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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • endoplasmic reticulum 2
  • extracellular 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:secretory
MultiLoc:endoplasmic reticulum
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
mitochondrion: 27297264
msms PMID: 27297264 doi
D Dahal, KJ Newton, BP Mooney
Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG32483 Sorghum plasma membrane 94.83 94.64
TraesCS5A01G467600.1 Wheat plasma membrane 83.23 83.46
TraesCS5B01G479900.1 Wheat golgi 83.23 83.34
TraesCS5D01G480600.1 Wheat plasma membrane 83.04 83.2
Os01t0356400-01 Rice plasma membrane 78.26 77.34
GSMUA_Achr2P02280_001 Banana cytosol, golgi, plasma membrane 54.87 71.75
VIT_07s0005g00260.t01 Wine grape plasma membrane 57.72 68.31
CDY23680 Canola plasma membrane 57.12 64.28
CDX76656 Canola plasma membrane, plastid 61.1 62.34
KRH31883 Soybean plastid 61.76 62.09
CDY11440 Canola plastid 60.77 61.75
CDY43277 Canola plastid 60.84 61.28
Bra032248.1-P Field mustard plasma membrane, plastid 58.38 61.14
Solyc09g075020.2.1 Tomato plastid 60.84 60.67
Bra018722.1-P Field mustard plasma membrane, plastid 61.03 60.67
CDX93660 Canola plastid 60.9 60.54
KRG96433 Soybean endoplasmic reticulum 60.3 60.51
AT2G47800.1 Thale cress plasma membrane 60.77 60.49
PGSC0003DMT400016069 Potato endoplasmic reticulum, plasma membrane 54.87 60.35
PGSC0003DMT400029581 Potato plasma membrane 61.03 60.27
Bra007695.1-P Field mustard plastid 61.17 60.05
AT3G62700.1 Thale cress plasma membrane 61.1 59.91
Zm00001d004361_P001 Maize plasma membrane 59.71 58.66
Solyc01g080640.2.1 Tomato plastid 57.26 57.68
KRH12057 Soybean endoplasmic reticulum 56.93 57.23
KRH37107 Soybean endoplasmic reticulum 56.86 56.97
Zm00001d025043_P004 Maize plasma membrane, plastid 55.93 55.38
Zm00001d048327_P001 Maize cytosol 1.33 48.78
Zm00001d045279_P001 Maize plasma membrane 13.32 43.89
Zm00001d020666_P004 Maize plasma membrane 34.79 39.86
Zm00001d027625_P001 Maize plasma membrane 39.16 39.58
Zm00001d008733_P001 Maize plasma membrane 38.77 39.05
Zm00001d045269_P004 Maize plasma membrane 36.85 37.57
Zm00001d031447_P003 Maize plastid 37.24 37.57
Zm00001d048329_P003 Maize plasma membrane 37.04 36.8
Zm00001d002503_P001 Maize plasma membrane 37.11 36.36
Zm00001d026041_P005 Maize plasma membrane 30.55 34.51
Zm00001d002275_P029 Maize plasma membrane 30.62 28.36
Zm00001d045097_P001 Maize plasma membrane 27.24 28.07
