Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 2
- peroxisome 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc05g014390.2.1 | Tomato | cytosol | 15.0 | 71.17 |
| GSMUA_Achr11P... | Banana | golgi | 61.89 | 61.16 |
| VIT_01s0010g02440.t01 | Wine grape | mitochondrion | 36.16 | 59.58 |
| PGSC0003DMT400045009 | Potato | cytosol, peroxisome, plasma membrane | 53.19 | 56.36 |
| Os01t0902100-00 | Rice | plasma membrane | 43.36 | 56.06 |
| TraesCS3D01G387200.1 | Wheat | plasma membrane | 57.76 | 52.88 |
| TraesCS3B01G425500.1 | Wheat | cytosol, peroxisome, plasma membrane | 57.84 | 52.7 |
| OQU86956 | Sorghum | plasma membrane | 56.71 | 52.28 |
| TraesCS3A01G393500.1 | Wheat | cytosol, peroxisome, plasma membrane | 57.84 | 52.24 |
| HORVU3Hr1G088900.8 | Barley | plasma membrane, vacuole | 57.99 | 51.67 |
| KRH42626 | Soybean | plasma membrane | 55.74 | 51.07 |
| PGSC0003DMT400044938 | Potato | plasma membrane | 55.74 | 51.03 |
| KRH58734 | Soybean | plasma membrane | 54.99 | 50.48 |
| Solyc05g014380.2.1 | Tomato | plasma membrane | 38.86 | 45.64 |
| GSMUA_Achr10P... | Banana | plasma membrane | 37.88 | 39.39 |
| GSMUA_Achr8P12730_001 | Banana | plasma membrane | 38.41 | 37.54 |
| GSMUA_Achr10P... | Banana | plasma membrane | 33.68 | 36.8 |
| GSMUA_Achr11P... | Banana | plasma membrane | 38.11 | 34.82 |
| GSMUA_Achr10P... | Banana | plasma membrane | 31.36 | 34.26 |
| GSMUA_Achr2P02280_001 | Banana | cytosol, golgi, plasma membrane | 29.56 | 34.14 |
| GSMUA_Achr6P31980_001 | Banana | plasma membrane | 30.53 | 31.8 |
| GSMUA_Achr8P33250_001 | Banana | endoplasmic reticulum, golgi, plastid | 23.93 | 25.0 |
| GSMUA_Achr7P03410_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 24.38 | 22.34 |
Protein Annotations
| Gene3D:1.20.1560.10 | Gene3D:3.40.50.300 | MapMan:35.1 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | ncoils:Coil | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005215 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 |
| EnsemblPlantsGene:GSMUA_Achr5G25430_001 | EnsemblPlants:GSMUA_Achr5P25430_001 | EnsemblPlants:GSMUA_Achr5T25430_001 | InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 |
| UniProt:M0T1L8 | InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 | PFscan:PS50893 |
