Factsheet for Bra032248.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid

Predictor Summary:

plastid 5
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plasma membrane
Predotar:	plastid
PProwler:	secretory
TargetP:	plastid
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY23680	Canola	plasma membrane	92.78	99.7
Bra018722.1-P	Field mustard	plasma membrane, plastid	89.94	85.38
AT2G47800.1	Thale cress	plasma membrane	87.51	83.18
Bra007695.1-P	Field mustard	plastid	80.43	75.41
VIT_07s0005g00260.t01	Wine grape	plasma membrane	64.75	73.18
GSMUA_Achr2P02280_001	Banana	cytosol, golgi, plasma membrane	53.16	66.38
KRH31883	Soybean	plastid	68.91	66.16
KRG96433	Soybean	endoplasmic reticulum	67.04	64.23
Solyc09g075020.2.1	Tomato	plastid	67.11	63.91
PGSC0003DMT400029581	Potato	plasma membrane	67.18	63.35
TraesCS2A01G056800.1	Wheat	plasma membrane	42.19	61.29
TraesCS5A01G467600.1	Wheat	plasma membrane	61.35	58.74
KXG32483	Sorghum	plasma membrane	61.62	58.73
TraesCS5B01G479900.1	Wheat	golgi	61.28	58.59
TraesCS5D01G480600.1	Wheat	plasma membrane	61.21	58.57
Zm00001d009243_P001	Maize	mitochondrion	61.14	58.38
Os04t0209200-01	Rice	plasma membrane	51.77	58.37
Os01t0356400-01	Rice	plasma membrane	59.13	55.8
HORVU2Hr1G009680.2	Barley	plastid	41.5	53.97
TraesCS2B01G069000.2	Wheat	plastid	54.41	51.21
EES10452	Sorghum	plastid	54.34	50.55
Zm00001d004361_P001	Maize	plasma membrane	53.85	50.52
Os04t0209300-01	Rice	plasma membrane	52.19	49.74
TraesCS2A01G056900.1	Wheat	plasma membrane, plastid	50.66	49.09
TraesCSU01G014100.1	Wheat	plasma membrane	51.15	49.0
TraesCS2A01G057100.1	Wheat	plasma membrane	50.66	48.6
Zm00001d025043_P004	Maize	plasma membrane, plastid	50.94	48.16
HORVU2Hr1G009580.3	Barley	plastid	46.22	45.09
Bra001490.1-P	Field mustard	plasma membrane	40.11	39.08
Bra015291.1-P	Field mustard	plasma membrane	40.46	38.66
Bra001488.1-P	Field mustard	plasma membrane, plastid	40.04	38.65
Bra039368.1-P	Field mustard	plasma membrane	39.42	38.46
Bra039348.1-P	Field mustard	plasma membrane	38.72	38.14
Bra036682.1-P	Field mustard	golgi, plasma membrane	37.68	37.73
Bra003402.1-P	Field mustard	plastid	38.79	37.42
Bra034706.1-P	Field mustard	plasma membrane	37.82	37.0
Bra031267.1-P	Field mustard	plasma membrane	37.06	36.48
Bra023893.1-P	Field mustard	plasma membrane	36.5	36.35
Bra007434.1-P	Field mustard	golgi, plasma membrane, plastid	35.95	35.7
Bra014879.1-P	Field mustard	plasma membrane	31.64	30.16
Bra010773.1-P	Field mustard	plasma membrane	32.55	29.5
Bra032385.1-P	Field mustard	plasma membrane	32.48	28.84
Bra005402.1-P	Field mustard	plasma membrane	32.41	28.72
Bra032386.1-P	Field mustard	plasma membrane	27.27	27.22
Bra012617.1-P	Field mustard	plasma membrane	27.0	27.2

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	EnsemblPlantsGene:Bra032248	EnsemblPlants:Bra032248.1	EnsemblPlants:Bra032248.1-P	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0005215	GO:GO:0005488	GO:GO:0005524	GO:GO:0005575
GO:GO:0006810	GO:GO:0008150	GO:GO:0016020	GO:GO:0016021	GO:GO:0016787	GO:GO:0016887
GO:GO:0042626	GO:GO:0055085	InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640	UniProt:M4ETW6
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929
PANTHER:PTHR24223	PANTHER:PTHR24223:SF215	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix
UniParc:UPI0002547CB3	SEG:seg	:	:	:	:

