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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 5
  • endoplasmic reticulum 6
  • vacuole 5
  • plasma membrane 7
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:endoplasmic reticulum
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG31741 Sorghum plasma membrane 80.67 88.27
KXG40096 Sorghum plasma membrane 86.43 78.42
HORVU3Hr1G024210.3 Barley vacuole 81.18 78.16
Os01t0173900-01 Rice plasma membrane 85.19 77.61
TraesCS3A01G129000.1 Wheat plastid 81.69 74.87
TraesCS4B01G253200.1 Wheat plasma membrane 80.6 74.56
TraesCS4D01G253300.3 Wheat plasma membrane 80.67 74.53
TraesCS3D01G129900.2 Wheat plasma membrane 81.33 74.48
TraesCS4A01G051100.1 Wheat plasma membrane 80.6 74.26
TraesCS3B01G148100.2 Wheat plasma membrane, plastid 81.18 74.2
HORVU3Hr1G085890.7 Barley plasma membrane 79.07 73.79
TraesCS3D01G356300.2 Wheat plasma membrane 79.14 73.76
TraesCS3B01G395000.2 Wheat plasma membrane 78.56 73.37
CDX82557 Canola plasma membrane 26.77 73.11
CDY71198 Canola endoplasmic reticulum, mitochondrion, plasma membrane 26.77 72.53
TraesCS3A01G362500.1 Wheat plasma membrane 75.78 72.1
CDY51899 Canola endoplasmic reticulum, plasma membrane, vacuole 28.59 72.06
CDX82552 Canola plasma membrane 61.78 68.81
KRH73882 Soybean plasma membrane 63.24 67.11
PGSC0003DMT400057099 Potato endoplasmic reticulum, plasma membrane 62.29 64.7
VIT_19s0015g00040.t01 Wine grape plasma membrane 49.09 62.43
GSMUA_Achr10P... Banana plasma membrane 58.28 62.32
KRG98556 Soybean nucleus 57.77 60.88
Bra001490.1-P Field mustard plasma membrane 64.84 60.11
Bra001488.1-P Field mustard plasma membrane, plastid 65.28 59.95
KRG99624 Soybean plasma membrane 65.06 59.95
KRH46626 Soybean plasma membrane 63.53 59.62
KRH14256 Soybean plasma membrane 64.84 59.5
KRH01233 Soybean cytosol, endoplasmic reticulum, plasma membrane 56.24 59.04
KRH73881 Soybean plasma membrane 64.19 58.94
AT3G13080.1 Thale cress plasma membrane, plastid 64.7 58.59
Bra039368.1-P Field mustard plasma membrane 62.58 58.09
KRH73880 Soybean plasma membrane 50.26 56.15
KRH46325 Soybean plasma membrane 61.2 56.08
KRH46324 Soybean plasma membrane 61.05 55.69
Bra034706.1-P Field mustard plasma membrane 58.72 54.65
CDY63884 Canola plasma membrane 48.94 54.51
AT3G13100.1 Thale cress plasma membrane 58.79 53.99
CDY43395 Canola plasma membrane 57.62 53.92
Bra039348.1-P Field mustard plasma membrane 57.11 53.52
OQU93255 Sorghum plasma membrane 51.5 46.69
KXG26126 Sorghum plasma membrane 48.72 44.89
CDY44021 Canola plastid 56.24 44.49