| PFscan:PS50929 | PANTHER:PTHR24223 | PANTHER:PTHR24223:SF222 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 |
| TMHMM:TMhelix | UniParc:UPI000294A27A | SEG:seg | : | : | : |
Description
Putative ABC transporter C family member 10 [Source:GMGC_GENE;Acc:GSMUA_Achr5G25430_001]
Coordinates
chr5:-:26442156..26449291
Molecular Weight (calculated)
150180.0 Da
IEP (calculated)
7.792
GRAVY (calculated)
0.178
Length
1333 amino acids
Sequence
(BLAST)
(BLAST)
0001: MIPKSLFEFT TKRAALNPGI PCTTGYHTIW FPLMCISIYR GVSMYHTIWF PPAVVSQSCL SDLILFSSFS FQLLLVEQRG FLVSEACLLT SSMEMMLMDY
0101: LYVVIFSLLF AWILLEFVGS RKSSQKANPE LERSLLSDEH DGVGGDGFTV AGHWSRLTFR WLNPVFEKGR AERLELSHLP GVPPSETAES SFSLLQESLR
0201: GQKPWSTALL GVVVRAVWRP LALNAVIAEG TCSAGINTFA SYLGPLLITN FVGFISGEDS SDGLYNGYGL AALFFLAKTV ESLTQRQWYF GARQIGVRVR
0301: AALMVAIYNK SLAIKHAGAS TGKIVNFLDV DVEKIADFFW YIHGVWLLPL QVTLALLILY RNLGAAASFS ALAVTILVMT LKCMRVLKLH AWETAYLNKL
0401: LEHRNVERSW LRRYLYTCSA IAFLFWASPT LVSVVAFGVC ILVRAPLTAG TVLSALATFR ILQEPIYNLP ELVNMIAQTK IEPGEYTWEA DSMSRTPTLK
0501: IEKKIHIMRG EKVALCGAVG SGKSSFLCSI IGEIPWISGG RRWYREVMEA CALDRDVGAW ADGDLTVVGE RGINLSGGQK QRIQLARAIY NNADIYLLDD
0601: PFSAVDAHTR RHLFKAIRKK FKTMIYVLIT LTNWSIQLQG YCKIRKYIQG KVQEMMECLM GLLSGKTVIY ATHQLEFIDA ADLILVLKDG KVVQSGKYED
0701: LMMDSNGDLV QQIAAHNQSL SQVSPSKEHS SSITTRHRMK QENHVEGLQM GSNYWVAWAT EKEDRLFVGM ITSIIKAPMS FFDSTHTSRI LNRSSTDQST
0801: VDTDIPYRVA GLVFALIQLL CIIILMSQVA WPVLILFIVV FTISIWYQVS EMTILSEKKH FLEHNVHLCN FCYCLIYPNI IVYSINNGLP FHKMSRWLIP
0901: LSCLPILLPF CIPNYYISAA RELARMVGIQ KAPILHHFSE SLAGAATIRS FNQEERFRKR NLTLIDDYSR ITFHNYATME WLSVRINFLF NLVFFAMLTI
1001: LVSMPRNTID PSLAGLAATY GLNLNVLQAW VIWNICNVEN KMISVERILQ FSAIPSEAPL VIEHSRPEEN WPTSGTIELD DLKKIGVVGR TGSGKSTLIQ
1101: TIFRVVEPTS GRIVIDSIDI SRIGLHDLRS RLSIIPQEPT LFQGTVRTNL DPLQQHPDSE IWEALYKCQL GEIVKQDQRL LDAPVNSSNC CRVTFYTFFV
1201: RFRQLKVAVN YDTVAEDGEN WSVGQRQLVC LARVLLDKRR ILVLDEATAS VDTATDNFIQ KTIREITNNC TVITVAHRIP TVIDSDLVLV LDEGKILEFS
1301: SPKELLKDES SAFSKLVIDF LGRSKSNHEL ELE
0101: LYVVIFSLLF AWILLEFVGS RKSSQKANPE LERSLLSDEH DGVGGDGFTV AGHWSRLTFR WLNPVFEKGR AERLELSHLP GVPPSETAES SFSLLQESLR
0201: GQKPWSTALL GVVVRAVWRP LALNAVIAEG TCSAGINTFA SYLGPLLITN FVGFISGEDS SDGLYNGYGL AALFFLAKTV ESLTQRQWYF GARQIGVRVR
0301: AALMVAIYNK SLAIKHAGAS TGKIVNFLDV DVEKIADFFW YIHGVWLLPL QVTLALLILY RNLGAAASFS ALAVTILVMT LKCMRVLKLH AWETAYLNKL