Protein Annotations
Gene3D:1.20.1560.10EntrezGene:103635154MapMan:24.1.3.1.2Gene3D:3.40.50.300InterPro:AAA+_ATPaseInterPro:ABC1_TM_dom
InterPro:ABC1_TM_sfInterPro:ABC_transporter-likeInterPro:ABC_transporter_CSProteinID:AQK91544.1GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0005215GO:GO:0005488GO:GO:0005524GO:GO:0005575GO:GO:0006810
GO:GO:0008150GO:GO:0016020GO:GO:0016021GO:GO:0016787GO:GO:0016887GO:GO:0042626
GO:GO:0055085InterPro:IPR003439InterPro:IPR011527InterPro:IPR036640UniProt:K7VCA6InterPro:P-loop_NTPase
PFAM:PF00005PFAM:PF00664ScanProsite:PS00211PFscan:PS50893PFscan:PS50929PANTHER:PTHR24223
PANTHER:PTHR24223:SF215SMART:SM00382SUPFAM:SSF52540SUPFAM:SSF90123TMHMM:TMhelixUniParc:UPI0002220402
EnsemblPlantsGene:Zm00001d009243EnsemblPlants:Zm00001d009243_P001EnsemblPlants:Zm00001d009243_T001SEG:seg::
Description
multidrug resistance associated protein6ABC transporter C family member 4
Coordinates
chr8:-:46518330..46532634
Molecular Weight (calculated)
165762.0 Da
IEP (calculated)
7.429
GRAVY (calculated)
0.206
Length
1509 amino acids
Sequence
(BLAST)
0001: MALASQPPWW LTTEACDLPS APAAGLGEWV AFLFLSTCSQ QMLLSAASAV FLVALLCLGA AKLISTRRRR HGGGALNGDK QPLLDRAGGR AGVRVGAGFV
0101: VALAASGVLA AFYASLLVLS LVNRGGGEGE ALEAVFLALQ CAAHLAAAAV VAHEKRFRAA AHPLALRLYW LAAPALTALL AGTSVARLVV AAARLPDDAL
0201: AIAALVLSLP LPVLSILGST GISVAVVNDA TGAAEEETAS NKATEKNVTP YATASWASRA TWAWMNPLVQ RGHRAALELS DVPTLAPSHR PERMHELFTL
0301: HWPSAWASKD NNPVRHTLFR TFWAQFLLNA LLALLRLTVM YVGPTLIQSF VDFTSAGGQR PFGEGARLVA TLLAAKCAEA LCSHQYNFHC QKLGMQIRGA
0401: LIVALYRKGL RLSCSARQKH GLGMIVNYMA VDAQQLSDMM LQIHYLWLMP LQVGVALGLL YTYLGPPVTS ALIGVAGVMV FVLLGTRRNN RYQFSLMKER
0501: DQRMKATNEM LNYMRVIKFQ AWEEHFNARI GRFRRLEFGW LSRFMYSISG NIIALWSAPV VVSALVFATC VLAGVRLDAG LVFTATSFFK ILQEPMRNFP
0601: QAMIQASQAM ISLQRLDSYM TSAELDEGSV ERDPAAASGG MAVQVKDGVF AWDDEVDAGQ EVLRGIDLDI RTGALAAVVG MVGSGKSSLL GCILGEMRKF
0701: SGKVKVCGST AYVAQTAWIQ NGTIEENILF GKPMHRERYK EVIRVCCLEK DLEMMEFGDQ TEIGERGINL SGGQKQRIQL ARAVYQDFNI YLLDDVFSAV
0801: DAHTGTEIFK ECVRGALKNK TIVLVTHQVD FLHNADIIYV MKDGMIVQSG KYDELLQAGT DFAALVAAHD SSMELVESAA PASERELPLS RQPSSKNAAS
0901: NGDSSSSSIV APKAEKASAR LIKDEERASG HVSFTVYKQY MTEAWGWWGP LVVVAVSVVW QCSLMASDYW LADQTSDGNE TSFQPSLFIN VYAIIAAVSV
1001: VLVAARSFIV AFIGLQTADR FFKQILNSIL HAPMSFFDTT PSGRILSRAS SDQTNVDLFL PFFVWMSVSM YITVISVLIV TCQVAWPSVI AIIPLVILNI
1101: WYRGYYLSTS RELTRLESIT KAPVIHHFSE TVQGVMTIRC FRKEENFLQE NLNRVNSSLR MDFHNNGANE WLGFRLELIG SFVLCFTAVL MVTLPSNFVK
