Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- golgi 2
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 2
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_07s0005g00260.t01 | Wine grape | plasma membrane | 68.2 | 61.73 |
| TraesCS2A01G056800.1 | Wheat | plasma membrane | 50.35 | 58.57 |
| CDY23680 | Canola | plasma membrane | 66.38 | 57.12 |
| Os04t0209200-01 | Rice | plasma membrane | 62.13 | 56.1 |
| KXG32483 | Sorghum | plasma membrane | 72.27 | 55.16 |
| TraesCS5D01G480600.1 | Wheat | plasma membrane | 71.66 | 54.91 |
| TraesCS5A01G467600.1 | Wheat | plasma membrane | 71.58 | 54.88 |
| Zm00001d009243_P001 | Maize | mitochondrion | 71.75 | 54.87 |
| TraesCS5B01G479900.1 | Wheat | golgi | 71.4 | 54.68 |
| Bra032248.1-P | Field mustard | plasma membrane, plastid | 66.38 | 53.16 |
| CDX76656 | Canola | plasma membrane, plastid | 66.9 | 52.2 |
| CDY11440 | Canola | plastid | 67.16 | 52.19 |
| Solyc09g075020.2.1 | Tomato | plastid | 68.02 | 51.88 |
| PGSC0003DMT400029581 | Potato | plasma membrane | 68.63 | 51.83 |
| CDY43277 | Canola | plastid | 66.98 | 51.6 |
| KRH31883 | Soybean | plastid | 66.72 | 51.3 |
| Os01t0356400-01 | Rice | plasma membrane | 67.85 | 51.28 |
| CDX93660 | Canola | plastid | 67.42 | 51.25 |
| Bra018722.1-P | Field mustard | plasma membrane, plastid | 67.42 | 51.25 |
| AT2G47800.1 | Thale cress | plasma membrane | 67.16 | 51.12 |
| KRG96433 | Soybean | endoplasmic reticulum | 66.46 | 51.0 |
| AT3G62700.1 | Thale cress | plasma membrane | 67.85 | 50.88 |
| HORVU2Hr1G009680.2 | Barley | plastid | 48.7 | 50.72 |
| Bra007695.1-P | Field mustard | plastid | 67.16 | 50.42 |
| PGSC0003DMT400016069 | Potato | endoplasmic reticulum, plasma membrane | 59.88 | 50.36 |
| KRH12057 | Soybean | endoplasmic reticulum | 61.87 | 47.57 |
| KRH37107 | Soybean | endoplasmic reticulum | 61.35 | 47.01 |
| TraesCS2B01G069000.2 | Wheat | plastid | 61.79 | 46.57 |
| Solyc01g080640.2.1 | Tomato | plastid | 59.97 | 46.19 |
| EES10452 | Sorghum | plastid | 61.79 | 46.03 |
| Zm00001d004361_P001 | Maize | plasma membrane | 60.57 | 45.51 |
| Os04t0209300-01 | Rice | plasma membrane | 58.32 | 44.51 |
| TraesCSU01G014100.1 | Wheat | plasma membrane | 56.93 | 43.68 |
| TraesCS2A01G057100.1 | Wheat | plasma membrane | 56.85 | 43.68 |
| TraesCS2A01G056900.1 | Wheat | plasma membrane, plastid | 55.89 | 43.38 |
| HORVU2Hr1G009580.3 | Barley | plastid | 54.77 | 42.79 |
| Zm00001d025043_P004 | Maize | plasma membrane, plastid | 56.33 | 42.65 |
| GSMUA_Achr10P... | Banana | plasma membrane | 40.73 | 36.66 |