0401: LEHRNVERSW LRRYLYTCSA IAFLFWASPT LVSVVAFGVC ILVRAPLTAG TVLSALATFR ILQEPIYNLP ELVNMIAQTK IEPGEYTWEA DSMSRTPTLK
0501: IEKKIHIMRG EKVALCGAVG SGKSSFLCSI IGEIPWISGG RRWYREVMEA CALDRDVGAW ADGDLTVVGE RGINLSGGQK QRIQLARAIY NNADIYLLDD
0601: PFSAVDAHTR RHLFKAIRKK FKTMIYVLIT LTNWSIQLQG YCKIRKYIQG KVQEMMECLM GLLSGKTVIY ATHQLEFIDA ADLILVLKDG KVVQSGKYED
0701: LMMDSNGDLV QQIAAHNQSL SQVSPSKEHS SSITTRHRMK QENHVEGLQM GSNYWVAWAT EKEDRLFVGM ITSIIKAPMS FFDSTHTSRI LNRSSTDQST
0801: VDTDIPYRVA GLVFALIQLL CIIILMSQVA WPVLILFIVV FTISIWYQVS EMTILSEKKH FLEHNVHLCN FCYCLIYPNI IVYSINNGLP FHKMSRWLIP
0901: LSCLPILLPF CIPNYYISAA RELARMVGIQ KAPILHHFSE SLAGAATIRS FNQEERFRKR NLTLIDDYSR ITFHNYATME WLSVRINFLF NLVFFAMLTI
1001: LVSMPRNTID PSLAGLAATY GLNLNVLQAW VIWNICNVEN KMISVERILQ FSAIPSEAPL VIEHSRPEEN WPTSGTIELD DLKKIGVVGR TGSGKSTLIQ
1101: TIFRVVEPTS GRIVIDSIDI SRIGLHDLRS RLSIIPQEPT LFQGTVRTNL DPLQQHPDSE IWEALYKCQL GEIVKQDQRL LDAPVNSSNC CRVTFYTFFV
1201: RFRQLKVAVN YDTVAEDGEN WSVGQRQLVC LARVLLDKRR ILVLDEATAS VDTATDNFIQ KTIREITNNC TVITVAHRIP TVIDSDLVLV LDEGKILEFS
1301: SPKELLKDES SAFSKLVIDF LGRSKSNHEL ELE
0001: MFKPFGFAAE TGSHLLTTQW LQLGNSLCLK ERISIAMQVT FLAFFLIHLA LKWFGVVRNR GSNDVEEDLK KQSITVKQSF SYNISLLCSV SILGTHCFIL
0101: LLLFRDSVVS RCDSSVSVFS AEVSQSFSWL FVSVVVVKIR ERRLVKFPWM LRSWWLCSFI LSFSFDAHFI TAKHEPLEFQ DYADLTGLLA SLFLLAVSIR
0201: GKTGFHLLES SGNTEPLLLG DQTEQNKKDS YSSSSPYGNA TLFQRITFSW INPLFSLGYK RPLEKDDVPD IDVKDSARFC SHAFDQKLKT TKEKEGPGNA
0301: FFYNSVLRYV WRKAAINAVF AVVNASTAYI GPYLINDFVE FLSEKQSQSL NHGYLLALGF LTAKIVETVT QRQWIFGARQ LGLRLRAALI SHIYQKGLVL
0401: SSQSRQSHTS GEIINYMSVD VQRITDFIWY VNNIWMLPIQ IFSAIYILQK HLGLGALAAL VTTLMVMACN YPLTRLQRNY QSDIMNAKDD RMKATSEILK
0501: NMKILKLQAW DNQFLNKVKT LRKKEYDCLW KSLRLQAFTT FILWGAPSLI SVVTFVTCML MGVKLTAGAV LSALATFQML QSPIFGLPDL LSALVQSKVS
0601: ADRIASYLQQ SETQKDAVEY CSKDHTELSV EIENGAFSWE PESSRPTLDD IELKVKSGMK VAVCGAVGSG KSSLLSSILG EIQKLKGTVR VSGKQAYVPQ
0701: SPWILSGTIR DNILFGSMYE SEKYERTVKA CALIKDFELF SNGDLTEIGE RGINMSGGQK QRIQIARAVY QNADIYLLDD PFSAVDAHTG RELFEDCLMG
0801: ILKDKTVLYV THQVEFLPAA DLILVMQNGR VMQAGKFEEL LKQNIGFEVL VGAHNEALDS ILSIEKSSRN FKEGSKDDTA SIAESLQTHC DSEHNISTEN
0901: KKKEAKLVQD EETEKGVIGK EVYLAYLTTV KGGLLVPFII LAQSCFQMLQ IASNYWMAWT APPTAESIPK LGMGRILLVY ALLAAGSSLC VLARTILVAI
1001: GGLSTAETFF SRMLCSIFRA PMSFFDSTPT GRILNRASTD QSVLDLEMAV KLGWCAFSII QIVGTIFVMS QVAWQVCVIF IPVAVACVFY QRYYTPTARE
