Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
18557835
vacuole: 18557835 plasma membrane: 19502382 nucleus: 19621931 plasma membrane: 27800704 plasma membrane: 28056797 |
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID:
19502382
doi
Laboratory of Plant Protein Analysis, Plant Education Unit, Nara Institute of Science and Technology, Takayama, Ikoma, Japan.
msms PMID:
28056797
doi
Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China., Key Laboratory of Plant Molecular Physiology, Institute of Botany, Chinese Academy of Sciences, and National Center for Plant Gene Research, 20 Nanxincun, Xiangshan, Haidianqu, Beijing, 100093, China. twang@ibcas.ac.cn.
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os11t0148300-01 | |
| Os12t0145500-01 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT2G34660.1 | Os11t0148300-01 | AT3G21640.1 | 15133126 |
| AT2G34660.1 | Os12t0145500-01 | AT3G21640.1 | 15133126 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES12878 | Sorghum | plasma membrane | 92.56 | 92.56 |
| Zm00001d002275_P029 | Maize | plasma membrane | 91.7 | 91.59 |
| HORVU2Hr1G103620.1 | Barley | plasma membrane | 90.6 | 90.54 |
| TraesCS1A01G404300.1 | Wheat | plasma membrane | 86.48 | 87.55 |
| GSMUA_Achr8P33250_001 | Banana | endoplasmic reticulum, golgi, plastid | 60.97 | 77.74 |
| KRH21096 | Soybean | endoplasmic reticulum | 74.0 | 74.32 |
| KRH11151 | Soybean | plasma membrane | 73.82 | 74.14 |
| Solyc08g006880.2.1 | Tomato | nucleus | 73.39 | 73.43 |
| VIT_10s0003g04470.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 72.83 | 72.97 |
| CDY72149 | Canola | cytosol, peroxisome, plasma membrane | 27.29 | 72.55 |
| AT2G34660.1 | Thale cress | plasma membrane | 72.34 | 72.52 |
| CDY31633 | Canola | plasma membrane | 71.79 | 71.83 |
| CDX84290 | Canola | plasma membrane | 71.91 | 71.82 |
| Bra005402.1-P | Field mustard | plasma membrane | 71.67 | 71.71 |
| CDY12054 | Canola | plasma membrane | 71.24 | 71.41 |
| Bra010773.1-P | Field mustard | plasma membrane | 69.7 | 71.32 |
| CDY02289 | Canola | plasma membrane | 71.11 | 71.29 |
| CDY09591 | Canola | plasma membrane | 71.11 | 71.24 |
| Bra032385.1-P | Field mustard | plasma membrane | 71.05 | 71.23 |
| CDX90247 | Canola | plasma membrane | 70.74 | 70.87 |
| GSMUA_Achr7P03410_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 61.71 | 69.0 |
