Factsheet for Bra039348.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
mitochondrion 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY43395	Canola	plasma membrane	98.5	98.36
AT3G13100.1	Thale cress	plasma membrane	77.99	76.42
Bra034706.1-P	Field mustard	plasma membrane	76.83	76.31
Zm00001d048327_P001	Maize	cytosol	1.91	68.29
KRH73882	Soybean	plasma membrane	56.12	63.54
Bra001490.1-P	Field mustard	plasma membrane	62.47	61.8
Bra039368.1-P	Field mustard	plasma membrane	61.79	61.21
PGSC0003DMT400057099	Potato	endoplasmic reticulum, plasma membrane	55.09	61.06
Bra001488.1-P	Field mustard	plasma membrane, plastid	62.27	61.02
KXG31741	Sorghum	plasma membrane	51.88	60.57
VIT_19s0015g00040.t01	Wine grape	plasma membrane	44.36	60.2
TraesCS1A01G310100.1	Wheat	cytosol	30.62	59.42
KRG99624	Soybean	plasma membrane	60.01	59.01
KRG98556	Soybean	nucleus	52.36	58.88
KRH01233	Soybean	cytosol, endoplasmic reticulum, plasma membrane	52.36	58.65
KRH46626	Soybean	plasma membrane	58.51	58.59
KRH14256	Soybean	plasma membrane	59.67	58.43
KRH73881	Soybean	plasma membrane	59.6	58.41
OQU92792	Sorghum	plasma membrane	53.52	57.11
KRH46325	Soybean	plasma membrane	58.17	56.88
KRH46324	Soybean	plasma membrane	57.83	56.29
GSMUA_Achr10P...	Banana	plasma membrane	49.15	56.08
HORVU3Hr1G024210.3	Barley	vacuole	54.14	55.62
Os02t0288400-00	Rice	plasma membrane	48.67	55.37
TraesCS1D01G309600.1	Wheat	peroxisome	48.46	55.22
TraesCS1B01G321200.1	Wheat	peroxisome	48.46	55.22
TraesCS2D01G420400.1	Wheat	plasma membrane	48.19	54.95
Zm00001d008733_P001	Maize	plasma membrane	55.78	54.47
TraesCS4B01G253200.1	Wheat	plasma membrane	55.02	54.32
TraesCS4D01G253300.3	Wheat	plasma membrane	55.09	54.31
TraesCS4A01G051100.1	Wheat	plasma membrane	55.16	54.23
Zm00001d020666_P004	Maize	plasma membrane	48.8	54.21
TraesCS3A01G129000.1	Wheat	plastid	55.3	54.08
TraesCS3B01G148100.2	Wheat	plasma membrane, plastid	55.43	54.07
TraesCS3D01G129900.2	Wheat	plasma membrane	55.23	53.97
TraesCS2B01G442400.1	Wheat	plasma membrane	46.55	53.96
KRH73880	Soybean	plasma membrane	45.25	53.95
Os01t0173900-01	Rice	plasma membrane	55.37	53.82
HORVU3Hr1G085890.7	Barley	plasma membrane	53.18	52.96
TraesCS3B01G395000.2	Wheat	plasma membrane	52.97	52.79
TraesCS3D01G356300.2	Wheat	plasma membrane	53.04	52.75
KXG40096	Sorghum	plasma membrane	54.0	52.28
Zm00001d048329_P003	Maize	plasma membrane	53.73	51.74
TraesCS3A01G362500.1	Wheat	plasma membrane	50.58	51.35
Bra015291.1-P	Field mustard	plasma membrane	47.37	45.95
Bra036682.1-P	Field mustard	golgi, plasma membrane	44.57	45.31
Bra003402.1-P	Field mustard	plastid	45.86	44.91
Bra032248.1-P	Field mustard	plasma membrane, plastid	38.14	38.72
Bra007434.1-P	Field mustard	golgi, plasma membrane, plastid	37.87	38.18
Bra023893.1-P	Field mustard	plasma membrane	37.59	38.01
Bra018722.1-P	Field mustard	plasma membrane, plastid	39.3	37.88
Bra031267.1-P	Field mustard	plasma membrane	37.8	37.77
Bra007695.1-P	Field mustard	plastid	38.69	36.83
Bra014879.1-P	Field mustard	plasma membrane	30.96	29.96
Bra010773.1-P	Field mustard	plasma membrane	31.65	29.12
Bra012617.1-P	Field mustard	plasma membrane	28.16	28.81
Bra032385.1-P	Field mustard	plasma membrane	31.78	28.65
Bra005402.1-P	Field mustard	plasma membrane	31.72	28.54
Bra032386.1-P	Field mustard	plasma membrane	27.27	27.63

