Factsheet for Bra032385.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
golgi 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY02289	Canola	plasma membrane	99.45	99.45
Bra010773.1-P	Field mustard	plasma membrane	92.73	94.65
Bra005402.1-P	Field mustard	plasma membrane	86.08	85.92
KRH11151	Soybean	plasma membrane	74.43	74.57
KRH21096	Soybean	endoplasmic reticulum	74.31	74.44
Solyc08g006880.2.1	Tomato	nucleus	74.37	74.23
EES12878	Sorghum	plasma membrane	72.58	72.4
Zm00001d002275_P029	Maize	plasma membrane	72.09	71.82
HORVU2Hr1G103620.1	Barley	plasma membrane	71.78	71.56
GSMUA_Achr8P33250_001	Banana	endoplasmic reticulum, golgi, plastid	56.19	71.47
Os04t0620000-01	Rice	plasma membrane	71.23	71.05
TraesCS1A01G404300.1	Wheat	plasma membrane	67.9	68.58
Bra014879.1-P	Field mustard	plasma membrane	62.97	67.59
GSMUA_Achr7P03410_001	Banana	endoplasmic reticulum, plasma membrane, plastid	57.12	63.71
Bra032386.1-P	Field mustard	plasma membrane	53.73	60.39
Bra032248.1-P	Field mustard	plasma membrane, plastid	28.84	32.48
Bra036682.1-P	Field mustard	golgi, plasma membrane	28.53	32.18
Bra039368.1-P	Field mustard	plasma membrane	29.14	32.02
Bra015291.1-P	Field mustard	plasma membrane	29.64	31.9
Bra039348.1-P	Field mustard	plasma membrane	28.65	31.78
Bra001490.1-P	Field mustard	plasma membrane	28.53	31.3
Bra018722.1-P	Field mustard	plasma membrane, plastid	29.14	31.16
Bra007695.1-P	Field mustard	plastid	29.39	31.03
Bra023893.1-P	Field mustard	plasma membrane	27.66	31.03
Bra003402.1-P	Field mustard	plastid	28.53	30.99
Bra034706.1-P	Field mustard	plasma membrane	28.1	30.96
Bra001488.1-P	Field mustard	plasma membrane, plastid	28.47	30.94
Bra012617.1-P	Field mustard	plasma membrane	27.17	30.84
Bra007434.1-P	Field mustard	golgi, plasma membrane, plastid	27.3	30.53
Bra031267.1-P	Field mustard	plasma membrane	27.11	30.05

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EnsemblPlantsGene:Bra032385	EnsemblPlants:Bra032385.1	EnsemblPlants:Bra032385.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640	UniProt:M4EUA3
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929
PANTHER:PTHR24223	PANTHER:PTHR24223:SF251	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix
UniParc:UPI0002542561	SEG:seg	:	:	:	:

Description

AT1G30400 (E=0.0) ATMRP1, EST1, ATABCC1, MRP1 | MRP1 (ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 1); ATPase, coupled to transmembrane movement of substances / xenobiotic-transporting ATPase

Coordinates

chrA09:-:21857408..21866532

Molecular Weight (calculated)

182291.0 Da

IEP (calculated)

6.532

GRAVY (calculated)

0.038

Length

1623 amino acids

Sequence
(BLAST)