| AT1G30410.1 | Thale cress | plasma membrane | 63.37 | 68.83 |
| Bra014879.1-P | Field mustard | plasma membrane | 63.61 | 68.45 |
| CDX98202 | Canola | plasma membrane | 61.03 | 68.06 |
| AT1G30420.1 | Thale cress | plasma membrane | 61.4 | 66.82 |
| CDY09589 | Canola | plasma membrane | 59.86 | 65.24 |
| CDY02290 | Canola | plasma membrane | 60.97 | 61.42 |
| Bra032386.1-P | Field mustard | plasma membrane | 53.41 | 60.18 |
| Os04t0209200-01 | Rice | plasma membrane | 27.54 | 35.05 |
| Os02t0288400-00 | Rice | plasma membrane | 26.67 | 33.75 |
| Os01t0902100-00 | Rice | plasma membrane | 20.71 | 32.69 |
| Os03t0142800-01 | Rice | plasma membrane | 30.18 | 32.62 |
| Os04t0588700-01 | Rice | cytosol, plasma membrane | 26.18 | 31.96 |
| Os04t0209300-01 | Rice | plasma membrane | 28.76 | 30.95 |
| Os01t0173900-01 | Rice | plasma membrane | 28.27 | 30.56 |
| Os05t0196100-01 | Rice | plasma membrane | 27.6 | 30.22 |
| Os01t0356400-01 | Rice | plasma membrane | 28.33 | 30.19 |
| Os06t0158900-00 | Rice | plasma membrane | 26.67 | 29.27 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ncoils:Coil | GO:GO:0000166 | GO:GO:0000325 | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 |
| InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | EnsemblPlantsGene:Os04g0620000 | EnsemblPlants:Os04t0620000-01 | InterPro:P-loop_NTPase |
| PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 | PANTHER:PTHR24223 |
| PANTHER:PTHR24223:SF251 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix | UniParc:UPI000C874943 |
| SEG:seg | : | : | : | : | : |
Description
MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 1C-type ATP-binding cassette (ABC) transporter, Arsenic (As) detoxification, Reduction of As in grains (Os04t0620000-01)
Coordinates
chr4:-:31502967..31514308
Molecular Weight (calculated)
183026.0 Da
IEP (calculated)
6.848
GRAVY (calculated)
0.027
Length
1627 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGFDPLEWYC QPVNGGVWSD VENAFGAYTP CGTETLVVCI SYFALFGVCF YRIWRTTRDY TVQRYKLRSP YYNYMLGLLV VLCIAESLYR IATGTSIMNL
0101: DGETSLAPFE VTSSIIEIAA WCCMLVMIAL ETRIYIYEFR WYIRFVVIYI LVGEAAMFNL VLSVRQYYSS SSIFYLYCSE IIFKLLFGIL MVVYLPSLDS
0201: YPGYTPVRHE ALVDNTDYEP LPGGEQICPE RHANIFSRIF FSWMTPLMQQ GFKRPITDKD IWKLDSWDET ETLYNRFQKC WNNELQKPKP WLLRALHSSL
0301: GGRFWLGGFF KIGNDASQFV GPLILNLLLE SMQKGDPSWS GYIYAFSIFA GVSLGVLSEA QYFQNVMRTG FRLRSTLIAA VFRKSLRLTN DSRKKFASGR