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EnsemblPlantsGene:Bra039348	EnsemblPlants:Bra039348.1	EnsemblPlants:Bra039348.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005773	GO:GO:0005774	GO:GO:0006810
GO:GO:0008150	GO:GO:0009605	GO:GO:0009607	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787
GO:GO:0016887	GO:GO:0042626	GO:GO:0051707	GO:GO:0055085	InterPro:IPR003439	InterPro:IPR011527
InterPro:IPR036640	UniProt:M4FE27	InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211
PFscan:PS50893	PFscan:PS50929	PANTHER:PTHR24223	PANTHER:PTHR24223:SF181	SMART:SM00382	SUPFAM:SSF52540
SUPFAM:SSF90123	TMHMM:TMhelix	UniParc:UPI000253E8C4	SEG:seg	:	:

Description

AT3G13090 (E=0.0) ATMRP8, ATABCC6 | ATMRP8; ATPase, coupled to transmembrane movement of substances

Coordinates

chrScaffold000164:+:42040..47798

Molecular Weight (calculated)

163831.0 Da

IEP (calculated)

6.423

GRAVY (calculated)

0.239

Length

1463 amino acids

Sequence
(BLAST)

0001: MSQWPMKTSV QSQRGIILVN SLPHSPMENP LDFLLIQPMY LPLLSFFLNL VLLLILFGSW VYNKKVACEN SDDFMAKRST KMSSTFSKLV VMCCVSLSVF
0101: YSVLSLLSCV RWHSNVWTLF DLLLAALTWG AISMYLRGLY TDSHEQKLPY LLRVWWVLYV LLSCYRLVVD FVLYKKQELV SVHIVVSDLV GVCAGLLLCC
0201: SCLWKQGEGE RNNLLEEPLL IENEVCDDEV TTPFSKAGFL SLVSFSWMSP LVTLGNEKII DSKDVPQVDS SDRAENLFRV FRSKLEWDDG ERRITTFKLV
0301: KALFLSVWRD ILLSFIFAFV STMSCYVAPY LMDSFVQYLN GQRQYKHQGY VLVTVFFVAK LVECQTRRHW YFRGGKAGLG MKAVLVSMIY EKGLTLPCHS
0401: KQGQGQTSGE IINLMAVDAD RLDAFTWFMH DPWILVLQVS LALWILYNSL GHGSVAAFPA FILVMLANYP FAKLEDKFQS NLMKSKDNRM KKTSEVLLNM
0501: RILKLQGWEM KFLSKILDLR HVEAGWLKKF VYNSAAMSSV LLTAPSFISA TAFGACVLLK IPLESGKILA ALAIFQILQS PIYKLPETIS MFVQVKVSLA
0601: RIASFLCLDD LRNDVVERLT YSEMALEVRN GCFSWDDSSS IPTLREVSFE VSQGMNVAVC GTVGSGKSSL LSSILGEVPK ISGTVKVYGR KAYVAQSPWI
0701: QSGKVEDNIL FGKPMERDWY ERVLEACCLN KDLELLPFHD QTVVGERGIN LSGGQKQRIQ IARALYQNAD IYLFDDPFSA VDAHTGSHLF KEVILGILKD
0801: KTVIYVTHQV EFLPEADLIL VMKEGKITQA GRYNEILDSG TDFMELVGAH TDALATDDTY EQGCGQLVQQ EEREKGKVGF TVYKKYMALA YGGAVIPIIL
0901: LVQILFQVLD IGSNYWMTWV TPVSKDVEPW VSGFTLILVY VVLAIASSLC ILVRTLLVSM TGFKMATELF TQMHLRVFRA SMSFFDVTPM GRILNRASTD
1001: QSVVDLSLPG QFAYVAVVAI NILGIMGVMI HVAWQVLIIF IPVVAASSWY RQYYISAARE LARLAGISRS PLVHHFSETL SGVTTIRSFD QEPRFLSDIM
1101: KLSDCLSRLA FHSTGATEWL CFRLELLATI AFALSLVIVV SAPDGTVNPS FAGLAITYAL NLNNLQSNLV WTLCELENKM ISVERMLQYI DIPSEPSLVI
1201: ESTRPEKSWP SHGEITISNL QVRYGPHLPM VLHGLTCTFP GGLKTGIVGR TGCGKSTRIQ TLFGIVEPTA GEIIIDGIDI LTIGLHDLRS RLSIIPQDPT
1301: MFEGTVRSNL DPLEEYSDDQ IWEALDKCQL GVEVRKKELK LDSPVSENGQ NWSVGQRQLV CLGRVLLKSS KVLVLDEATA SVDTATDNLI QETLRQHFAD
1401: CTVITIAHRI SSVIDSDMVL LLDQGLIKEH DSPARLLEDK SSSFSKLVAE YTTSSESKFS SSC