0001: MGFKPLDWYC KPVPNGVWSK MVDYAFGAYT PCAIDSFVLG ISHLALLILC LYRIWLTVKD HKVEKFCLRS KLYNYFLALL AAYSTAEPLF RLVMRISLLD
0101: LDAAGFPPYE AFMLVLEAFA WGSALVMTVF ETKTYIHELR WYVRFAVVYA LVGDMVLLNL VLSVKEYYGS FKLYLYISEV AVQVAFGTLL FVYFPNLDPY
0201: AGYTPVPAET SEDYEYEELP GGEQICPERH ANLFDRIFFS WLNPLMTLGS KRPLTEKDVW HLDTWDRTET LMKSFQMSWE KELEKPKPWL LRALNNSLGG
0301: RFWWGGFWKI GNDCSQFVGP LLLNELLKSM QLNEPAWIGY IYAISIFVGV VLGVLCEAQY FQNVMRVGYR LRSALIAAVF RKSLRLTNEG RKKFQTGKIT
0401: NLMTTDAESL QQICQSLHTM WSAPFRIIVS LVLLYQQLGV ASLIGALFLV LMFPIQTVII SKTQKLTKEG LQRTDKRIGL MNEVLAAMDT VKCYAWENSF
0501: QSKVQTVRDD ELSWFRKAQL LSAFNMFILN SIPVFVTVVS FGVFSLLGGD LTPARAFTAL SLFSVLRFPL FMLPNIITQA VNAKVSLTRL EEVLSTEERV
0601: LLPNPPIEPG QPAISIRNGY FSWDSKAERP TLLNINLDVP VGSLVAVVGS TGEGKTSLIS AMLGELPAIS DAIVTLRGSV AYVPQVSWIF NATVRDNILF
0701: GAPFDKEKYE RVIDVTALRH DLELLPGGDL TEIGERGVNI SGGQKQRVSM ARAVYSNSDV CILDDPLSAL DAHVGQQVFE KCIKRELADK TRVLVTNQLH
0801: FLSQVDKILL VHEGTVKEEG TYEELSHSGP LFQRLMENAG KVEEYSEENE EAGADQKSVK QVENGNTNNP QMEGTESKKS KEGNSVLVKR EERETGVVSW
0901: KVLKRYQDAL GGGWVVMMLL ICYVLTQVFR VASSTWLSEW TDAGTPKSHG PLFYNLIYAI LSFGQVFVTL VNSYWLIMAS LYAAKKMHDA MLGSILRAPM
1001: VFFQTNPLGR IINRFAKDMG DIDRTVAVFV NMFMGSIAQL LSTIILIGIV STLSLWAIMP LLVVFYGAYL YYQNTSREVK RMDSVSRSPV YAQFGEALNG
1101: LSSIRAYKAY DRMAEINGRS MDNNIRFTLV NMGANRWLGI RLEVLGGLMV WLTASLAVMQ NGKAENQQAF ASTMGLLLSY ALSITSSLTA VLRLASLAEN
1201: SLNSVERVGN YIETPSEAPL VIENNRPPPG WPSSGSIKFQ DVVLRYRPEL PPVLHEVSFF ISPMDKVGIV GRTGAGKSSL LNALFRIVEL EKGRILIDEC
1301: DIGKFGLMDL RKVLGIMPQA PVLFSGTVRF NLDPFSEHND ADLWESLERA HLKDTIRRNP LGLDAEVTEA GENFSVGQRQ LLSLARALLR RSKILVLDEA
1401: TAAVDVRTDV LIQKTIREEF KSCTMLIIAH RLNTIIDCDK VLVLDSGKVQ EFSTPENLLS NGESSFSKMV QSTGPANAEY LRGIVLENKR IREANGDDSS
1501: QPLEGQRKWQ ASSRWAAAAQ FALAVSLTSS HNDLQSLEIQ DDNSILKRTK DAVVTLRSVL EGKHDKEIDE SLTQNDISRE RWWPSLYKMV EGLAVMSRLA
1601: KNRMQHSEYS LEGRSFDWDN VEM

Best Arabidopsis Sequence Match ( AT1G30400.2 )
(BLAST)

