | 67.03 |
| CDX73664 | Canola | cytosol | 66.13 | 66.49 |
| CDX90622 | Canola | cytosol | 66.67 | 63.29 |
| CDY64639 | Canola | endoplasmic reticulum, extracellular | 44.0 | 61.57 |
| Os02t0760300-01 | Rice | extracellular | 7.2 | 24.11 |
| Os01t0844300-01 | Rice | nucleus | 10.13 | 20.54 |
| Os05t0458100-01 | Rice | nucleus | 9.6 | 19.35 |
| Os04t0352400-01 | Rice | mitochondrion, plasma membrane | 27.73 | 17.78 |
| Os08t0525600-01 | Rice | cytosol, extracellular, plasma membrane, plastid | 25.87 | 16.72 |
| Os02t0491400-01 | Rice | plasma membrane | 25.6 | 14.08 |
| Os03t0367000-01 | Rice | plasma membrane | 23.2 | 13.77 |
| Os01t0562400-01 | Rice | mitochondrion | 14.93 | 9.72 |
| Os01t0563000-04 | Rice | plasma membrane | 15.47 | 8.9 |
| Os01t0564300-01 | Rice | cytosol, plasma membrane | 9.6 | 8.53 |
Protein Annotations
| Gene3D:1.25.40.10 | MapMan:18.12.2 | Gene3D:3.10.50.40 | EntrezGene:4349772 | ProteinID:ABA91481.1 | EMBL:AK243151 |
| ProteinID:BAT12684.1 | ProteinID:EAZ17439.1 | GO:GO:0000413 | GO:GO:0003674 | GO:GO:0003755 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016853 | GO:GO:0019538 | InterPro:IPR001179 | InterPro:IPR011990 | InterPro:IPR013026 | InterPro:IPR019734 |
| EnsemblPlantsGene:Os11g0148300 | EnsemblPlants:Os11t0148300-01 | PFAM:PF00254 | PFAM:PF13181 | InterPro:PPIase_FKBP | InterPro:PPIase_FKBP_dom |
| PFscan:PS50005 | PFscan:PS50059 | PFscan:PS50293 | PANTHER:PTHR43811 | PANTHER:PTHR43811:SF21 | UniProt:Q2RAK4 |
| SMART:SM00028 | SUPFAM:SSF48452 | SUPFAM:SSF54534 | InterPro:TPR-contain_dom | InterPro:TPR-like_helical_dom_sf | InterPro:TPR_repeat |
| UniParc:UPI00006824B3 | RefSeq:XP_015616833.1 | SEG:seg | : | : | : |
Description
FK506 binding protein 42bSimilar to Peptidyl-prolyl isomerase. (Os11t0148300-01)
Coordinates
chr11:+:2229836..2233865
Molecular Weight (calculated)
42403.7 Da
IEP (calculated)
6.269
GRAVY (calculated)
-0.574
Length
375 amino acids
Sequence
(BLAST)
(BLAST)
001: MAVVEEEEGS PPAPAAAADP ASSGSSDNEI TVEEASFVHT EPPQDGSVPP VVSSNMEVLH DKVKKQVIKE GHGKKPSKFA TCFLHYRAWV QGSLHKFEDT
101: WQEQHPIELV IGKEKKQMSG LGIGVGNMRS GERALLHVGW ELGYGKEGSF SFPNVPPMAD LLYEVELIGF DDVKEGKARS DMTVEERIEA ADRRKIEGNE
201: YFKEKKFEEA MQQYEMAIAY MGDDFMFQLF GKYRDMALAV KNPCHLNMAA CLIKLKRFDE AIAQCSIVLA EDENNVKALF RRGKARAELG QTESAREDFL
301: KAKKHSPEDK EIQRELRSLA EQDKALYQKQ KELYKGLFGP RPEPKPKASN SIVRFWQWLV SLIGYLIKLF KPKNE
101: WQEQHPIELV IGKEKKQMSG LGIGVGNMRS GERALLHVGW ELGYGKEGSF SFPNVPPMAD LLYEVELIGF DDVKEGKARS DMTVEERIEA ADRRKIEGNE
201: YFKEKKFEEA MQQYEMAIAY MGDDFMFQLF GKYRDMALAV KNPCHLNMAA CLIKLKRFDE AIAQCSIVLA EDENNVKALF RRGKARAELG QTESAREDFL
301: KAKKHSPEDK EIQRELRSLA EQDKALYQKQ KELYKGLFGP RPEPKPKASN SIVRFWQWLV SLIGYLIKLF KPKNE
001: MDESLEHQTQ THDQESEIVT EGSAVVHSEP SQEGNVPPKV DSEAEVLDEK VSKQIIKEGH GSKPSKYSTC FLHYRAWTKN SQHKFEDTWH EQQPIELVLG
101: KEKKELAGLA IGVASMKSGE RALVHVGWEL AYGKEGNFSF PNVPPMADLL YEVEVIGFDE TKEGKARSDM TVEERIGAAD RRKMDGNSLF KEEKLEEAMQ
201: QYEMAIAYMG DDFMFQLYGK YQDMALAVKN PCHLNIAACL IKLKRYDEAI GHCNIVLTEE EKNPKALFRR GKAKAELGQM DSARDDFRKA QKYAPDDKAI
301: RRELRALAEQ EKALYQKQKE MYKGIFKGKD EGGAKSKSLF WLIVLWQWFV SLFSRIFRRH RVKAD
101: KEKKELAGLA IGVASMKSGE RALVHVGWEL AYGKEGNFSF PNVPPMADLL YEVEVIGFDE TKEGKARSDM TVEERIGAAD RRKMDGNSLF KEEKLEEAMQ
201: QYEMAIAYMG DDFMFQLYGK YQDMALAVKN PCHLNIAACL IKLKRYDEAI GHCNIVLTEE EKNPKALFRR GKAKAELGQM DSARDDFRKA QKYAPDDKAI
301: RRELRALAEQ EKALYQKQKE MYKGIFKGKD EGGAKSKSLF WLIVLWQWFV SLFSRIFRRH RVKAD
Arabidopsis Description
FKBP42Peptidylprolyl isomerase [Source:UniProtKB/TrEMBL;Acc:A0A178V6X3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.