Description

AT2G47800 (E=0.0) ATMRP4, EST3 | ATMRP4 (ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 4); ATPase, coupled to transmembrane movement of substances / folic acid transporter

Coordinates

chrA05:+:12374300..12379365

Molecular Weight (calculated)

161264.0 Da

IEP (calculated)

7.818

GRAVY (calculated)

0.179

Length

1441 amino acids

Sequence
(BLAST)

0001: MAEICFPLSV PSTCSLLRRR SFIRGRPCLV RPWEALFFVF FLNLSQRRKP LLGRIQTRTT AWFKSTVVAT VLLSVCSVVV CVLAFTEKQR TQRPCNVINP
0101: MFWLIHAVTN AVTAVLVLHE KRFAALKHPL SLRVYWVSSF VVTTLFTVSG ILHVLSDDST AAVLKAEDVA SFFSFPLTAF LLIASVLGST GVVTTEGNNN
0201: NYSYKSPLTL EQVPTLSPEH KAERLALLFE SNWPKPSDNS RSHPVGTTIL RCFWKEILFT AILAVVRLGV MYVGPVLIQS FVDFTSGKRS SPWQGYYLVL
0301: ILLVAKFVEV LTTHHFNFSS QKLGMLIRST LITALYKKGL KITSSARQSH GVGQIVNYMA VDAQQLSDMM LQLHAIWLMP LQVALALVLL YGSLGPSVVT
0401: AIIGLTGVFV FVLLGTKRNN RYQFSLMGNR DSRMKATNEM LNYMRVIKFQ AWENHFNKRI LGFRDLEFGW LSKFLYSIAA NIIVLWSTPV LISALTFATA
0501: LFLGVKLDAG AVFTTPTIFK ILQEPIRTFP QSMISLSQAM ISLGRLDSYM MSRELSSDEA VGCDGNIAVE VRDGSFSWDD EDNVPALKDI NFKVNKGELT
0601: AIVGTVGSGK SSLLASVLGE MHRITGQVSV CGSTGYVAQT SWIQNGTVLD NILFGLPMDR DKYNQVLNVC CLEKDLEMME FGDQTEIGER GINLSGGQKQ
0701: RIQLARAVYQ DCDVYFLDDV FSAVDAHTGS DIFKNCVRGV LKGKTVLLVT HQVDFLHNVD CILVMREGKI VESGRYDELV SSGLDFGELV AAHETSMELV
0801: EAGAESSAAA TSIITSPRAP TSPRVSSPRT SMESPHLSDL NEEHVKSFLR SKLIKEEERE TGQVSLRVYK QYCTEAYGWW GIVFLVFFSL TWQGSVMASD
0901: YWLAYETSAN NAVSFDASVF IRVYVIIALV SIVLVSLRSY YVTHLGLKTA QIFFRQILNS ILHAPMSFFD TTPSGRILSR ASTDQTNVDI FIPFMLGLVA
1001: SMYTTLLSIF IVTCQYAWPT IFFVIPLGWL NIWYRNYYLA SSRELTRLDS ITKAPVIHHF SESIAGVMTI RSFRKHELFR QENVKRVNDN LRMDFHNNGS
1101: NEWLGFRLEL IGSWVLCISA LFMVMLPSNV IKPENVGLSL SYGLSLNSVL FWAIYMSCFV ENKMVSVERI KQFTDIPAEA EWESKENLPP SNWPFHGNVH
1201: LEDLKVRYRP NTPLVLKGIT LDIKGGEKVG VVGRTGSGKS TLIQVLFRLV EPSGGRIIID GIDICNLGLH DLRSRFGIIP QEPVLFEGTV RSNIDPTDQY
1301: SDEEIWKSLE RCQLKDVVAT KPEKLDSLVV DSGENWSVGQ RQLLCLGRVM LKRSRLLFLD EATASVDSQT DAVIQKIIRE DFESCTIVSI AHRIPTVMDC
1401: DRVLVIDAGK AKEFDSPTRL LESHSLFAAL VQEYALRSSG I

