Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr10P... | Banana | plasma membrane | 63.83 | 66.97 |
| KRG91620 | Soybean | plasma membrane | 57.97 | 59.84 |
| CDX71911 | Canola | plasma membrane | 52.58 | 58.02 |
| CDY06021 | Canola | plasma membrane | 52.73 | 57.99 |
| VIT_16s0050g02480.t01 | Wine grape | plasma membrane | 64.69 | 55.95 |
| PGSC0003DMT400023487 | Potato | plasma membrane | 62.89 | 54.91 |
| Solyc03g007530.2.1 | Tomato | plasma membrane | 62.73 | 54.74 |
| VIT_16s0050g02280.t01 | Wine grape | cytosol, golgi, plasma membrane | 55.31 | 54.25 |
| KRH35194 | Soybean | endoplasmic reticulum, nucleus, plasma membrane | 62.66 | 54.23 |
| AT3G59140.1 | Thale cress | plasma membrane | 59.92 | 52.79 |
| Solyc06g036490.1.1 | Tomato | plastid | 48.91 | 52.47 |
| Bra007434.1-P | Field mustard | golgi, plasma membrane, plastid | 59.45 | 52.45 |
| KRH08764 | Soybean | plasma membrane | 60.55 | 52.33 |
| VIT_02s0025g00930.t01 | Wine grape | plasma membrane | 55.55 | 50.68 |
| KRH08755 | Soybean | plasma membrane | 59.3 | 50.5 |
| PGSC0003DMT400074333 | Potato | mitochondrion | 60.39 | 50.06 |
| VIT_02s0025g00970.t01 | Wine grape | plasma membrane | 58.12 | 49.93 |
| PGSC0003DMT400018927 | Potato | plasma membrane | 48.83 | 49.49 |
| VIT_02s0025g00950.t01 | Wine grape | plasma membrane | 56.88 | 49.26 |
| Solyc08g081890.2.1 | Tomato | endoplasmic reticulum, nucleus, plasma membrane | 54.84 | 47.46 |
| GSMUA_Achr10P... | Banana | plasma membrane | 39.61 | 41.56 |
| GSMUA_Achr2P02280_001 | Banana | cytosol, golgi, plasma membrane | 32.66 | 36.22 |
| GSMUA_Achr10P... | Banana | plasma membrane | 35.7 | 35.65 |
| GSMUA_Achr8P12730_001 | Banana | plasma membrane | 37.5 | 35.19 |
| GSMUA_Achr11P... | Banana | plasma membrane | 37.89 | 33.24 |
| GSMUA_Achr5P25430_001 | Banana | plasma membrane | 31.8 | 30.53 |
| GSMUA_Achr11P... | Banana | golgi | 32.11 | 30.47 |
| GSMUA_Achr8P33250_001 | Banana | endoplasmic reticulum, golgi, plastid | 27.34 | 27.43 |
| GSMUA_Achr7P03410_001 | Banana | endoplasmic reticulum, plasma membrane, plastid | 26.64 | 23.44 |
Protein Annotations
| Gene3D:1.20.1560.10 | MapMan:24.1.3.1.2 | Gene3D:3.40.50.300 | InterPro:AAA+_ATPase | InterPro:ABC1_TM_dom | InterPro:ABC1_TM_sf |
| InterPro:ABC_transporter-like | InterPro:ABC_transporter_CS | GO:GO:0000166 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005215 |
