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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, plastid

Predictor Summary:
  • plastid 3
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane, plastid
Any Predictor:endoplasmic reticulum, plasma membrane, plastid
BaCelLo:plastid
ChloroP:plastid
MultiLoc:endoplasmic reticulum
Predotar:plastid
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY71198 Canola endoplasmic reticulum, mitochondrion, plasma membrane 31.84 95.26
CDX82557 Canola plasma membrane 31.04 93.63
CDY51899 Canola endoplasmic reticulum, plasma membrane, vacuole 33.36 92.83
CDX82552 Canola plasma membrane 75.36 92.69
Bra001490.1-P Field mustard plasma membrane 86.46 88.51
Bra001488.1-P Field mustard plasma membrane, plastid 85.6 86.81
Bra039368.1-P Field mustard plasma membrane 82.23 84.29
KRH73882 Soybean plasma membrane 63.47 74.38
PGSC0003DMT400057099 Potato endoplasmic reticulum, plasma membrane 62.09 71.21
KXG31741 Sorghum plasma membrane 57.99 70.07
KRG99624 Soybean plasma membrane 68.63 69.83
VIT_19s0015g00040.t01 Wine grape plasma membrane 49.41 69.39
KRH14256 Soybean plasma membrane 68.36 69.28
KRH73881 Soybean plasma membrane 68.3 69.26
KRH46626 Soybean plasma membrane 66.51 68.93
Zm00001d048327_P001 Maize cytosol 1.85 68.29
KRG98556 Soybean nucleus 57.53 66.95
AT3G13100.1 Thale cress plasma membrane 64.99 65.91
KRH46325 Soybean plasma membrane 64.93 65.71
KRH73880 Soybean plasma membrane 53.24 65.69
KRH46324 Soybean plasma membrane 64.93 65.4
OQU92792 Sorghum plasma membrane 58.59 64.7
HORVU3Hr1G024210.3 Barley vacuole 60.77 64.61
TraesCS1A01G310100.1 Wheat cytosol 32.03 64.32
KRH01233 Soybean cytosol, endoplasmic reticulum, plasma membrane 55.48 64.32
GSMUA_Achr10P... Banana plasma membrane 54.29 64.12
TraesCS3A01G129000.1 Wheat plastid 62.02 62.77
TraesCS3D01G129900.2 Wheat plasma membrane 61.96 62.66
TraesCS4A01G051100.1 Wheat plasma membrane 61.43 62.5
Os01t0173900-01 Rice plasma membrane 62.09 62.46
TraesCS4B01G253200.1 Wheat plasma membrane 61.1 62.42
TraesCS3B01G148100.2 Wheat plasma membrane, plastid 61.82 62.4
Zm00001d008733_P001 Maize plasma membrane 61.69 62.35
TraesCS4D01G253300.3 Wheat plasma membrane 60.9 62.13
TraesCS1B01G321200.1 Wheat peroxisome 51.72 60.98
TraesCS1D01G309600.1 Wheat peroxisome 51.65 60.9
Os02t0288400-00 Rice plasma membrane 51.39 60.5
TraesCS3D01G356300.2 Wheat plasma membrane 58.59 60.3
HORVU3Hr1G085890.7 Barley plasma membrane 58.12 59.9
TraesCS3B01G395000.2 Wheat plasma membrane 58.06 59.88
TraesCS2D01G420400.1 Wheat plasma membrane 50.59 59.7
KXG40096 Sorghum plasma membrane 59.11 59.23
TraesCS2B01G442400.1 Wheat plasma membrane 49.14 58.95
Zm00001d020666_P004 Maize plasma membrane 51.06 58.69
Zm00001d048329_P003 Maize plasma membrane 58.85 58.66
TraesCS3A01G362500.1 Wheat plasma membrane 55.48 58.29
AT3G60970.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 39.7 57.08
AT1G04120.1 Thale cress endoplasmic reticulum, plasma membrane, vacuole 48.88 48.88
AT3G60160.1 Thale cress plasma membrane 47.36 47.61
AT3G59140.1 Thale cress plasma membrane 37.85 39.44
AT3G21250.4 Thale cress plasma membrane 38.18 39.32
AT2G47800.1 Thale cress plasma membrane 39.3 39.25
AT3G62700.1 Thale cress plasma membrane 39.5 38.86
AT2G07680.3 Thale cress plasma membrane 29.33 31.14
AT1G30420.1 Thale cress plasma membrane 28.86 29.23
AT1G30410.1 Thale cress plasma membrane 28.6 28.91
