Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT1G30410.1 | Thale cress | plasma membrane | 90.03 | 89.85 |
| CDY09589 | Canola | plasma membrane | 83.75 | 83.86 |
| CDY02290 | Canola | plasma membrane | 83.81 | 77.59 |
| Bra032386.1-P | Field mustard | plasma membrane | 73.38 | 75.97 |
| VIT_10s0003g04470.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 72.24 | 66.5 |
| EES12878 | Sorghum | plasma membrane | 67.36 | 61.89 |
| AT2G34660.1 | Thale cress | plasma membrane | 66.82 | 61.55 |
| Os04t0620000-01 | Rice | plasma membrane | 66.82 | 61.4 |
| Zm00001d002275_P029 | Maize | plasma membrane | 66.82 | 61.33 |
| HORVU2Hr1G103620.1 | Barley | plasma membrane | 66.49 | 61.06 |
| GSMUA_Achr8P33250_001 | Banana | endoplasmic reticulum, golgi, plastid | 52.04 | 60.97 |
| TraesCS1A01G404300.1 | Wheat | plasma membrane | 63.41 | 58.99 |
| GSMUA_Achr7P03410_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 52.51 | 53.95 |
| AT3G60970.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 25.69 | 36.47 |
| AT1G04120.1 | Thale cress | endoplasmic reticulum, plasma membrane, vacuole | 31.44 | 31.04 |
| AT2G47800.1 | Thale cress | plasma membrane | 30.97 | 30.54 |
| AT3G13100.1 | Thale cress | plasma membrane | 30.43 | 30.48 |
| AT3G62700.1 | Thale cress | plasma membrane | 31.04 | 30.15 |
| AT3G59140.1 | Thale cress | plasma membrane | 29.23 | 30.08 |
| AT2G07680.3 | Thale cress | plasma membrane | 28.29 | 29.66 |
| AT3G21250.4 | Thale cress | plasma membrane | 29.1 | 29.59 |
| AT3G60160.1 | Thale cress | plasma membrane | 29.77 | 29.55 |
| AT3G13080.1 | Thale cress | plasma membrane, plastid | 29.23 | 28.86 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.2 | Gene3D:3.40.50.300 | EntrezGene:839922 | InterPro:AAA+_ATPase | ProteinID:AAF19743.1 |
| ProteinID:AAG51094.1 | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf | InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ProteinID:AEE31215.1 |
| ArrayExpress:AT1G30420 | EnsemblPlantsGene:AT1G30420 | RefSeq:AT1G30420 | TAIR:AT1G30420 | RefSeq:AT1G30420-TAIR-G | EnsemblPlants:AT1G30420.1 |
| TAIR:AT1G30420.1 | Symbol:ATMRP12 | GO:GO:0000166 | GO:GO:0000325 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005773 | GO:GO:0005774 | GO:GO:0006810 | GO:GO:0006855 | GO:GO:0008150 |
| GO:GO:0008559 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 |
| GO:GO:0042908 | GO:GO:0055085 | InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | RefSeq:NP_001319112.1 |
| InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | PO:PO:0000293 | ScanProsite:PS00211 | PFscan:PS50893 |
| PFscan:PS50929 | PANTHER:PTHR24223 | PANTHER:PTHR24223:SF251 | UniProt:Q9C8H1 | SMART:SM00382 | SUPFAM:SSF52540 |
| SUPFAM:SSF90123 | TMHMM:TMhelix | UniParc:UPI00006A7865 | SEG:seg | : | : |
Description
ABCC11ABC transporter C family member 11 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8H1]
Coordinates
chr1:+:10748261..10756695
Molecular Weight (calculated)
168113.0 Da
IEP (calculated)
7.753
GRAVY (calculated)
0.134
Length
1495 amino acids
Sequence
(BLAST)
(BLAST)
0001: MGFEALNWYC KPIAEGFWEK TPDGAFGAYT PCAIDSLVMI VSNSVLLGLC FYRIWITLYN AKAQIYVLRK MYYHCVLWIL ACCCVVEPVL RLVMGISLFD