| GSMUA_Achr8P12730_001 | Banana | plasma membrane | 42.63 | 36.07 |
| GSMUA_Achr10P... | Banana | plasma membrane | 37.09 | 35.08 |
| GSMUA_Achr11P... | Banana | plasma membrane | 42.81 | 33.86 |
| GSMUA_Achr10P... | Banana | plasma membrane | 34.66 | 32.79 |
| GSMUA_Achr6P31980_001 | Banana | plasma membrane | 36.22 | 32.66 |
| GSMUA_Achr11P... | Banana | golgi | 37.0 | 31.65 |
| GSMUA_Achr5P25430_001 | Banana | plasma membrane | 34.14 | 29.56 |
| GSMUA_Achr8P33250_001 | Banana | endoplasmic reticulum, golgi, plastid | 30.16 | 27.27 |
| GSMUA_Achr7P03410_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 29.9 | 23.71 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 |
| EnsemblPlantsGene:GSMUA_Achr2G02280_001 | EnsemblPlants:GSMUA_Achr2P02280_001 | EnsemblPlants:GSMUA_Achr2T02280_001 | InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 |
| UniProt:M0S4G9 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 | PFscan:PS50893 |
| PFscan:PS50929 | PANTHER:PTHR24223 | PANTHER:PTHR24223:SF215 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 |
| TMHMM:TMhelix | UniParc:UPI0002965FB8 | SEG:seg | : | : | : |
Description
ABC transporter C family member 4 [Source:GMGC_GENE;Acc:GSMUA_Achr2G02280_001]
Coordinates
chr2:-:8137476..8144480
Molecular Weight (calculated)
129969.0 Da
IEP (calculated)
8.332
GRAVY (calculated)
0.074
Length
1154 amino acids
Sequence
(BLAST)
(BLAST)
0001: MNPLIQKGYR SPLNLNDVPS LALDHRAERM YELFRSKWPE QAVRSEHPVR ATLLRCFWPR LLLTASLSII RLFVMYVGPT LIQRFVDYTS GKRTSAYEGY
0101: YLCCILLFAK LVEVLCSHQY NFQSQKLGML IRSTLITSLY RKGLRLSCSA RQSHGVGMIV NYMAVGAALA LLYNYLGPSV TSAVIGVAAI IVFVLLGTRR
0201: NNRYQFQLMG MRDKRMKATN EMLSYMRVIK FQAWEEHFSR RINKFRDGEY GFLSKFMYSI SGNIIVLWSA PLLVSTLAVI SLERLDSFMT SGELEETAVQ
0301: RSEGSAPCSG ESTCGFGAAL WPPSWVPSDR ASPPSSHASS ARCARYPARK LWLRFVLPPP LSAARQFRPM GFISAALRHP VRRPPSLCRG TDGIRRYWFS
0401: RHITVKVCGS TAYVAQTAWI QNGTIQDNIL FGQPMNRKRY EEVIRVCCLE KDLEMMEFGD QTEIGERGIN LSGGQKQRIQ LARAVYQDCD IYLLDDVFSA
0501: VDAQTGSEIF KECIRGVLKG KTIVLVTHQV DFLHNVDLIL VMRDGAIVQS GKYDELLQPG TDFAALVAAH DSSMELVEQS SSAQDHHDHQ PAALSLEEEE
0601: RETGHVSWNV YMVYITHAWG WWGAVIVLLV AAAWQGSLLA TMVSVVLITA RSFLIAYLGL KTAQIFFRQI LNSILHAPMS FFDTTPSGRI LSRASSDQTN
0701: IDLFLPFFVG LTASMYITLL SIIIVTCQVA WPTVILILPL IWLNIWYRGY YLATSRELTR LDSITKAPVI HHFSETILGV TTIRCFRKED RFSQENLNRV
0801: NSSLRMDFHN NGSNEWLGFR LELIGSFVLC ISALLMIMLP SNFIKPEYVG LSLSYGLTLN AVLFWATWVS CFIENRMVSV ERIRQFTNIP SEAAWEIKNC