CDY23565 Canola plastid 55.87 44.1
OQU86956 Sorghum plasma membrane 46.46 44.05
EES17847 Sorghum endoplasmic reticulum, plasma membrane, vacuole 41.5 43.37
KXG27008 Sorghum plasma membrane 49.09 42.19
KXG20196 Sorghum plasma membrane 43.33 39.68
OQU80926 Sorghum plasma membrane 41.06 37.99
KXG19351 Sorghum plasma membrane 40.85 37.74
KXG32483 Sorghum plasma membrane 41.5 37.63
KXG25638 Sorghum plasma membrane 39.97 37.38
EES10452 Sorghum plastid 41.5 36.73
EES12878 Sorghum plasma membrane 32.75 27.6
EER89345 Sorghum plasma membrane 28.74 26.89
Protein Annotations
Gene3D:1.20.1560.10MapMan:24.1.3.1.2Gene3D:3.40.50.300UniProt:A0A1Z5SA41InterPro:AAA+_ATPaseInterPro:ABC1_TM_dom
InterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSGO:GO:0000166GO:GO:0003674GO:GO:0003824
GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006810GO:GO:0008150
GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626GO:GO:0055085
InterPro:IPR003439InterPro:IPR011527InterPro:IPR036640EnsemblPlants:OQU92792ProteinID:OQU92792ProteinID:OQU92792.1
ProteinID:OQU92793.1InterPro:P-loop_NTPasePFAM:PF00005PFAM:PF00664ScanProsite:PS00211PFscan:PS50893
PFscan:PS50929PANTHER:PTHR24223PANTHER:PTHR24223:SF181SMART:SM00382EnsemblPlantsGene:SORBI_3001G413000SUPFAM:SSF52540
SUPFAM:SSF90123SignalP:SignalP-TMTMHMM:TMhelixUniParc:UPI000B8BAF00SEG:seg:
Description
hypothetical protein
Coordinates
chr1:-:69523502..69529854
Molecular Weight (calculated)
150874.0 Da
IEP (calculated)
6.786
GRAVY (calculated)
0.180
Length
1371 amino acids
Sequence
(BLAST)
0001: MAQELFPAQL RLWWALFMLL SVATVGAHAA TSLDGFLVPG RSWAVDAVSV AAAVVLLSAG FLGRRAGRGQ GQGHASEEPL LNGAREADNE NSSSADGAGA
0101: SLLTGAGFLS VLTFSWMAPL LSVGHRKTLV LEDVPSLESG DSVAGLLPSF MANLEALTRD GDSSSRKVVT AFKLTKALLR TVWWHVAVTA FYALVYNVAT
0201: YVGPYLIDSL VQYLNGDERY ASKGPLLVLA FIVAKALECL SQRHWFFRLQ QAGMRARSAL VAVVYQKSLA LSSQSRRSRT SGEMINIISV DADRVGIFGW
0301: YMHDLWLVPL QVGMAMFILY STLGLASLAA LGATVVIMLA NVPPGKMQEK FQENLMDSKD VRMKATTEIL RNMRILKLQG WEMKFLSKII ELRKTETNWL
0401: KKYLYTSATV TFVFWGTPTF VAVVTFGACI LMGIPLESGK VLSALATFRV LQEPIYVLPD TISMVIQTKV SLDRIASFLC LDELPSDAVQ RLPSGSSDFA
0501: INVNNGCFSW EASPEVPTLK DLSFQARPGM RVAVCGTVGS GKSSLLSCIL GEIPKLSGEV QTCGTTAYVS QSAWIQSGKI QENILFGKEM DAEKYDRVLE
0601: SCSLKKDLEI LPFGDQTVIG ERGINLSGGQ KQRIQIARAL YQDSDIYLFD DPFSAVDAHT GSHLFKECLL GDLGSKTVVY VTHQIEFLPT ADLILVMKDG
0701: RIAQSGKYDE ILGSGEVFME LVGAHKDALT TLDAIDSMNG GNVPSPSSGK ANPKLSRSLS SVEKKDKANN DEENAQSGQL VQEEERERGR VGFWVYWKYL
0801: TLAYKGALVP FVLLAQILFQ ILQIVSNYWM AWAAPVSKDV EPPVSMSILI YVYVILALGS SLCILVRSLF LATAAYKTAT LLFNKMHLSI FRAPMSFFDS