0401: ITNLISTDAE SLQQVCQQLH SLWSAPFRIV IAMVLLYAQL GPAALVGAAM LVLLFPIQTV IISKMQKLTK EGLQRTDRRI SLMNEILAAM DTVKCYAWEQ
0501: SFQSKVQDIR DDEISWFRSA QLLAALNSFI LNSIPVIVTV VSFGVYSLLG GDLTPAKAFT SLSLFAVLRF PLFMLPNLIT QVVNCKVSLK RLEDLLLAEE
0601: RLLLPNPPLD PELPAISIKN GYFSWESQAE RPTLSNVNLD VPMGSLVAIV GSTGEGKTSL ISAMLGEIPP VSGSNTSVVL RGTVAYVPQV SWIFNATVRD
0701: NILFGSPFQP PRYEKAIDVT SLRHDLDLLP GGDLTEIGER GVNISGGQKQ RVSMARAVYS DSDVYIFDDP LSALDAHVGR QVFDKCIKEE LQHKTRVLVT
0801: NQLHFLPYVD KILVVHDGVI KEEGTFDELS NSGELFKKLM ENAGKMEEQM EEKQDESKRQ DDIKHPENGG SVIADGDMQK SQDTSNKTKQ GKSVLIKQEE
0901: RETGVISAKV LSRYKNALGG IWVVSVLFFC YALTEVLRIS SSTWLSVWTD QGSTKIHGPG YYNLIYGLLS FGQVLVTLTN SYWLITSSLR AAKRLHDAML
1001: RSILRAPMVF FHTNPLGRII NRFSKDLGDI DRNVAIFVNM FMAQISQLLS TFVLIGIVST MSLWAIMPLL ILFYAAYLYY QTTSREVKRL DSITRSPVYA
1101: QFSEALNGLS TIRAYKAYDR MANINGKSMD NNIRFTLVNM SSNRWLAIRL ETLGGIMIWF TATFAVMQNQ RAENQKAFAS TMGLLLTYTL NITNLLTAVL
1201: RLASLAENSL NAVERVGTYI ELPSEAPPVI EDSRPPPGWP SSGVVKFEDV VLRYRPELPP VLHGISFIIN GSEKVGIVGR TGAGKSSMLN ALFRIVELER
1301: GRILVDDCDT SKFGIWDLRK VLGIIPQAPV LFSGSVRFNL DPFNEHNDAD LWEALERAHL KDVIRRNALG LDAEVSEAGE NFSVGQRQLL SLARALLRRA
1401: KILVLDEATA AVDVRTDALI QKTIREEFKS CTMLIIAHRL NTVIDCDRLL ILSAGKVLEF DSPENLLSNE HSAFSKMVQS TGPSNAEYLK TLVFGDGEER
1501: LRKEESKMQD IQRKWVASNR WAVAAQFALA ASLASSHSDL LALEAAEGNN ILRKTKDAVI TLQNVLEGKH NTEIDDTLAQ YEVPSDRWWS SLYKVMEGLA
1601: MMSRLGRNRL QQPSYNFENN SSIDWDQ
0101: DGETSLAPFE VTSSIIEIAA WCCMLVMIAL ETRIYIYEFR WYIRFVVIYI LVGEAAMFNL VLSVRQYYSS SSIFYLYCSE IIFKLLFGIL MVVYLPSLDS
0201: YPGYTPVRHE ALVDNTDYEP LPGGEQICPE RHANIFSRIF FSWMTPLMQQ GFKRPITDKD IWKLDSWDET ETLYNRFQKC WNNELQKPKP WLLRALHSSL
0301: GGRFWLGGFF KIGNDASQFV GPLILNLLLE SMQKGDPSWS GYIYAFSIFA GVSLGVLSEA QYFQNVMRTG FRLRSTLIAA VFRKSLRLTN DSRKKFASGR
0401: ITNLISTDAE SLQQVCQQLH SLWSAPFRIV IAMVLLYAQL GPAALVGAAM LVLLFPIQTV IISKMQKLTK EGLQRTDRRI SLMNEILAAM DTVKCYAWEQ
0501: SFQSKVQDIR DDEISWFRSA QLLAALNSFI LNSIPVIVTV VSFGVYSLLG GDLTPAKAFT SLSLFAVLRF PLFMLPNLIT QVVNCKVSLK RLEDLLLAEE
0601: RLLLPNPPLD PELPAISIKN GYFSWESQAE RPTLSNVNLD VPMGSLVAIV GSTGEGKTSL ISAMLGEIPP VSGSNTSVVL RGTVAYVPQV SWIFNATVRD
0701: NILFGSPFQP PRYEKAIDVT SLRHDLDLLP GGDLTEIGER GVNISGGQKQ RVSMARAVYS DSDVYIFDDP LSALDAHVGR QVFDKCIKEE LQHKTRVLVT
0801: NQLHFLPYVD KILVVHDGVI KEEGTFDELS NSGELFKKLM ENAGKMEEQM EEKQDESKRQ DDIKHPENGG SVIADGDMQK SQDTSNKTKQ GKSVLIKQEE