| GO:GO:0005488 | GO:GO:0005524 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016787 | GO:GO:0016887 | GO:GO:0042626 | GO:GO:0055085 | EnsemblPlantsGene:GSMUA_Achr6G31980_001 |
| EnsemblPlants:GSMUA_Achr6P31980_001 | EnsemblPlants:GSMUA_Achr6T31980_001 | InterPro:IPR003439 | InterPro:IPR011527 | InterPro:IPR036640 | UniProt:M0TBZ3 |
| InterPro:P-loop_NTPase | PFAM:PF00005 | PFAM:PF00664 | ScanProsite:PS00211 | PFscan:PS50893 | PFscan:PS50929 |
| PANTHER:PTHR24223 | PANTHER:PTHR24223:SF192 | SMART:SM00382 | SUPFAM:SSF52540 | SUPFAM:SSF90123 | TMHMM:TMhelix |
| UniParc:UPI000295906C | SEG:seg | : | : | : | : |
Description
ABC transporter C family member 10 [Source:GMGC_GENE;Acc:GSMUA_Achr6G31980_001]
Coordinates
chr6:-:31554384..31562259
Molecular Weight (calculated)
142507.0 Da
IEP (calculated)
7.307
GRAVY (calculated)
0.186
Length
1280 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAFCGGNICS DLAGANCGLG GILYSNTCVN HFFVMLINVL LVFSFFLNFA HKVSCGVGTM ERSFWSLSPV RISSLIFSGL LGLAYIGLGL WKLEEKLRKG
0101: EGFFPLHWWL LVFSQGFTWV AMCLAVSIRA KHLGNTFVRL WSGLASTTLL LFCTCNGSKA KEDQESSEES IYAPLNSKYS AKSSHPVELI TPFAHAGFLS
0201: RVSFWWLNPL MKQGYKKPLE EKDVPQLGEL DSAESLCSLF LERLNNQKQN NQASSSSYLW IIVSCHKKEI FSSVSAGLGN FQQWQFRTRM LGLKVRSLLS
0301: AAIFQKQLRL VGEFPVWFHQ MWTIVIQLGI ALVILYHAVG FAMDERLKSM SEALVNMKVL KLYAWDTHFK EVIEGLRAKE CKWLSAFQLQ RAYNTFLFWS
0401: SPVAVSAATF LACYLFEIPL YPSNVFTFVA TLRLIQDPVR SIPDVIGASA SFSWDRNPSK PTLENINLEL KPGEKAAICG EVGSGKSTLL EAILGEIPNT
0501: EGMIQVCGKI AYVSQNAWIQ TGSVQDNILF GSVMDRQRYH ETIEKCSLVK DFEMLPLGDL TEIGERGVNL SGGQKQRIQL ARALYQDADI YLLDDPFSAV
0601: DAQTATDLFN EYVMGALLAK TVLLVTHKVD FLQAFDPILV VNPFYIDIQD LVGSVPVLNI LNPFYVSLLS KNIGICSVSR PLMSDGKILH AAPYHELLAS
0701: SEVFQKLTNA HKGIQSMAKL TGEDQLIKKE EREKGDTGLK PYLQYLNQNK GFLYFSLAAL SHLIFMAGQI SQNSWMAANS SKSLFIQLLN SLLHAPMSFF
0801: DSTPLGRILT RVSADTSIVD IDVPFSLIFS ISASINIYCN LGVLIAVTWQ VLFVSIPMIY LTIRLQGYYL ASAKELMRIN GTTKSLVANH LAESISGAII
0901: IRAYEEEDRF FTMFLKLVDR NASPFFHNFS ASEWLIQRLE TMGAVVLSTS ALLMALLPAG TFSSGFVGMA LSYGFSLNMS LVFASQNQCI LANNIVSVER
1001: LNQYMHITRE ASEIVEGNRP PPNWPVLGRV VLQDLKIRYR PDTPLILKGI NCTFEGGHKI GIVGRTGSGK STLIGALFRI VEPAGGKIII DDIDIVTIGL
1101: HDLRSRFAVI PQDPTLFHGS VRYNLDPLSQ YTDQQIWEVL DKCQLREVVQ EKEHGLDSLV VEDGSNWSMG QRQLFCLGRA LLRRSRILVL DEATASIDNA
1201: TDAILQKTIR REFADCTVIT VAHRILTVVD CTMVLAISEG KVAEYDCPLK LMKTKGSLLG ELVKEYWSHT SASSIRATDS