Best Arabidopsis Sequence Match ( AT3G13090.1 )
(BLAST)

0001: MENPIDSLLL QPIYLSVLSF FLNLVLLLIL FGSWLFKKRV ACEDTDAIMN EEFKHISFSY NKLVLICCVS LSVFYSVLSL LSCLHWHTNG WPFLDLLLAA
0101: LTWGSISVYL FGRYTNSCEQ KVLFLLRVWW VFFFVVSCYH LVVDFVLYKK QEMVSVHFVI SDLVGVCAGL FLCCSCLWKK GEGERIDLLK EPLLSSAESS
0201: DNEEVTAPFS KAGILSRMSF SWMSPLITLG NEKIIDIKDV PQLDRSDTTE SLFWIFRSKL EWDDGERRIT TFKLIKALFL SVWRDIVLSA LLAFVYTVSC
0301: YVAPYLMDNF VQYLNGNRQY KNQGYVLVTT FFVAKLVECQ TQRQWFFRGQ KAGLGMRSVL VSMIYEKGLT LPCHSKQGHT SGEIINLMAV DADRISAFSW
0401: FMHDPWILVL QVSLALWILY KSLGLGSIAA FPATILVMLA NYPFAKLEEK FQSSLMKSKD NRMKKTSEVL LNMKILKLQG WEMKFLSKIL ELRHIEAGWL
0501: KKFVYNSSAI NSVLWAAPSF ISATAFGACL LLKIPLESGK ILAALATFRI LQGPIYKLPE TISMIVQTKV SLNRIASFLC LDDLQQDVVG RLPSGSSEMA
0601: VEISNGTFSW DDSSPIPTLR DMNFKVSQGM NVAICGTVGS GKSSLLSSIL GEVPKISGNL KVCGRKAYIA QSPWIQSGKV EENILFGKPM EREWYDRVLE
0701: ACSLNKDLEI LPFHDQTVIG ERGINLSGGQ KQRIQIARAL YQDADIYLFD DPFSAVDAHT GSHLFKEVLL GLLRHKTVIY VTHQVEFLPE ADLILVMKDG
0801: KITQAGKYHE ILDSGTDFME LVGAHTEALA TIDSCETGYA SEKSTTDKEN EVLHHKEKQE NGSDNKPSGQ LVQEEEREKG KVGFTVYKKY MALAYGGAVI
0901: PLILVVQVLF QLLSIGSNYW MTWVTPVSKD VEPPVSGFTL ILVYVLLAVA SSFCILIRAL LVAMTGFKMA TELFTQMHLR IFRASMSFFD ATPMGRILNR
1001: ASTDQSVADL RLPGQFAYVA IAAINILGII GVIVQVAWQV LIVFIPVVAA CAWYRQYYIS AARELARLAG ISRSPVVHHF SETLSGITTI RSFDQEPRFR
1101: GDIMRLSDCY SRLKFHSTGA MEWLCFRLEL LSTFAFASSL VILVSAPEGV INPSLAGLAI TYALNLNTLQ ATLIWTLCDL ENKMISVERM LQYTNIPSEP
1201: PLVIETTRPE KSWPSRGEIT ICNLQVRYGP HLPMVLHGLT CTFPGGLKTG IVGRTGCGKS TLIQTLFRIV EPAAGEIRID GINILSIGLH DLRSRLSIIP
1301: QDPTMFEGTI RSNLDPLEEY TDDQIWEALD NCQLGDEVRK KELKLDSPVS ENGQNWSVGQ RQLVCLGRVL LKRSKLLVLD EATASIDTAT DNLIQETLRH
1401: HFADCTVITI AHRISSVIDS DMVLLLDQGL IKEHDSPARL LEDRSSLFSK LVAEYTTSSE SKSKRS

Arabidopsis Description

ABCC6ABC transporter C family member 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8VZZ4]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.