0901: TPSGRILNRA STDQSEVDTN ISNHMGFVAF SVIQLIGIIV VMSQVAWQVF VVFIPVFATC VWYQRYYIDT ARELQRLIGV CKAPTIQHFA ESITGSTTIR
1001: SFGKENQFVS TNSHLADAYS RPKFYNTGAR EWLCFRLDVL SSLIFAFSLI FLINLPTGLI DPGIAGLAIT YGLNLNMLQE WVVRGMCTLE NKIISVERIL
1101: QYISIPAEPP LVMSEVKLAH NWPSSGEIQL HNLHVKYAPQ LPFVLKGLAA TFPGGMKTGI VGRTGSGKST LIQALFRIVD PTIGQILIDD VNICTIGLHD
1201: LRSRLSIIPQ EPTMFEGTVR SNLDPLGEYS DDKIWEALDC CQLGDEVRKK ELKLDSPVIE NGENWSVGQR QLVCLGRVIL KRSKILVLDE ATASVDTATD
1301: NLIQKTLRQQ FSETTVITIA HRITSVLDSD MVLLLDNGVA VEHDRPTKLL EDKSSLFSKL VAEYTMRSVH T
Best Arabidopsis Sequence Match ( AT3G13080.1 )
(BLAST)
0001: MDFLGSTTGS GTLAMLFSFS ESILPLDSRS FLLKPLFLRW LSGFLHSVLL LVLFFSWVRK KIRGDSGVTE SLKDRRDFGF KSALFCSLAL SLLNLVLMSL
0101: SGFYWYESGW LDNEQLVSSL GFLLGMVSWG VLSICLHRCR DCEHKKAPFL LRLWLVFYLV VSCYSLVVDF VMYERRETVP VHLLVFDIVA FIAAVFLGYV
0201: AVLKKDRSNS NGVLEEPLLN GGDSRVGGDD SVELNKTNGS GEATPYSRAG ILSLLTFSWM SPLIDIGNKK TLDLEDVPQL HDTDSVVGLA PKFRSMLESP
0301: DGGERSGVTT FKLIKALYFT AQWEILVTAF FAFIYTVASY VGPALIDTFV QYLNGRRQYN HEGYVLVITF FAAKIVECLS QRHWFFRLQK VGIRMRSALV
0401: AMIYEKGLTL SCQSKQGRTS GEIINFMTVD AERIGNFSWY MHDPWMVLLQ VGLALWILYR NLGLASIAAL VATIIVMLIN FPFGRMQERF QEKLMEAKDS
0501: RMKSTSEILR NMRILKLQGW EMKFLSKIFD LRKSEEGWLK KYVYNSAVIS FVFWGAPTLV SVSTFGACIL LGIPLESGKI LSALATFRIL QEPIYNLPDT
0601: ISMIVQTKVS LDRLASYLCL DNLQPDIVER LPKGSSDVAV EVINSTLSWD VSSSNPTLKD INFKVFPGMK VAVCGTVGSG KSSLLSSLLG EVPKVSGSLK
0701: VCGTKAYVAQ SPWIQSGKIE DNILFGKPME RERYDKVLEA CSLSKDLEIL SFGDQTVIGE RGINLSGGQK QRIQIARALY QDADIYLFDD PFSAVDAHTG
0801: SHLFKEVLLG LLCSKSVIYV THQVEFLPAA DLILVMKDGR ISQAGKYNDI LNSGTDFMEL IGAHQEALAV VDSVDANSVS EKSALGQENV IVKDAIAVDE
0901: KLESQDLKND KLESVEPQRQ IIQEEEREKG SVALDVYWKY ITLAYGGALV PFILLGQVLF QLLQIGSNYW MAWATPVSED VQAPVKLSTL MIVYVALAFG
1001: SSLCILLRAT LLVTAGYKTA TELFHKMHHC IFRSPMSFFD STPSGRIMSR ASTDQSAVDL ELPYQFGSVA ITVIQLIGII GVMSQVSWLV FLVFIPVVAA
1101: SIWYQRYYIA AARELSRLVG VCKAPLIQHF SETISGATTI RSFSQEFRFR SDNMRLSDGY SRPKFYTAGA MEWLCFRLDM LSSLTFVFSL VFLVSIPTGV
1201: IDPSLAGLAV TYGLSLNTLQ AWLIWTLCNL ENKIISVERI LQYASVPSEP PLVIESNRPE QSWPSRGEVE IRDLQVRYAP HMPLVLRGIT CTFKGGLRTG
1301: IVGRTGSGKS TLIQTLFRIV EPSAGEIRID GVNILTIGLH DLRLRLSIIP QDPTMFEGTM RSNLDPLEEY TDDQIWEALD KCQLGDEVRK KEQKLDSSVS
1401: ENGDNWSMGQ RQLVCLGRVL LKRSKILVLD EATASVDTAT DNLIQKTLRE HFSDCTVITI AHRISSVIDS DMVLLLSNGI IEEYDTPVRL LEDKSSSFSK
1501: LVAEYTSRSS SSFD
Arabidopsis Description
ABCC3MRP3 [Source:UniProtKB/TrEMBL;Acc:A0A178VHA7]
SUBAcon: [plasma membrane,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.