Best Arabidopsis Sequence Match ( AT2G47800.1 )
(BLAST)

0001: MWLLSSSPWL SELSCSYSAV VEHTSSVPVP IQWLRFVLLS PCPQRALFSA VDFIFLLCFA LHKLFSSPSS SSEINGHAEI RKPLIGIRGR TPTRTTAWFK
0101: TTVAVTVLLS FCSVVLCVLA FTGKRRTQRP WNLIDPLFWL IHAVTHLVIA VLVLHQKRFA ALNHPLSLRI YWISSFVLTS LFAVTGIFHF LSDAATSLRA
0201: EDVASFFSFP LTAFLLIASV RGITGLVTAE TNSPTKPSDA VSVEKSDNVS LYASASVFSK TFWLWMNPLL SKGYKSPLTL EQVPTLSPEH KAERLALLFE
0301: SSWPKPSENS SHPIRTTLLR CFWKEILFTA ILAIVRLGVM YVGPVLIQSF VDFTSGKRSS PWQGYYLVLI LLVAKFVEVL TTHQFNFDSQ KLGMLIRSTL
0401: ITALYKKGLK LTGSARQNHG VGQIVNYMAV DAQQLSDMML QLHAIWLMPL QVTVALVLLY GSLGASVITA VIGLTGVFVF ILLGTQRNNG YQFSLMGNRD
0501: SRMKATNEML NYMRVIKFQA WENHFNKRIL KFRDMEFGWL SKFLYSIAGN IIVLWSTPVL ISALTFATAL ALGVKLDAGT VFTTTTIFKI LQEPIRTFPQ
0601: SMISLSQAMI SLGRLDSYMM SKELSEDAVE RALGCDGNTA VEVRDGSFSW DDEDNEPALS DINFKVKKGE LTAIVGTVGS GKSSLLASVL GEMHRISGQV
0701: RVCGSTGYVA QTSWIENGTV QDNILFGLPM VREKYNKVLN VCSLEKDLQM MEFGDKTEIG ERGINLSGGQ KQRIQLARAV YQECDVYLLD DVFSAVDAHT
0801: GSDIFKKCVR GALKGKTVLL VTHQVDFLHN VDCILVMRDG KIVESGKYDE LVSSGLDFGE LVAAHETSME LVEAGADSAA VATSPRTPTS PHASSPRTSM
0901: ESPHLSDLND EHIKSFLGSH IVEDGSKLIK EEERETGQVS LGVYKQYCTE AYGWWGIVLV LFFSLTWQGS LMASDYWLAY ETSAKNAISF DASVFILGYV
1001: IIALVSIVLV SIRSYYVTHL GLKTAQIFFR QILNSILHAP MSFFDTTPSG RILSRASTDQ TNVDILIPFM LGLVVSMYTT LLSIFIVTCQ YAWPTAFFVI
1101: PLGWLNIWYR NYYLASSREL TRMDSITKAP IIHHFSESIA GVMTIRSFRK QELFRQENVK RVNDNLRMDF HNNGSNEWLG FRLELVGSWV LCISALFMVL
1201: LPSNVIRPEN VGLSLSYGLS LNSVLFFAIY MSCFVENKMV SVERIKQFTD IPSESEWERK ETLPPSNWPF HGNVHLEDLK VRYRPNTPLV LKGITLDIKG
1301: GEKVGVVGRT GSGKSTLIQV LFRLVEPSGG KIIIDGIDIS TLGLHDLRSR FGIIPQEPVL FEGTVRSNID PTEQYSDEEI WKSLERCQLK DVVATKPEKL
1401: DSLVVDNGEN WSVGQRQLLC LGRVMLKRSR LLFLDEATAS VDSQTDAVIQ KIIREDFASC TIISIAHRIP TVMDGDRVLV IDAGKAKEFD SPARLLERPS
1501: LFAALVQEYA LRSAGI

Arabidopsis Description

ABCC4ABC transporter C family member 4 [Source:UniProtKB/Swiss-Prot;Acc:Q7DM58]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.