0901: RETGVISAKV LSRYKNALGG IWVVSVLFFC YALTEVLRIS SSTWLSVWTD QGSTKIHGPG YYNLIYGLLS FGQVLVTLTN SYWLITSSLR AAKRLHDAML
1001: RSILRAPMVF FHTNPLGRII NRFSKDLGDI DRNVAIFVNM FMAQISQLLS TFVLIGIVST MSLWAIMPLL ILFYAAYLYY QTTSREVKRL DSITRSPVYA
1101: QFSEALNGLS TIRAYKAYDR MANINGKSMD NNIRFTLVNM SSNRWLAIRL ETLGGIMIWF TATFAVMQNQ RAENQKAFAS TMGLLLTYTL NITNLLTAVL
1201: RLASLAENSL NAVERVGTYI ELPSEAPPVI EDSRPPPGWP SSGVVKFEDV VLRYRPELPP VLHGISFIIN GSEKVGIVGR TGAGKSSMLN ALFRIVELER
1301: GRILVDDCDT SKFGIWDLRK VLGIIPQAPV LFSGSVRFNL DPFNEHNDAD LWEALERAHL KDVIRRNALG LDAEVSEAGE NFSVGQRQLL SLARALLRRA
1401: KILVLDEATA AVDVRTDALI QKTIREEFKS CTMLIIAHRL NTVIDCDRLL ILSAGKVLEF DSPENLLSNE HSAFSKMVQS TGPSNAEYLK TLVFGDGEER
1501: LRKEESKMQD IQRKWVASNR WAVAAQFALA ASLASSHSDL LALEAAEGNN ILRKTKDAVI TLQNVLEGKH NTEIDDTLAQ YEVPSDRWWS SLYKVMEGLA
1601: MMSRLGRNRL QQPSYNFENN SSIDWDQ
0001: MGFEFIEWYC KPVPNGVWTK QVANAFGAYT PCATDSFVLG ISQLVLLVLC LYRIWLALKD HKVERFCLRS RLYNYFLALL AAYATAEPLF RLIMGISVLD
0101: FDGPGLPPFE AFGLGVKAFA WGAVMVMILM ETKIYIRELR WYVRFAVIYA LVGDMVLLNL VLSVKEYYSS YVLYLYTSEV GAQVLFGILL FMHLPNLDTY
0201: PGYMPVRSET VDDYEYEEIS DGQQICPEKH ANIFDKIFFS WMNPLMTLGS KRPLTEKDVW YLDTWDQTET LFTSFQHSWD KELQKPQPWL LRALNNSLGG
0301: RFWWGGFWKI GNDCSQFVGP LLLNQLLKSM QEDAPAWMGY IYAFSIFVGV VFGVLCEAQY FQNVMRVGYR LRSALIAAVF RKSLRLTNEG RRKFQTGKIT
0401: NLMTTDAESL QQICQSLHTM WSAPFRIIIA LILLYQQLGV ASLIGALLLV LMFPLQTVII SKMQKLTKEG LQRTDKRIGL MNEVLAAMDT VKCYAWENSF
0501: QSKVQTVRDD ELSWFRKSQL LGALNMFILN SIPVLVTIVS FGVFTLLGGD LTPARAFTSL SLFAVLRFPL FMLPNIITQV VNANVSLKRL EEVLATEERI
0601: LLPNPPIEPG EPAISIRNGY FSWDSKGDRP TLSNINLDVP LGSLVAVVGS TGEGKTSLIS AILGELPATS DAIVTLRGSV AYVPQVSWIF NATVRDNILF
0701: GSPFDREKYE RAIDVTSLKH DLELLPGGDL TEIGERGVNI SGGQKQRVSM ARAVYSNSDV YIFDDPLSAL DAHVGQQVFE KCIKRELGQK TRVLVTNQLH
0801: FLSQVDRIVL VHEGTVKEEG TYEELSSNGP LFQRLMENAG KVEEYSEENG EAEADQTAEQ PVANGNTNGL QMDGSDDKKS KEGNKKGGKS VLIKQEERET
0901: GVVSWRVLKR YQDALGGAWV VMMLLLCYVL TEVFRVTSST WLSEWTDAGT PKSHGPLFYN LIYALLSFGQ VLVTLTNSYW LIMSSLYAAK KLHDNMLHSI
1001: LRAPMSFFHT NPLGRIINRF AKDLGDIDRT VAVFVNMFMG QVSQLLSTVV LIGIVSTLSL WAIMPLLVLF YGAYLYYQNT AREVKRMDSI SRSPVYAQFG
1101: EALNGLSTIR AYKAYDRMAD INGRSMDNNI RFTLVNMGAN RWLGIRLETL GGLMIWLTAS FAVMQNGRAE NQQAFASTMG LLLSYALNIT SLLTGVLRLA
1201: SLAENSLNAV ERVGNYIEIP PEAPPVIENN RPPPGWPSSG SIKFEDVVLR YRPQLPPVLH GVSFFIHPTD KVGIVGRTGA GKSSLLNALF RIVEVEKGRI