AT2G34660.1 Thale cress plasma membrane 30.18 28.16
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.2Gene3D:3.40.50.300EntrezGene:820496UniProt:A0A178VHA7InterPro:AAA+_ATPase
InterPro:ABC1_TM_domInterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSProteinID:AEE75291.1ProteinID:AEE75292.1
ArrayExpress:AT3G13080EnsemblPlantsGene:AT3G13080RefSeq:AT3G13080TAIR:AT3G13080RefSeq:AT3G13080-TAIR-GEnsemblPlants:AT3G13080.1
TAIR:AT3G13080.1Symbol:ATMRP3Unigene:At.20479ProteinID:BAB01399.1GO:GO:0000166GO:GO:0000325
GO:GO:0003674GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575
GO:GO:0005576GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005773GO:GO:0005774
GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0008559GO:GO:0009506GO:GO:0010290
GO:GO:0015431GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626
GO:GO:0042908GO:GO:0048046GO:GO:0055085InterPro:IPR003439InterPro:IPR011527InterPro:IPR036640
RefSeq:NP_187915.1RefSeq:NP_850575.1ProteinID:OAP05068.1InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664
PO:PO:0000005PO:PO:0000293PO:PO:0005052PO:PO:0007131PO:PO:0009005PO:PO:0009006
PO:PO:0009025PO:PO:0009047ScanProsite:PS00211PFscan:PS50893PFscan:PS50929PANTHER:PTHR24223
PANTHER:PTHR24223:SF181UniProt:Q9LK64SMART:SM00382SUPFAM:SSF52540SUPFAM:SSF90123TMHMM:TMhelix
EMBL:U92650UniParc:UPI00000486F7SEG:seg:::
Description
ABCC3MRP3 [Source:UniProtKB/TrEMBL;Acc:A0A178VHA7]
Coordinates
chr3:-:4195770..4201734
Molecular Weight (calculated)
168980.0 Da
IEP (calculated)
6.295
GRAVY (calculated)
0.182
Length
1514 amino acids
Sequence
(BLAST)
0001: MDFLGSTTGS GTLAMLFSFS ESILPLDSRS FLLKPLFLRW LSGFLHSVLL LVLFFSWVRK KIRGDSGVTE SLKDRRDFGF KSALFCSLAL SLLNLVLMSL
0101: SGFYWYESGW LDNEQLVSSL GFLLGMVSWG VLSICLHRCR DCEHKKAPFL LRLWLVFYLV VSCYSLVVDF VMYERRETVP VHLLVFDIVA FIAAVFLGYV
0201: AVLKKDRSNS NGVLEEPLLN GGDSRVGGDD SVELNKTNGS GEATPYSRAG ILSLLTFSWM SPLIDIGNKK TLDLEDVPQL HDTDSVVGLA PKFRSMLESP
0301: DGGERSGVTT FKLIKALYFT AQWEILVTAF FAFIYTVASY VGPALIDTFV QYLNGRRQYN HEGYVLVITF FAAKIVECLS QRHWFFRLQK VGIRMRSALV
0401: AMIYEKGLTL SCQSKQGRTS GEIINFMTVD AERIGNFSWY MHDPWMVLLQ VGLALWILYR NLGLASIAAL VATIIVMLIN FPFGRMQERF QEKLMEAKDS
0501: RMKSTSEILR NMRILKLQGW EMKFLSKIFD LRKSEEGWLK KYVYNSAVIS FVFWGAPTLV SVSTFGACIL LGIPLESGKI LSALATFRIL QEPIYNLPDT
0601: ISMIVQTKVS LDRLASYLCL DNLQPDIVER LPKGSSDVAV EVINSTLSWD VSSSNPTLKD INFKVFPGMK VAVCGTVGSG KSSLLSSLLG EVPKVSGSLK
0701: VCGTKAYVAQ SPWIQSGKIE DNILFGKPME RERYDKVLEA CSLSKDLEIL SFGDQTVIGE RGINLSGGQK QRIQIARALY QDADIYLFDD PFSAVDAHTG
0801: SHLFKEVLLG LLCSKSVIYV THQVEFLPAA DLILVMKDGR ISQAGKYNDI LNSGTDFMEL IGAHQEALAV VDSVDANSVS EKSALGQENV IVKDAIAVDE
0901: KLESQDLKND KLESVEPQRQ IIQEEEREKG SVALDVYWKY ITLAYGGALV PFILLGQVLF QLLQIGSNYW MAWATPVSED VQAPVKLSTL MIVYVALAFG
1001: SSLCILLRAT LLVTAGYKTA TELFHKMHHC IFRSPMSFFD STPSGRIMSR ASTDQSAVDL ELPYQFGSVA ITVIQLIGII GVMSQVSWLV FLVFIPVVAA
1101: SIWYQRYYIA AARELSRLVG VCKAPLIQHF SETISGATTI RSFSQEFRFR SDNMRLSDGY SRPKFYTAGA MEWLCFRLDM LSSLTFVFSL VFLVSIPTGV
1201: IDPSLAGLAV TYGLSLNTLQ AWLIWTLCNL ENKIISVERI LQYASVPSEP PLVIESNRPE QSWPSRGEVE IRDLQVRYAP HMPLVLRGIT CTFKGGLRTG
1301: IVGRTGSGKS TLIQTLFRIV EPSAGEIRID GVNILTIGLH DLRLRLSIIP QDPTMFEGTM RSNLDPLEEY TDDQIWEALD KCQLGDEVRK KEQKLDSSVS
1401: ENGDNWSMGQ RQLVCLGRVL LKRSKILVLD EATASVDTAT DNLIQKTLRE HFSDCTVITI AHRISSVIDS DMVLLLSNGI IEEYDTPVRL LEDKSSSFSK
1501: LVAEYTSRSS SSFD
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.