Factsheet for GSMUA_Achr10P14620_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d045279_P001	Maize	plasma membrane	25.33	67.47
TraesCS7A01G119800.1	Wheat	plasma membrane	46.8	66.63
GSMUA_Achr6P31980_001	Banana	plasma membrane	66.97	63.83
TraesCS7D01G114300.1	Wheat	endoplasmic reticulum, plasma membrane, vacuole	51.31	60.72
KRG91620	Soybean	plasma membrane	60.08	59.11
TraesCSU01G159700.1	Wheat	cytosol, peroxisome, plasma membrane	61.15	58.74
TraesCS7A01G119500.1	Wheat	cytosol, peroxisome, plasma membrane	60.66	58.27
TraesCS7D01G115900.1	Wheat	plasma membrane	61.31	57.89
TraesCSU01G093100.1	Wheat	plasma membrane	69.43	57.19
TraesCS2B01G529000.2	Wheat	plasma membrane	60.66	57.19
Os06t0158900-00	Rice	plasma membrane	69.51	57.18
TraesCS7B01G016500.1	Wheat	plasma membrane	69.34	57.12
TraesCS7D01G116300.2	Wheat	plasma membrane	69.26	57.06
CDX71911	Canola	plasma membrane	53.93	56.72
TraesCS7A01G118900.2	Wheat	plasma membrane	68.77	56.65
CDY06021	Canola	plasma membrane	53.93	56.53
OQU80926	Sorghum	plasma membrane	68.61	56.48
KXG19351	Sorghum	plasma membrane	68.69	56.47
VIT_16s0050g02480.t01	Wine grape	plasma membrane	68.44	56.42
HORVU7Hr1G024960.12	Barley	golgi	67.95	55.82
Zm00001d031447_P003	Maize	plastid	68.28	55.68
Zm00001d045269_P004	Maize	plasma membrane	67.54	55.68
KXG25638	Sorghum	plasma membrane	66.8	55.59
PGSC0003DMT400023487	Potato	plasma membrane	66.56	55.39
TraesCS4A01G227600.1	Wheat	cytosol, golgi, mitochondrion, plasma membrane	52.87	55.36
Solyc03g007530.2.1	Tomato	plasma membrane	66.23	55.08
TraesCS2D01G131000.1	Wheat	plastid	66.89	54.44
TraesCS2B01G150600.1	Wheat	plasma membrane	66.97	54.43
KRH35194	Soybean	endoplasmic reticulum, nucleus, plasma membrane	65.57	54.09
TraesCS2A01G128500.1	Wheat	plasma membrane	66.07	53.91
HORVU2Hr1G022560.5	Barley	mitochondrion	66.72	53.1
VIT_16s0050g02280.t01	Wine grape	cytosol, golgi, plasma membrane	56.15	52.49
Solyc06g036490.1.1	Tomato	plastid	51.23	52.39
AT3G59140.1	Thale cress	plasma membrane	62.3	52.31
KRH08764	Soybean	plasma membrane	63.44	52.26
VIT_02s0025g00930.t01	Wine grape	plasma membrane	60.0	52.17
Bra007434.1-P	Field mustard	golgi, plasma membrane, plastid	62.05	52.17
TraesCS7A01G119000.1	Wheat	plasma membrane	64.02	52.1
VIT_02s0025g00970.t01	Wine grape	plasma membrane	62.38	51.07
VIT_02s0025g00950.t01	Wine grape	plasma membrane	60.66	50.07
PGSC0003DMT400074333	Potato	mitochondrion	63.36	50.06
PGSC0003DMT400018927	Potato	plasma membrane	51.31	49.56
KRH08755	Soybean	plasma membrane	60.33	48.97
Solyc08g081890.2.1	Tomato	endoplasmic reticulum, nucleus, plasma membrane	57.62	47.53
GSMUA_Achr10P...	Banana	plasma membrane	43.11	43.11
GSMUA_Achr8P12730_001	Banana	plasma membrane	39.51	35.34
GSMUA_Achr10P...	Banana	plasma membrane	37.13	35.34
GSMUA_Achr2P02280_001	Banana	cytosol, golgi, plasma membrane	32.79	34.66
GSMUA_Achr11P...	Banana	plasma membrane	40.49	33.86
GSMUA_Achr11P...	Banana	golgi	34.92	31.58
GSMUA_Achr5P25430_001	Banana	plasma membrane	34.26	31.36
GSMUA_Achr8P33250_001	Banana	endoplasmic reticulum, golgi, plastid	26.8	25.63
GSMUA_Achr7P03410_001	Banana	endoplasmic reticulum, plasma membrane, plastid	25.98	21.79