1201: PEYVGLSLSY GLSLNQVLFW AIWISCFIEN KMVSVERIKQ FTNIPSEATW RIKDCLPDSN WPTKGDINVI DLKFRYRHNT PLVLKGITIS IHGGEKIGVV
1301: GRTGSGKSTL IQALFRIVEP SEGRIIIDGV DICTLGLHDL RSRFGIIPQE PVLFEGTIRS NIDPLEQYSD DEIWQALGRC QLKEAVASKP EKLDASVVDN
1401: GENWSVGQRQ LLCLGRVMLK HSRILFMDEA TASVDSQTDA VIQKIIREDF AACTIISIAH RIPTVMDCDR VLVIDAGLAK EFDRPANLIE RPSLFGALVQ
1501: EYANRSSDV
Best Arabidopsis Sequence Match ( AT3G62700.1 )
(BLAST)
0001: MRWLSSTWLS DLSCSSSSVI EPSSSLPAPI QWLRFILLSP CPQRLLSSTV DVLFLLILFF FAIQKLCSSS SSRTNGEADI TKPLLGRRTR TRTTGLFKTT
0101: VVVTIVLSFC SLVLCVSAFF TTRTKLKLVD TLFWLIHAVT NVVIAVLVLH LKRFASPSHP LTLRIYWVFN FVVTTLFTVS GILHLLSDDP AAASLRADDV
0201: ASFISFPLTA VLLLVSIKGS TGVVVTTSNV TAPAKSNDVV VEKSENVSLY ASASFISKTF WLWMNPLLRK GYKSPLNLDQ VPTLSPEHRA EKLATLFESK
0301: WPKPQENSRN PVRTTLIRCF WKEIAFTAVL AIIRLSVIYV GPVLIQSFVD FTSGKRSSPS QGYYLVLILL IAKFVEVLST HQFNFNSQKL GMLIRSTLIT
0401: ALYKKGLKLT GSARQNHGVG QIVNYMAVDA QQLSDMMLQL HAIWLMPLQV AAAIVLLYNT LGPSVVTTVI GLTGIFVFIL LGTKRNNRYQ FSLMMNRDSR
0501: MKATNEMLNY MRVIKFQAWE DHFNERILKF REMEFGWLSK FLYSIAGNII VLWSTPVLIS ALTFTTAVFL GVKLDAGTVF TTTTIFKILQ EPIRTFPQSM
0601: ISLSQAMISL GRLDAYMMSR ELSEETVERS QGCDGNVAVE IKDGSFSWDD EDDEPAIENI NFEVKKGELA AIVGTVGSGK SSLLASVLGE MHKLSGKVRV
0701: CGTTAYVAQT SWIQNGTVQD NILFGLPMNR SKYNEVLKVC CLEKDMQIME FGDQTEIGER GINLSGGQKQ RIQLARAVYQ ESDVYLLDDV FSAVDAHTGS
0801: DIFKKCVRGA LKGKTILLVT HQVDFLHNVD RILVMRDGMI VQSGKYDELV SSGLDFGELV AAHETSMELV EAGSASATAA NVPMASPITQ RSISIESPRQ
0901: PKSPKVHRTT SMESPRVLRT TSMESPRLSE LNDESIKSFL GSNIPEDGSR LIKEEEREVG QVSFQVYKLY STEAYGWWGM ILVVFFSVAW QASLMASDYW
1001: LAYETSAKNE VSFDATVFIR VYVIIAAVSI VLVCLRAFYV THLGLKTAQI FFKQILNSLV HAPMSFFDTT PSGRILSRAS TDQTNVDIFI PFMIGLVATM
1101: YTTLLSIFIV TCQYAWPTVF FIIPLGWLNI WYRGYYLASS RELTRLDSIT KAPVIHHFSE SIAGVMTIRA FKKQPMFRQE NVKRVNANLR MDFHNNGSNE
1201: WLGFRLELIG SWVLCISALF MVMLPSNIIK PENVGLSLSY GLSLNGVLFW AIYLSCFIEN KMVSVERIKQ FTDIPAEAKW EIKESRPPPN WPYKGNIRLE
1301: DVKVRYRPNT PLVLKGLTID IKGGEKIGVV GRTGSGKSTL IQVLFRLVEP SGGKIIIDGI DICTLGLHDL RSRFGIIPQE PVLFEGTVRS NIDPTEKYSD
1401: EEIWKSLERC QLKDVVASKP EKLDSLVADN GENWSVGQRQ LLCLGRVMLK RSRILFLDEA TASVDSQTDA MIQKIIREDF SDCTIISIAH RIPTVMDCDR
1501: VLVIDAGKAK EYDSPVRLLE RQSLFAALVQ EYALRSAGI
Arabidopsis Description
ABCC14ABC transporter C family member 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9LZJ5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.