0101: MGDETDLPPF EVASLMVEAF AWFAMLVLIG LETKQYVKEF RWYVRFGVVY VLVADAVLLD LVLPLKNSIN RTALYLCISS RCCQALFGIL LLVYIPELDL
0201: YPDYHILNNE SLDNVEYDAL PGGVNICPER YASIFSGIYF SWMTPLMQLG YRKPITERDV WQLDQWDQTE TLIKRFQRCW TEESRRPKPW LLRALNNSLG
0301: RRFWLGGIFK VGHDLSQFVG PVILSHILQS MIEGDPAWVG YVYAFLIFFG VTFGVLCQSQ YFQHVGRVGF RLRSTLVAAI FHKSLRLTNK ARKNFASGKV
0401: TNMITTDANA LQLIAEQLHG LWSAPFRIIV SMVLLYQQLG VASIFGSLIL FLLIPFQTLI VRKMRKLTKE GLQWTDKRVG IIYEILASMD IVKCYAWEKS
0501: FESRIQGIRN EELSWFRKAQ LLSAFNSFIL NSTPVVVTLV SFGVYVLLGG DLTPARAFTS LSLFAVLRSP LSTLPNLISQ AVNANVSLQR IEELLLSEER
0601: ILAQNPPLQP GAPAISIKNG YFSWDSKTSK PTLSDINLEI PVGSLVAIVG GTGEGKTSLI SAMLGELSHA ETSSVDIRGS VAYVPQVSWI FNATLRENIL
0701: FGSDFESERY WRAIDVTALQ HDLDLFPGRD RTEIGERGVN ISGGQKQRVS MARAVYSNSD IYIFDDPFSA LDAHVAHQVF DSCVKHELKG KTRVLVTNQL
0801: HFLPLMDRII LVSEGMIKEE GNFAELSKSG TLFKKLMENA GKMDATQEVN TNDENISKLG PTVTIDVSER SLGSIQQGKW GRSMLVKQEE RETGIISWDV
0901: VMRYNKAVGG LWVVMILLVC YLTTEVLRVL SSTWLSIWTD QSTPKSYSPG FYIVVYALLG FGQVAVTFTN SFWLISSSLH AAKRLHDAML NSILRAPMLF
1001: FETNPTGRVI NRFSKDIGDI DRNVANLMNM FMNQLWQLLS TFALIGIVST ISLWAIMPLL ILFYATYIYY QSTSREVRRL DSVTRSPIYA LFGEALNGLS
1101: SIRAYKAYDR MAKINGKSMD NNIRFTLAST SSNRWLTIRS ESLGGVMIWL TATFAVLRYG NAENQAVFAS TMGLLLSYTL NITTLLSGVL RQASKAENSL
1201: NSVERVGNYI DLPSEATAII ENNRPVSGWP SRGSIQFEDV HLRYRPGLPP VLHGLSFFVY PSEKVGVVGR TGAGKSSMLN ALYRIVELEK GRILIDDYDV
1301: AKFGLTDLRR VLSIIPQSPV LFSGTVRFNI DPFSEHNDAD LWEALERAHI KDVIDRNPFG LDAEVSEGGE NFSVGQRQLL SLARALLRRS KILFLDEATA
1401: SVDVRTDSLI QRTIREEFKS CTMLIIAHRL NTIIDCDKIL VLSSGQVLEY DSPQELLSRD TSAFFKMVHS TGPENGQYLS NLVFERRGNG MSQGG
0101: MGDETDLPPF EVASLMVEAF AWFAMLVLIG LETKQYVKEF RWYVRFGVVY VLVADAVLLD LVLPLKNSIN RTALYLCISS RCCQALFGIL LLVYIPELDL
0201: YPDYHILNNE SLDNVEYDAL PGGVNICPER YASIFSGIYF SWMTPLMQLG YRKPITERDV WQLDQWDQTE TLIKRFQRCW TEESRRPKPW LLRALNNSLG
0301: RRFWLGGIFK VGHDLSQFVG PVILSHILQS MIEGDPAWVG YVYAFLIFFG VTFGVLCQSQ YFQHVGRVGF RLRSTLVAAI FHKSLRLTNK ARKNFASGKV
0401: TNMITTDANA LQLIAEQLHG LWSAPFRIIV SMVLLYQQLG VASIFGSLIL FLLIPFQTLI VRKMRKLTKE GLQWTDKRVG IIYEILASMD IVKCYAWEKS
0501: FESRIQGIRN EELSWFRKAQ LLSAFNSFIL NSTPVVVTLV SFGVYVLLGG DLTPARAFTS LSLFAVLRSP LSTLPNLISQ AVNANVSLQR IEELLLSEER
0601: ILAQNPPLQP GAPAISIKNG YFSWDSKTSK PTLSDINLEI PVGSLVAIVG GTGEGKTSLI SAMLGELSHA ETSSVDIRGS VAYVPQVSWI FNATLRENIL
0701: FGSDFESERY WRAIDVTALQ HDLDLFPGRD RTEIGERGVN ISGGQKQRVS MARAVYSNSD IYIFDDPFSA LDAHVAHQVF DSCVKHELKG KTRVLVTNQL
0801: HFLPLMDRII LVSEGMIKEE GNFAELSKSG TLFKKLMENA GKMDATQEVN TNDENISKLG PTVTIDVSER SLGSIQQGKW GRSMLVKQEE RETGIISWDV
0901: VMRYNKAVGG LWVVMILLVC YLTTEVLRVL SSTWLSIWTD QSTPKSYSPG FYIVVYALLG FGQVAVTFTN SFWLISSSLH AAKRLHDAML NSILRAPMLF
1001: FETNPTGRVI NRFSKDIGDI DRNVANLMNM FMNQLWQLLS TFALIGIVST ISLWAIMPLL ILFYATYIYY QSTSREVRRL DSVTRSPIYA LFGEALNGLS
1101: SIRAYKAYDR MAKINGKSMD NNIRFTLAST SSNRWLTIRS ESLGGVMIWL TATFAVLRYG NAENQAVFAS TMGLLLSYTL NITTLLSGVL RQASKAENSL
1201: NSVERVGNYI DLPSEATAII ENNRPVSGWP SRGSIQFEDV HLRYRPGLPP VLHGLSFFVY PSEKVGVVGR TGAGKSSMLN ALYRIVELEK GRILIDDYDV
1301: AKFGLTDLRR VLSIIPQSPV LFSGTVRFNI DPFSEHNDAD LWEALERAHI KDVIDRNPFG LDAEVSEGGE NFSVGQRQLL SLARALLRRS KILFLDEATA
1401: SVDVRTDSLI QRTIREEFKS CTMLIIAHRL NTIIDCDKIL VLSSGQVLEY DSPQELLSRD TSAFFKMVHS TGPENGQYLS NLVFERRGNG MSQGG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.