1101: LSRMSGVERA PILHHFAESL AGATTIRAFD QRDRFISSNL VLIDSHSRPW FHVASAMEWL SFRLNLLSHF VFAFSLVLLV TLPEGVINPS IAGLGVTYGL
1201: SLNVLQATVI WNICNAENKM ISVERILQYS KIPSEAPLVI DGHRPLDNWP NVGSIVFRDL QVRYAEHFPA VLKNITCEFP GGKKIGVVGR TGSGKSTLIQ
1301: ALFRIVEPSQ GTIVIDNVDI TKIGLHDLRS RLGIIPQDPA LFDGTIRLNL DPLAQYTDHE IWEAIDKCQL GDVIRAKDER LDATVVENGE NWSVGQRQLV
1401: CLGRVLLKKS NILVLDEATA SVDSATDGVI QKIINQEFKD RTVVTIAHRI HTVIESDLVL VLSDGRIAEF DSPAKLLQRE DSFFSKLIKE YSLRSNHFAG
1501: SNDLLS
0101: LLLFRDSVVS RCDSSVSVFS AEVSQSFSWL FVSVVVVKIR ERRLVKFPWM LRSWWLCSFI LSFSFDAHFI TAKHEPLEFQ DYADLTGLLA SLFLLAVSIR
0201: GKTGFHLLES SGNTEPLLLG DQTEQNKKDS YSSSSPYGNA TLFQRITFSW INPLFSLGYK RPLEKDDVPD IDVKDSARFC SHAFDQKLKT TKEKEGPGNA
0301: FFYNSVLRYV WRKAAINAVF AVVNASTAYI GPYLINDFVE FLSEKQSQSL NHGYLLALGF LTAKIVETVT QRQWIFGARQ LGLRLRAALI SHIYQKGLVL
0401: SSQSRQSHTS GEIINYMSVD VQRITDFIWY VNNIWMLPIQ IFSAIYILQK HLGLGALAAL VTTLMVMACN YPLTRLQRNY QSDIMNAKDD RMKATSEILK
0501: NMKILKLQAW DNQFLNKVKT LRKKEYDCLW KSLRLQAFTT FILWGAPSLI SVVTFVTCML MGVKLTAGAV LSALATFQML QSPIFGLPDL LSALVQSKVS
0601: ADRIASYLQQ SETQKDAVEY CSKDHTELSV EIENGAFSWE PESSRPTLDD IELKVKSGMK VAVCGAVGSG KSSLLSSILG EIQKLKGTVR VSGKQAYVPQ
0701: SPWILSGTIR DNILFGSMYE SEKYERTVKA CALIKDFELF SNGDLTEIGE RGINMSGGQK QRIQIARAVY QNADIYLLDD PFSAVDAHTG RELFEDCLMG
0801: ILKDKTVLYV THQVEFLPAA DLILVMQNGR VMQAGKFEEL LKQNIGFEVL VGAHNEALDS ILSIEKSSRN FKEGSKDDTA SIAESLQTHC DSEHNISTEN
0901: KKKEAKLVQD EETEKGVIGK EVYLAYLTTV KGGLLVPFII LAQSCFQMLQ IASNYWMAWT APPTAESIPK LGMGRILLVY ALLAAGSSLC VLARTILVAI
1001: GGLSTAETFF SRMLCSIFRA PMSFFDSTPT GRILNRASTD QSVLDLEMAV KLGWCAFSII QIVGTIFVMS QVAWQVCVIF IPVAVACVFY QRYYTPTARE
1101: LSRMSGVERA PILHHFAESL AGATTIRAFD QRDRFISSNL VLIDSHSRPW FHVASAMEWL SFRLNLLSHF VFAFSLVLLV TLPEGVINPS IAGLGVTYGL
1201: SLNVLQATVI WNICNAENKM ISVERILQYS KIPSEAPLVI DGHRPLDNWP NVGSIVFRDL QVRYAEHFPA VLKNITCEFP GGKKIGVVGR TGSGKSTLIQ
1301: ALFRIVEPSQ GTIVIDNVDI TKIGLHDLRS RLGIIPQDPA LFDGTIRLNL DPLAQYTDHE IWEAIDKCQL GDVIRAKDER LDATVVENGE NWSVGQRQLV
1401: CLGRVLLKKS NILVLDEATA SVDSATDGVI QKIINQEFKD RTVVTIAHRI HTVIESDLVL VLSDGRIAEF DSPAKLLQRE DSFFSKLIKE YSLRSNHFAG
1501: SNDLLS
Arabidopsis Description
ABCC9ABC transporter C family member 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9M1C7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.