0001: MGFEPLDWYC KPVPNGVWTK TVDYAFGAYT PCAIDSFVLG ISHLVLLILC LYRLWLITKD HKVDKFCLRS KWFSYFLALL AAYATAEPLF RLVMRISVLD
0101: LDGAGFPPYE AFMLVLEAFA WGSALVMTVV ETKTYIHELR WYVRFAVIYA LVGDMVLLNL VLSVKEYYGS FKLYLYISEV AVQVAFGTLL FVYFPNLDPY
0201: PGYTPVGTEN SEDYEYEELP GGENICPERH ANLFDSIFFS WLNPLMTLGS KRPLTEKDVW HLDTWDKTET LMRSFQKSWD KELEKPKPWL LRALNNSLGG
0301: RFWWGGFWKI GNDCSQFVGP LLLNELLKSM QLNEPAWIGY IYAISIFVGV VLGVLCEAQY FQNVMRVGYR LRSALIAAVF RKSLRLTNEG RKKFQTGKIT
0401: NLMTTDAESL QQICQSLHTM WSAPFRIIVA LVLLYQQLGV ASIIGALFLV LMFPIQTVII SKTQKLTKEG LQRTDKRIGL MNEVLAAMDT VKCYAWENSF
0501: QSKVQTVRDD ELSWFRKAQL LSAFNMFILN SIPVLVTVVS FGVFSLLGGD LTPARAFTSL SLFSVLRFPL FMLPNIITQM VNANVSLNRL EEVLSTEERV
0601: LLPNPPIEPG QPAISIRNGY FSWDSKADRP TLSNINLDIP LGSLVAVVGS TGEGKTSLIS AMLGELPARS DATVTLRGSV AYVPQVSWIF NATVRDNILF
0701: GAPFDQEKYE RVIDVTALQH DLELLPGGDL TEIGERGVNI SGGQKQRVSM ARAVYSNSDV CILDDPLSAL DAHVGQQVFE KCIKRELGQT TRVLVTNQLH
0801: FLSQVDKILL VHEGTVKEEG TYEELCHSGP LFQRLMENAG KVEDYSEENG EAEVDQTSVK PVENGNANNL QKDGIETKNS KEGNSVLVKR EERETGVVSW
0901: KVLERYQNAL GGAWVVMMLV ICYVLTQVFR VSSSTWLSEW TDSGTPKTHG PLFYNIVYAL LSFGQVSVTL INSYWLIMSS LYAAKKMHDA MLGSILRAPM
1001: VFFQTNPLGR IINRFAKDMG DIDRTVAVFV NMFMGSIAQL LSTVILIGIV STLSLWAIMP LLVVFYGAYL YYQNTSREIK RMDSTTRSPV YAQFGEALNG
1101: LSSIRAYKAY DRMAEINGRS MDNNIRFTLV NMAANRWLGI RLEVLGGLMV WLTASLAVMQ NGKAANQQAY ASTMGLLLSY ALSITSSLTA VLRLASLAEN
1201: SLNSVERVGN YIEIPSEAPL VIENNRPPPG WPSSGSIKFE DVVLRYRPEL PPVLHGVSFL ISPMDKVGIV GRTGAGKSSL LNALFRIVEL EKGRILIDEC
1301: DIGRFGLMDL RKVLGIIPQA PVLFSGTVRF NLDPFSEHND ADLWESLERA HLKDTIRRNP LGLDAEVTEA GENFSVGQRQ LLSLARALLR RSKILVLDEA
1401: TAAVDVRTDV LIQKTIREEF KSCTMLIIAH RLNTIIDCDK VLVLDSGKVQ EFSSPENLLS NGESSFSKMV QSTGTANAEY LRSITLENKR TREANGDDSQ
1501: PLEGQRKWQA SSRWAAAAQF ALAVSLTSSH NDLQSLEIED DNSILKKTKD AVVTLRSVLE GKHDKEIEDS LNQSDISRER WWPSLYKMVE GLAVMSRLAR
1601: NRMQHPDYNL EGKSFDWDNV EM

Arabidopsis Description

ABCC1ABC transporter C family member 1 [Source:UniProtKB/Swiss-Prot;Acc:Q9C8G9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.