0101: EGFFPLHWWL LVFSQGFTWV AMCLAVSIRA KHLGNTFVRL WSGLASTTLL LFCTCNGSKA KEDQESSEES IYAPLNSKYS AKSSHPVELI TPFAHAGFLS
0201: RVSFWWLNPL MKQGYKKPLE EKDVPQLGEL DSAESLCSLF LERLNNQKQN NQASSSSYLW IIVSCHKKEI FSSVSAGLGN FQQWQFRTRM LGLKVRSLLS
0301: AAIFQKQLRL VGEFPVWFHQ MWTIVIQLGI ALVILYHAVG FAMDERLKSM SEALVNMKVL KLYAWDTHFK EVIEGLRAKE CKWLSAFQLQ RAYNTFLFWS
0401: SPVAVSAATF LACYLFEIPL YPSNVFTFVA TLRLIQDPVR SIPDVIGASA SFSWDRNPSK PTLENINLEL KPGEKAAICG EVGSGKSTLL EAILGEIPNT
0501: EGMIQVCGKI AYVSQNAWIQ TGSVQDNILF GSVMDRQRYH ETIEKCSLVK DFEMLPLGDL TEIGERGVNL SGGQKQRIQL ARALYQDADI YLLDDPFSAV
0601: DAQTATDLFN EYVMGALLAK TVLLVTHKVD FLQAFDPILV VNPFYIDIQD LVGSVPVLNI LNPFYVSLLS KNIGICSVSR PLMSDGKILH AAPYHELLAS
0701: SEVFQKLTNA HKGIQSMAKL TGEDQLIKKE EREKGDTGLK PYLQYLNQNK GFLYFSLAAL SHLIFMAGQI SQNSWMAANS SKSLFIQLLN SLLHAPMSFF
0801: DSTPLGRILT RVSADTSIVD IDVPFSLIFS ISASINIYCN LGVLIAVTWQ VLFVSIPMIY LTIRLQGYYL ASAKELMRIN GTTKSLVANH LAESISGAII
0901: IRAYEEEDRF FTMFLKLVDR NASPFFHNFS ASEWLIQRLE TMGAVVLSTS ALLMALLPAG TFSSGFVGMA LSYGFSLNMS LVFASQNQCI LANNIVSVER
1001: LNQYMHITRE ASEIVEGNRP PPNWPVLGRV VLQDLKIRYR PDTPLILKGI NCTFEGGHKI GIVGRTGSGK STLIGALFRI VEPAGGKIII DDIDIVTIGL
1101: HDLRSRFAVI PQDPTLFHGS VRYNLDPLSQ YTDQQIWEVL DKCQLREVVQ EKEHGLDSLV VEDGSNWSMG QRQLFCLGRA LLRRSRILVL DEATASIDNA
1201: TDAILQKTIR REFADCTVIT VAHRILTVVD CTMVLAISEG KVAEYDCPLK LMKTKGSLLG ELVKEYWSHT SASSIRATDS
0001: MIENYWTSFC GNHHTSSNCT VRFLQICFGI TLSFLTLCIC LFHKEPPKRI HQFFCLRLVS ALFNGIIGSL DLVLGIWVLR ENHSKPLILW LVILIQGFTW
0101: LFINLIICVR GTRIRKSSLR LLSIFSFFYG LVSSCLSVNN AVFGDELAVR TILDVLLLPG SVLLLLSAYK GYRFDESGES SLYEPLNAGD SNGFSEKADF
0201: DNRVSQFAKA GLFSTLSFWW LNSLIKRGNV KDLEEEDIPE LRKEERAETC YSLFEENLIE QKRRLGSSCQ PSILKVTVLC VWRELLTSGF FAFMKIVAVS
0301: AGPLLLNAFI LVAEGNASFR YEGLVLAVLL FFSKMIESLS QRQWYFRCRI VGLRVRSLLT AAINKKQLRL NNSSRLIHSG SEIMNYATVD AYRIGEFPYW
0401: FHQLWTTSFQ LLIALGILFH SVGVATFSAL AVIILTVLCN APIAKLQNKF QSELMTSQDE RLKACNESLV NMKVLKLYAW ESHFKKVIEK LRNIELKSLK
0501: AVQMRKAYNA VLFWSSPVFV SAATFATCYF LDIPLRASNV FTFVATLRLV QDPVRMIPDV IGVTIQAKVA FSRIATFLEA PELQGGERRR KQRSEGNQNA
0601: IIIKSASFSW EEKGSTKPNL RNVSLEVKFG EKVAVCGEVG SGKSTLLAAI LGETPCVSGT IDFYGTIAYV SQTAWIQTGT IRDNILFGGV MDEHRYRETI
0701: QKSSLDKDLE LLPDGDQTEI GERGVNLSGG QKQRIQLARA LYQDADIYLL DDPFSAVDAH TASSLFQEYV MDALAGKAVL LVTHQVDFLP AFDSVLLMSD
0801: GEITEADTYQ ELLARSRDFQ DLVNAHRETA GSERVVAVEN PTKPVKEINR VISSQSKVLK PSRLIKQEER EKGDTGLRPY IQYMNQNKGY IFFFIASLAQ