0901: LPSPNWPTHG DIEIKNLKVK YRPNTPFVLH GITVSIRGGE KIGVVGRTGS GKSTLIQALF RIVEPSEGQI IIDGVDISTL GLHDLRSRFG IIPQEPVLFE
1001: GTVRSNIDPI GLYSDDEIWQ ALERCQLKDA VSLKPEKLDA SVVDNGENWS VGQRQLLCLG RVMLKRSRIL FMDEATASVD SQTDAVIQKI IREDFSACTI
1101: ISIAHRIPTV MDCDRVLVID AGLASEFDKP SNLIERPSLF GALVQEYAHR STDL
0101: YLCCILLFAK LVEVLCSHQY NFQSQKLGML IRSTLITSLY RKGLRLSCSA RQSHGVGMIV NYMAVGAALA LLYNYLGPSV TSAVIGVAAI IVFVLLGTRR
0201: NNRYQFQLMG MRDKRMKATN EMLSYMRVIK FQAWEEHFSR RINKFRDGEY GFLSKFMYSI SGNIIVLWSA PLLVSTLAVI SLERLDSFMT SGELEETAVQ
0301: RSEGSAPCSG ESTCGFGAAL WPPSWVPSDR ASPPSSHASS ARCARYPARK LWLRFVLPPP LSAARQFRPM GFISAALRHP VRRPPSLCRG TDGIRRYWFS
0401: RHITVKVCGS TAYVAQTAWI QNGTIQDNIL FGQPMNRKRY EEVIRVCCLE KDLEMMEFGD QTEIGERGIN LSGGQKQRIQ LARAVYQDCD IYLLDDVFSA
0501: VDAQTGSEIF KECIRGVLKG KTIVLVTHQV DFLHNVDLIL VMRDGAIVQS GKYDELLQPG TDFAALVAAH DSSMELVEQS SSAQDHHDHQ PAALSLEEEE
0601: RETGHVSWNV YMVYITHAWG WWGAVIVLLV AAAWQGSLLA TMVSVVLITA RSFLIAYLGL KTAQIFFRQI LNSILHAPMS FFDTTPSGRI LSRASSDQTN
0701: IDLFLPFFVG LTASMYITLL SIIIVTCQVA WPTVILILPL IWLNIWYRGY YLATSRELTR LDSITKAPVI HHFSETILGV TTIRCFRKED RFSQENLNRV
0801: NSSLRMDFHN NGSNEWLGFR LELIGSFVLC ISALLMIMLP SNFIKPEYVG LSLSYGLTLN AVLFWATWVS CFIENRMVSV ERIRQFTNIP SEAAWEIKNC
0901: LPSPNWPTHG DIEIKNLKVK YRPNTPFVLH GITVSIRGGE KIGVVGRTGS GKSTLIQALF RIVEPSEGQI IIDGVDISTL GLHDLRSRFG IIPQEPVLFE
1001: GTVRSNIDPI GLYSDDEIWQ ALERCQLKDA VSLKPEKLDA SVVDNGENWS VGQRQLLCLG RVMLKRSRIL FMDEATASVD SQTDAVIQKI IREDFSACTI
1101: ISIAHRIPTV MDCDRVLVID AGLASEFDKP SNLIERPSLF GALVQEYAHR STDL
0001: MWLLSSSPWL SELSCSYSAV VEHTSSVPVP IQWLRFVLLS PCPQRALFSA VDFIFLLCFA LHKLFSSPSS SSEINGHAEI RKPLIGIRGR TPTRTTAWFK
0101: TTVAVTVLLS FCSVVLCVLA FTGKRRTQRP WNLIDPLFWL IHAVTHLVIA VLVLHQKRFA ALNHPLSLRI YWISSFVLTS LFAVTGIFHF LSDAATSLRA
0201: EDVASFFSFP LTAFLLIASV RGITGLVTAE TNSPTKPSDA VSVEKSDNVS LYASASVFSK TFWLWMNPLL SKGYKSPLTL EQVPTLSPEH KAERLALLFE
0301: SSWPKPSENS SHPIRTTLLR CFWKEILFTA ILAIVRLGVM YVGPVLIQSF VDFTSGKRSS PWQGYYLVLI LLVAKFVEVL TTHQFNFDSQ KLGMLIRSTL
0401: ITALYKKGLK LTGSARQNHG VGQIVNYMAV DAQQLSDMML QLHAIWLMPL QVTVALVLLY GSLGASVITA VIGLTGVFVF ILLGTQRNNG YQFSLMGNRD
0501: SRMKATNEML NYMRVIKFQA WENHFNKRIL KFRDMEFGWL SKFLYSIAGN IIVLWSTPVL ISALTFATAL ALGVKLDAGT VFTTTTIFKI LQEPIRTFPQ
0601: SMISLSQAMI SLGRLDSYMM SKELSEDAVE RALGCDGNTA VEVRDGSFSW DDEDNEPALS DINFKVKKGE LTAIVGTVGS GKSSLLASVL GEMHRISGQV
0701: RVCGSTGYVA QTSWIENGTV QDNILFGLPM VREKYNKVLN VCSLEKDLQM MEFGDKTEIG ERGINLSGGQ KQRIQLARAV YQECDVYLLD DVFSAVDAHT
0801: GSDIFKKCVR GALKGKTVLL VTHQVDFLHN VDCILVMRDG KIVESGKYDE LVSSGLDFGE LVAAHETSME LVEAGADSAA VATSPRTPTS PHASSPRTSM