Protein Annotations

Gene3D:1.20.1560.10	MapMan:24.1.3.1.2	Gene3D:3.40.50.300	InterPro:AAA+_ATPase	InterPro:ABC1_TM_dom	InterPro:ABC1_TM_sf
InterPro:ABC_transporter-like	InterPro:ABC_transporter_CS	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0005215
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0016787	GO:GO:0016887	GO:GO:0042626	GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr10G14620_001
EnsemblPlants:GSMUA_Achr10P14620_001	EnsemblPlants:GSMUA_Achr10T14620_001	InterPro:IPR003439	InterPro:IPR011527	InterPro:IPR036640	UniProt:M0RI88
InterPro:P-loop_NTPase	PFAM:PF00005	PFAM:PF00664	ScanProsite:PS00211	PFscan:PS50893	PFscan:PS50929
PANTHER:PTHR24223	PANTHER:PTHR24223:SF192	SMART:SM00382	SUPFAM:SSF52540	SUPFAM:SSF90123	TMHMM:TMhelix
UniParc:UPI000294D4E2	SEG:seg	:	:	:	:

Description

Putative ABC transporter C family member 8 [Source:GMGC_GENE;Acc:GSMUA_Achr10G14620_001]

Coordinates

chr10:+:22827853..22833920

Molecular Weight (calculated)

135710.0 Da

IEP (calculated)

6.889

GRAVY (calculated)

0.110

Length

1220 amino acids

Sequence
(BLAST)

0001: MAFCGDSASA DQDGGSFGFG ELFYSSSCMN HMFVSFVDAI LIIAFLLNFV CKVSSRSVDA RPLFGLSSSL RITAAVFNSL LGLVYLGHGL WMLVGNQRTG
0101: MDGVHPAHQW LLVLSQGFCS VLVVLIVSVR RTRFGHTFIR IWSLAASFST GFVCFSSVLA VLAEKKASFL ICVDILSLPG AVLLLLCTFK GYQADGYEAA
0201: DGSLYEPLKG ESNPSEENSD ESVTPFAKAG FFSRMSFWWL NPLMKKGYQR PLEEKDIPQL GKVDRAETCY LLFLEQLNRQ KERRQTSSPS ILWAIVFKHE
0301: GYVLAFGMFL AKCLESLSQR QWYFRTRRIG LQVRSLLSAA IYQKQIGEFP FWFHQTWTTS LQLCIALVIE GLRETECKWL SAFQLRRAYN SFLFWTSPVL
0401: VSAAAFSTCY FLHIPLNPSN VFTFVATLRL VQDPANVEHP VAIEAGSFSW EENTMKPTLR GINLVVKAKE KVAICGEVGS GKSTLLAAIL REIPKTEGMI
0501: QVSGKIAYVS QTAWIQTGSI QDNILFGSAM DQQKYQRTLE KCSLVKDIEM LPFGDLTEIG ERGVNLSGGQ KQRIQLARAL YQDADIYLLD DPFSAVDAHT
0601: ATSLFNEYVM GALAEKTVLL VTHQVDFLPV FDSILLMSDG EVRSAAPYNE LLASSKAFED LVKINSSKKQ EMVKPSGRDQ LIKKEEKESG DTGLKPYKQY
0701: LGQNKGYLYA SISALSHLIF SLFFELMNSL FRAPMSFFDS TPIGRILSRV SSDLSLVDLD VPFSFIFSVS ATLNAYSNLA VLAFVTWPVL FVSIPMVYLT
0801: IRLQRYYLVS AKELMRINGT TKSLVANHLA ESISGATTIR AFEEEDRFFS KSLELIDKNA SPFFHNFAAS EWLIQRLETM SAAIVSSSAL IMALLPPGTF
0901: SSGFVGMALS YGLSLNMSLV FSIQNQCTLA NHIISVERLN QYMHVSSEAP EIVRGNRPPS DWPAIGRVEL RDLKIRYRPE APLVLRGISC TFEGGNKIGI
1001: VGRTGSGKTT LIGALFRLVE PAGGRITIDA LDIATIGLHD LRSRLGIIPQ DPTLFHGSVR YNLDPLGQYT DQQIWEVLDK CQLQEAVQEK HKGPTCTAVV
1101: EDGSNWSMGQ RQLFCLGRAL LRRSRILVLD EATASIDNAT DAILQKTIRT EFADCTVITV AHRIPTVMDC NMVLAISDGK LEEYDEPMKL MEREGSLFGS
1201: LVKEYWSHAA NATIQFTDSH