0901: VTFAVGQILQ NSWMAANVDN PQVSTLKLIL VYLLIGLCSV LCLMVRSVCV VIMCMKSSAS LFSQLLNSLF RAPMSFYDST PLGRILSRVS SDLSIVDLDV
1001: PFGLIFVVAS SVNTGCSLGV LAIVTWQVLF VSVPMVYLAF RLQKYYFQTA KELMRINGTT RSYVANHLAE SVAGAITIRA FDEEERFFKK SLTLIDTNAS
1101: PFFHSFAANE WLIQRLETVS AIVLASTAFC MILLPTGTFS SGFIGMALSY GLSLNMGLVY SVQNQCYLAN WIISVERLNQ YTHLTPEAPE VIEETRPPVN
1201: WPVTGRVEIS DLQIRYRRES PLVLKGISCT FEGGHKIGIV GRTGSGKTTL ISALFRLVEP VGGKIVVDGV DISKIGVHDL RSRFGIIPQD PTLFNGTVRF
1301: NLDPLCQHSD AEIWEVLGKC QLKEVVQEKE NGLDSLVVED GSNWSMGQRQ LFCLGRAVLR RSRVLVLDEA TASIDNATDL ILQKTIRREF ADCTVITVAH
1401: RIPTVMDCTM VLSISDGRIV EYDEPMKLMK DENSLFGKLV KEYWSHYNSA DSR
0101: LFINLIICVR GTRIRKSSLR LLSIFSFFYG LVSSCLSVNN AVFGDELAVR TILDVLLLPG SVLLLLSAYK GYRFDESGES SLYEPLNAGD SNGFSEKADF
0201: DNRVSQFAKA GLFSTLSFWW LNSLIKRGNV KDLEEEDIPE LRKEERAETC YSLFEENLIE QKRRLGSSCQ PSILKVTVLC VWRELLTSGF FAFMKIVAVS
0301: AGPLLLNAFI LVAEGNASFR YEGLVLAVLL FFSKMIESLS QRQWYFRCRI VGLRVRSLLT AAINKKQLRL NNSSRLIHSG SEIMNYATVD AYRIGEFPYW
0401: FHQLWTTSFQ LLIALGILFH SVGVATFSAL AVIILTVLCN APIAKLQNKF QSELMTSQDE RLKACNESLV NMKVLKLYAW ESHFKKVIEK LRNIELKSLK
0501: AVQMRKAYNA VLFWSSPVFV SAATFATCYF LDIPLRASNV FTFVATLRLV QDPVRMIPDV IGVTIQAKVA FSRIATFLEA PELQGGERRR KQRSEGNQNA
0601: IIIKSASFSW EEKGSTKPNL RNVSLEVKFG EKVAVCGEVG SGKSTLLAAI LGETPCVSGT IDFYGTIAYV SQTAWIQTGT IRDNILFGGV MDEHRYRETI
0701: QKSSLDKDLE LLPDGDQTEI GERGVNLSGG QKQRIQLARA LYQDADIYLL DDPFSAVDAH TASSLFQEYV MDALAGKAVL LVTHQVDFLP AFDSVLLMSD
0801: GEITEADTYQ ELLARSRDFQ DLVNAHRETA GSERVVAVEN PTKPVKEINR VISSQSKVLK PSRLIKQEER EKGDTGLRPY IQYMNQNKGY IFFFIASLAQ
0901: VTFAVGQILQ NSWMAANVDN PQVSTLKLIL VYLLIGLCSV LCLMVRSVCV VIMCMKSSAS LFSQLLNSLF RAPMSFYDST PLGRILSRVS SDLSIVDLDV
1001: PFGLIFVVAS SVNTGCSLGV LAIVTWQVLF VSVPMVYLAF RLQKYYFQTA KELMRINGTT RSYVANHLAE SVAGAITIRA FDEEERFFKK SLTLIDTNAS
1101: PFFHSFAANE WLIQRLETVS AIVLASTAFC MILLPTGTFS SGFIGMALSY GLSLNMGLVY SVQNQCYLAN WIISVERLNQ YTHLTPEAPE VIEETRPPVN
1201: WPVTGRVEIS DLQIRYRRES PLVLKGISCT FEGGHKIGIV GRTGSGKTTL ISALFRLVEP VGGKIVVDGV DISKIGVHDL RSRFGIIPQD PTLFNGTVRF
1301: NLDPLCQHSD AEIWEVLGKC QLKEVVQEKE NGLDSLVVED GSNWSMGQRQ LFCLGRAVLR RSRVLVLDEA TASIDNATDL ILQKTIRREF ADCTVITVAH
1401: RIPTVMDCTM VLSISDGRIV EYDEPMKLMK DENSLFGKLV KEYWSHYNSA DSR
Arabidopsis Description
ABCC10ABC transporter C family member 10 [Source:UniProtKB/Swiss-Prot;Acc:Q9LYS2]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.