1301: LIDDCDVGKF GLMDLRKVLG IIPQSPVLFS GTVRFNLDPF GEHNDADLWE SLERAHLKDT IRRNPLGLDA EVSEAGENFS VGQRQLLSLS RALLRRSKIL
1401: VLDEATAAVD VRTDALIQKT IREEFKSCTM LIIAHRLNTI IDCDKILVLD SGRVQEFSSP ENLLSNEGSS FSKMVQSTGA ANAEYLRSLV LDNKRAKDDS
1501: HHLQGQRKWL ASSRWAAAAQ FALAASLTSS HNDLQSLEIE DDSSILKRTN DAVVTLRSVL EGKHDKEIAE SLEEHNISRE GWLSSLYRMV EGLAVMSRLA
1601: RNRMQQPDYN FEGNTFDWDN VEM
0101: FDGPGLPPFE AFGLGVKAFA WGAVMVMILM ETKIYIRELR WYVRFAVIYA LVGDMVLLNL VLSVKEYYSS YVLYLYTSEV GAQVLFGILL FMHLPNLDTY
0201: PGYMPVRSET VDDYEYEEIS DGQQICPEKH ANIFDKIFFS WMNPLMTLGS KRPLTEKDVW YLDTWDQTET LFTSFQHSWD KELQKPQPWL LRALNNSLGG
0301: RFWWGGFWKI GNDCSQFVGP LLLNQLLKSM QEDAPAWMGY IYAFSIFVGV VFGVLCEAQY FQNVMRVGYR LRSALIAAVF RKSLRLTNEG RRKFQTGKIT
0401: NLMTTDAESL QQICQSLHTM WSAPFRIIIA LILLYQQLGV ASLIGALLLV LMFPLQTVII SKMQKLTKEG LQRTDKRIGL MNEVLAAMDT VKCYAWENSF
0501: QSKVQTVRDD ELSWFRKSQL LGALNMFILN SIPVLVTIVS FGVFTLLGGD LTPARAFTSL SLFAVLRFPL FMLPNIITQV VNANVSLKRL EEVLATEERI
0601: LLPNPPIEPG EPAISIRNGY FSWDSKGDRP TLSNINLDVP LGSLVAVVGS TGEGKTSLIS AILGELPATS DAIVTLRGSV AYVPQVSWIF NATVRDNILF
0701: GSPFDREKYE RAIDVTSLKH DLELLPGGDL TEIGERGVNI SGGQKQRVSM ARAVYSNSDV YIFDDPLSAL DAHVGQQVFE KCIKRELGQK TRVLVTNQLH
0801: FLSQVDRIVL VHEGTVKEEG TYEELSSNGP LFQRLMENAG KVEEYSEENG EAEADQTAEQ PVANGNTNGL QMDGSDDKKS KEGNKKGGKS VLIKQEERET
0901: GVVSWRVLKR YQDALGGAWV VMMLLLCYVL TEVFRVTSST WLSEWTDAGT PKSHGPLFYN LIYALLSFGQ VLVTLTNSYW LIMSSLYAAK KLHDNMLHSI
1001: LRAPMSFFHT NPLGRIINRF AKDLGDIDRT VAVFVNMFMG QVSQLLSTVV LIGIVSTLSL WAIMPLLVLF YGAYLYYQNT AREVKRMDSI SRSPVYAQFG
1101: EALNGLSTIR AYKAYDRMAD INGRSMDNNI RFTLVNMGAN RWLGIRLETL GGLMIWLTAS FAVMQNGRAE NQQAFASTMG LLLSYALNIT SLLTGVLRLA
1201: SLAENSLNAV ERVGNYIEIP PEAPPVIENN RPPPGWPSSG SIKFEDVVLR YRPQLPPVLH GVSFFIHPTD KVGIVGRTGA GKSSLLNALF RIVEVEKGRI
1301: LIDDCDVGKF GLMDLRKVLG IIPQSPVLFS GTVRFNLDPF GEHNDADLWE SLERAHLKDT IRRNPLGLDA EVSEAGENFS VGQRQLLSLS RALLRRSKIL
1401: VLDEATAAVD VRTDALIQKT IREEFKSCTM LIIAHRLNTI IDCDKILVLD SGRVQEFSSP ENLLSNEGSS FSKMVQSTGA ANAEYLRSLV LDNKRAKDDS
1501: HHLQGQRKWL ASSRWAAAAQ FALAASLTSS HNDLQSLEIE DDSSILKRTN DAVVTLRSVL EGKHDKEIAE SLEEHNISRE GWLSSLYRMV EGLAVMSRLA
1601: RNRMQQPDYN FEGNTFDWDN VEM
Arabidopsis Description
ABCC2ABC transporter C family member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q42093]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.