Best Arabidopsis Sequence Match ( AT3G21250.6 )
(BLAST)

0001: MHIVWENSYG GSTRDGAFRC SFCFLQLYFL EWLVQELFQD KRLRSTSEIL NSMKVIKLQS WEDEFKKKIE SCRDDEFTWL AKAQLTKAFG SFLYWMSPTI
0101: VSSVVFLGCA LLKSAPLNAS TIFTVLATLR VMSEPVKIIP DAISAIIQGN VSFQRLNNFL LDDELKMDEI ERSGLDASGT AVDIQVGNFG WEPETKIPTL
0201: RNIHLEIKHG QKVAVCGPVG AGKSSLLHAV LGEIPKVSGT VKVFGSIAYV SQTSWIQSGT IRDNILYGKP MESRRYNAAI KACALDKDMN GFGHGDLTEI
0301: GQRGINLSGG QKQRIQLARA VYADADVYLL DDPFSAVDAH TAGVLFHKCV EDSLKEKTVI LVTHQVEFLS EVDQILVMEE GTITQSGKYE ELLMMGTAFQ
0401: QLVNAHNDAV TVLPLASNES LGDLRKEGKD REIRNMTVVE KIEEEIEKTD IPGVQLTQEE EKESGYVGMK PFLDYIGVSR GWCLLWSSVL GQVGFVVFQA
0501: ASTYWLAFAI GIPKITNTML IGVYSIISTL SAGFVYARAI TTAHLGLKAS KAFFSGFTNA VFKAPMLFFD STPVGRILTR ASSDLNVLDY DVPFAFIFVV
0601: APAVELTAAL LIMTYVTWQV IIIALLALAA TKVVQDYYLA SARELIRING TTKAPVMNYA AETSLGVVTI RAFGTAERFF KNYLNLVDAD AVLFFLSNAA
0701: MEWVILRIET LQNVTLFTCA LLLILIPKGY IAPGLVGLSL SYALTLTQTQ VFLTRWYCTL SNSIISVERI KQYMNIPEEP PAIIDDKRPP SSWPSNGTIH
0801: LQELKIRYRP NAPLVLKGIS CTFREGTRVG VVGRTGSGKS TLISALFRLV EPASGCILID GIDISKIGLK DLRMKLSIIP QEPTLFRGCI RTNLDPLGVY
0901: SDDEIWKALE KCQLKTTISN LPNKLDSSVS DEGENWSVGQ RQLFCLGRVL LKRNKILVLD EATASIDSAT DAIIQRIIRE EFADCTVITV AHRVPTVIDS
1001: DMVMVLSFGD LVEYNEPSKL METDSYFSKL VAEYWASCRG NSSQNLQL

Arabidopsis Description

MRP6Multidrug resistance-associated protein 6 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LPV5]
SUBAcon: [peroxisome,vacuole,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.