0901: ESPHLSDLND EHIKSFLGSH IVEDGSKLIK EEERETGQVS LGVYKQYCTE AYGWWGIVLV LFFSLTWQGS LMASDYWLAY ETSAKNAISF DASVFILGYV
1001: IIALVSIVLV SIRSYYVTHL GLKTAQIFFR QILNSILHAP MSFFDTTPSG RILSRASTDQ TNVDILIPFM LGLVVSMYTT LLSIFIVTCQ YAWPTAFFVI
1101: PLGWLNIWYR NYYLASSREL TRMDSITKAP IIHHFSESIA GVMTIRSFRK QELFRQENVK RVNDNLRMDF HNNGSNEWLG FRLELVGSWV LCISALFMVL
1201: LPSNVIRPEN VGLSLSYGLS LNSVLFFAIY MSCFVENKMV SVERIKQFTD IPSESEWERK ETLPPSNWPF HGNVHLEDLK VRYRPNTPLV LKGITLDIKG
1301: GEKVGVVGRT GSGKSTLIQV LFRLVEPSGG KIIIDGIDIS TLGLHDLRSR FGIIPQEPVL FEGTVRSNID PTEQYSDEEI WKSLERCQLK DVVATKPEKL
1401: DSLVVDNGEN WSVGQRQLLC LGRVMLKRSR LLFLDEATAS VDSQTDAVIQ KIIREDFASC TIISIAHRIP TVMDGDRVLV IDAGKAKEFD SPARLLERPS
1501: LFAALVQEYA LRSAGI
0101: TTVAVTVLLS FCSVVLCVLA FTGKRRTQRP WNLIDPLFWL IHAVTHLVIA VLVLHQKRFA ALNHPLSLRI YWISSFVLTS LFAVTGIFHF LSDAATSLRA
0201: EDVASFFSFP LTAFLLIASV RGITGLVTAE TNSPTKPSDA VSVEKSDNVS LYASASVFSK TFWLWMNPLL SKGYKSPLTL EQVPTLSPEH KAERLALLFE
0301: SSWPKPSENS SHPIRTTLLR CFWKEILFTA ILAIVRLGVM YVGPVLIQSF VDFTSGKRSS PWQGYYLVLI LLVAKFVEVL TTHQFNFDSQ KLGMLIRSTL
0401: ITALYKKGLK LTGSARQNHG VGQIVNYMAV DAQQLSDMML QLHAIWLMPL QVTVALVLLY GSLGASVITA VIGLTGVFVF ILLGTQRNNG YQFSLMGNRD
0501: SRMKATNEML NYMRVIKFQA WENHFNKRIL KFRDMEFGWL SKFLYSIAGN IIVLWSTPVL ISALTFATAL ALGVKLDAGT VFTTTTIFKI LQEPIRTFPQ
0601: SMISLSQAMI SLGRLDSYMM SKELSEDAVE RALGCDGNTA VEVRDGSFSW DDEDNEPALS DINFKVKKGE LTAIVGTVGS GKSSLLASVL GEMHRISGQV
0701: RVCGSTGYVA QTSWIENGTV QDNILFGLPM VREKYNKVLN VCSLEKDLQM MEFGDKTEIG ERGINLSGGQ KQRIQLARAV YQECDVYLLD DVFSAVDAHT
0801: GSDIFKKCVR GALKGKTVLL VTHQVDFLHN VDCILVMRDG KIVESGKYDE LVSSGLDFGE LVAAHETSME LVEAGADSAA VATSPRTPTS PHASSPRTSM
0901: ESPHLSDLND EHIKSFLGSH IVEDGSKLIK EEERETGQVS LGVYKQYCTE AYGWWGIVLV LFFSLTWQGS LMASDYWLAY ETSAKNAISF DASVFILGYV
1001: IIALVSIVLV SIRSYYVTHL GLKTAQIFFR QILNSILHAP MSFFDTTPSG RILSRASTDQ TNVDILIPFM LGLVVSMYTT LLSIFIVTCQ YAWPTAFFVI
1101: PLGWLNIWYR NYYLASSREL TRMDSITKAP IIHHFSESIA GVMTIRSFRK QELFRQENVK RVNDNLRMDF HNNGSNEWLG FRLELVGSWV LCISALFMVL
1201: LPSNVIRPEN VGLSLSYGLS LNSVLFFAIY MSCFVENKMV SVERIKQFTD IPSESEWERK ETLPPSNWPF HGNVHLEDLK VRYRPNTPLV LKGITLDIKG
1301: GEKVGVVGRT GSGKSTLIQV LFRLVEPSGG KIIIDGIDIS TLGLHDLRSR FGIIPQEPVL FEGTVRSNID PTEQYSDEEI WKSLERCQLK DVVATKPEKL
1401: DSLVVDNGEN WSVGQRQLLC LGRVMLKRSR LLFLDEATAS VDSQTDAVIQ KIIREDFASC TIISIAHRIP TVMDGDRVLV IDAGKAKEFD SPARLLERPS
1501: LFAALVQEYA LRSAGI
Arabidopsis Description
ABCC4ABC transporter C family member 4 [Source:UniProtKB/Swiss-Prot;Acc:Q7DM58]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.